Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sall1a

Gene Name Gene ID Reads Annotation
sall1a ENSDARG00000074319, ENSDARG00000111696 1486 spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]










Genes with expression patterns similar to sall1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sall1a ENSDARG00000074319, ENSDARG00000111696 1486 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]
2. msi1 ENSDARG00000010710 2634 2.55 0.765 - - - - 0.894 0.891 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
3. myt1b ENSDARG00000102879 5411 2.523 - - 0.755 - - 0.878 0.890 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
4. nrarpb ENSDARG00000018958 6225 2.478 - - - - - 0.847 0.923 - 0.708 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
5. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.447 0.799 - - - - 0.777 0.871 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
6. kcnc3a ENSDARG00000055855 1821 2.446 0.749 - - - - 0.835 0.862 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
7. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.432 - 0.867 - - - 0.765 0.800 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
8. SPOCK1 ENSDARG00000074644 794 2.431 - - 0.704 - - 0.816 0.911 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
9. epha4b ENSDARG00000011600 3110 2.422 - 0.715 - - - 0.851 0.856 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
10. ZFHX3 ENSDARG00000103057 7759 2.418 - - 0.701 - - 0.858 0.859 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
11. nbeaa ENSDARG00000070080 862 2.412 - - 0.751 - - 0.800 0.861 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
12. CHL1 CHL1 1553 2.396 - - - - - 0.848 0.829 0.719 -
13. atp1b4 ENSDARG00000053262 1337 2.392 0.705 - - - - 0.787 0.900 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
14. C7H4orf48 C7H4orf48 1455 2.391 - 0.737 - - - 0.763 0.891 - -
15. gdf11 ENSDARG00000044924 534 2.375 - - 0.753 - - 0.783 0.839 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
16. mir10d-1 mir10d-1 860 2.367 0.706 - - - - 0.824 0.837 - -
17. elavl4 ENSDARG00000045639 998 2.355 - - 0.720 - - 0.760 0.875 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
18. her12 ENSDARG00000032963 754 2.306 0.702 - - - - 0.730 0.874 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
19. hoxa5a ENSDARG00000102501 1667 2.297 0.731 - - - - 0.762 0.804 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
20. SSBP4 ENSDARG00000056483 5156 2.25 0.719 - 0.731 - - - 0.800 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
21. slc18a3a ENSDARG00000006356 1285 1.829 - - - - - 0.912 0.917 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
22. nova2 ENSDARG00000017673 7685 1.822 - - - - - 0.897 0.925 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
23. tmem35 