Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sall3b

Gene Name Gene ID Reads Annotation
sall3b ENSDARG00000057586 982 spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]










Genes with expression patterns similar to sall3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sall3b ENSDARG00000057586 982 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
2. dpysl5a ENSDARG00000011141 1827 3.472 0.738 0.931 - - - 0.837 0.966 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
3. SNAP91 ENSDARG00000098809 556 3.47 0.704 0.863 - - - 0.911 0.992 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
4. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 3.35 0.741 0.975 - - - 0.824 0.810 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
5. st18 663 3.311 0.799 0.785 - - - 0.796 0.931 - - suppression of tumorigenicity 18, zinc finger
6. atp1b4 ENSDARG00000053262 1337 3.197 0.723 0.874 - - - 0.786 0.814 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
7. si:ch73-21g5.7 ENSDARG00000093156 9412 3.159 0.713 0.767 - - - 0.714 0.965 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
8. CU928222.1 ENSDARG00000097436 1662 3.156 0.779 0.729 - - - 0.728 0.920 - -
9. dnm1a ENSDARG00000010042 43 3.095 0.704 0.880 - - - 0.729 0.782 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
10. ncana 1537 3.069 0.762 - - - 0.702 0.778 0.827 - - neurocan a
11. hnrnpa3 ENSDARG00000059351 453 2.982 0.764 - - 0.717 - 0.725 0.776 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
12. nell2b ENSDARG00000062797 854 2.875 - 0.967 - - - 0.939 0.969 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
13. cadpsb ENSDARG00000070567 458 2.788 - 0.956 - - - 0.876 0.956 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
14. slc12a5b ENSDARG00000078187 329 2.776 - 0.920 - - - 0.927 0.929 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
15. fbxo41 ENSDARG00000078908 95 2.769 - 0.920 - - - 0.914 0.935 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
16. slc32a1 ENSDARG00000059775 1092 2.748 - 0.887 - - - 0.908 0.953 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
17. lrrc4.1 ENSDARG00000069402 323 2.739 - 0.859 - - - 0.902 0.978 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
18. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.726 - 0.920 - - - 0.826 0.980 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
19. zgc:194665 ENSDARG00000004577 136 2.719 - 0.920 - - - 0.906 0.893 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
20. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 2.7 - 0.920 - - - 0.836 0.944 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
21. cers6 ENSDARG00000053583 247 2.697 - 0.917 - - - 0.797 0.983 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
22. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.696 - 0.889 - - - 0.890 0.917 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
23. SKOR2 SKOR2 1041 2.689 - 0.878 - - - 0.878 0.933 - -
24. adam23a ENSDARG00000062323 580 2.689 - 0.878 - - - 0.897 0.914 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
25. itm2ca ENSDARG00000043448 1265 2.683 - 0.747 - - - 0.939 0.997 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
26. evlb ENSDARG00000099720 245 2.669 - 0.920 - - - 0.887 0.862 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
27. cspg5a ENSDARG00000069981 1699 2.668 - 0.786 - - - 0.914 0.968 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
28. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.665 - 0.789 - - - 0.898 0.978 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
29. vsnl1a ENSDARG00000023228 1584 2.654 - 0.893 - - - 0.856 0.905 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
30. sprn ENSDARG00000056004 128 2.652 - 0.920 - - - 0.847 0.885 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
31. nadl1.1 1200 2.649 - 0.738 - - - 0.925 0.986 - - neural adhesion molecule L1.1, transcript variant X1
32. Mar-09 Mar-09 126 2.641 - 0.920 - - - 0.738 0.983 - -
33. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.635 0.754 - - - - 0.904 0.977 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
34. GADD45G GADD45G 382 2.628 - 0.920 - - - 0.746 0.962 - -
35. nmnat2 ENSDARG00000004580 370 2.626 - 0.969 - - - 0.858 0.799 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
36. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.623 - 0.733 - - - 0.906 0.984 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
37. scn8aa ENSDARG00000005775 792 2.622 - 0.757 - - - 0.963 0.902 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
38. Sep-03 Sep-03 1124 2.62 - - - 0.785 - 0.938 0.897 - -
39. dpysl5b ENSDARG00000059311 600 2.619 - 0.878 - - - 0.895 0.846 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
40. nova2 ENSDARG00000017673 7685 2.618 - 0.726 - - - 0.949 0.943 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
41. fstl5 ENSDARG00000040198 213 2.615 - 0.920 - - - 0.876 0.819 - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
42. clstn1 ENSDARG00000031720 5286 2.61 0.788 - - - - 0.913 0.909 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
43. atp2b3b ENSDARG00000023445 1424 2.606 - 0.907 - - - 0.784 0.915 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
44. BX957337.1 BX957337.1 1685 2.605 - 0.814 - - - 0.823 0.968 - -
45. neurog1 ENSDARG00000056130 3924 2.602 0.760 - - - - 0.873 0.969 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
46. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.598 - 0.778 - - - 0.924 0.896 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
47. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.592 - 0.920 - - - 0.716 0.956 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
48. epha4b ENSDARG00000011600 3110 2.586 0.706 - - - - 0.927 0.953 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
49. chat chat 463 2.585 0.819 - - - - 0.812 0.954 - -
50. scn1bb ENSDARG00000105003 239 2.583 - 0.734 - - - 0.861 0.988 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
51. pcsk1nl ENSDARG00000076170 1232 2.576 - 0.781 - - - 0.803 0.992 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
52. slc18a3a ENSDARG00000006356 1285 2.574 0.704 - - - - 0.896 0.974 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
53. thsd7a thsd7a 194 2.573 - 0.827 - - - 0.774 0.972 - -
54. stmn2b ENSDARG00000070537 1586 2.57 - 0.833 - - - 0.938 0.799 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
55. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.564 - 0.870 - - - 0.856 0.838 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
56. myt1b ENSDARG00000102879 5411 2.56 - 0.767 - - - 0.890 0.903 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
57. rab39b rab39b 449 2.559 - 0.722 - - - 0.904 0.933 - -
58. RNF208 ENSDARG00000078056 60 2.555 0.748 - - - - 0.902 0.905 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
59. atp6v0a1b ENSDARG00000015174 1052 2.55 0.772 - - - - 0.966 0.812 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
60. trim36 ENSDARG00000062794 785 2.54 - - - 0.719 - 0.879 0.942 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
61. calca ENSDARG00000056590 150 2.538 0.759 - - - - 0.799 0.980 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
62. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.537 - 0.783 - - - 0.908 0.846 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
63. GALNT16 ENSDARG00000053190 250 2.535 0.807 0.919 - - - 0.809 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
64. SLC5A7 SLC5A7 453 2.527 0.728 0.806 - - - - 0.993 - -
65. CHL1 CHL1 1553 2.521 - 0.764 - - - 0.903 0.854 - -
66. AGO1 ENSDARG00000092644 4521 2.518 0.708 - - - - 0.893 0.917 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
67. ADAMTS3 ENSDARG00000060127 2839 2.516 0.795 0.835 - - - - 0.886 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
68. jag1a ENSDARG00000030289 1275 2.508 - 0.746 - - - 0.882 0.880 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
69. ctnnd2b ENSDARG00000003779 964 2.506 - 0.730 - - - 0.845 0.931 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
70. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.504 0.709 - - - - 0.830 0.965 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
71. rheb ENSDARG00000090213 1432 2.503 - 0.768 - - - 0.892 0.843 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
72. mir10d-1 mir10d-1 860 2.498 0.734 - - - - 0.816 0.948 - -
73. mapk12b ENSDARG00000006409 2246 2.494 - 0.809 - - - 0.720 0.965 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
74. nrcam nrcam 397 2.482 - 0.920 - - - 0.732 0.830 - -
75. TUSC5 TUSC5 1436 2.481 - 0.752 - - - 0.803 0.926 - -
76. phactr3a ENSDARG00000058243 150 2.466 - - - 0.708 - 0.812 0.946 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
77. GABRG1 ENSDARG00000101995 201 2.454 - 0.731 - - - 0.747 0.976 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
78. zic4 ENSDARG00000031307 1228 2.453 - 0.743 - - - 0.858 0.852 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
79. vim ENSDARG00000010008 3551 2.448 0.740 - - - - 0.900 0.808 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
80. tmem178b ENSDARG00000006747 173 2.447 - 0.789 - - - 0.811 0.847 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
81. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.444 0.745 - - - - 0.876 0.823 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
82. syt12 ENSDARG00000101776 215 2.426 - 0.747 - - - 0.764 0.915 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
83. RAB39B RAB39B 482 2.42 - 0.752 - - - 0.832 0.836 - -
84. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.413 - 0.839 - - - 0.825 0.749 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
85. foxb1a ENSDARG00000089042 101 2.404 0.769 0.859 - - - - 0.776 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
86. CBFA2T3 ENSDARG00000079012 6799 2.399 - - - 0.758 - 0.839 0.802 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
87. hoxa5a ENSDARG00000102501 1667 2.396 0.792 - - - - 0.747 0.857 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
88. gdf11 ENSDARG00000044924 534 2.382 - 0.747 - - - 0.757 0.878 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
89. pax3a ENSDARG00000010192 626 2.369 - 0.743 - - - 0.790 0.836 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
90. rbfox1 ENSDARG00000014746 2808 2.353 0.750 - - - - 0.880 0.723 - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
91. eml1 ENSDARG00000042840 569 2.353 - 0.773 - - - 0.743 0.837 - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
92. mapk11 ENSDARG00000045836 846 2.329 - 0.775 - - - 0.836 0.718 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
93. AP3B2 1874 2.323 - 0.760 - - - 0.818 0.745 - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
94. hoxa2b ENSDARG00000023031 706 2.286 0.748 - - - - 0.735 0.803 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
95. gad2 ENSDARG00000015537 724 2.285 0.732 - - - - 0.740 0.813 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
96. nkx6.1 ENSDARG00000022569 3779 2.279 0.705 0.720 - - - - 0.854 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
97. lbx1b ENSDARG00000018611 399 2.273 - 0.760 - 0.742 - 0.771 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
98. PEX5L PEX5L 179 2.268 - 0.796 - - - 0.728 0.744 - -
99. BAI1 BAI1 173 2.264 - 0.747 - - - 0.718 0.799 - -
100. mnx2b ENSDARG00000030350 484 2.236 - 0.711 - - - 0.719 0.806 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]

There are 2101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA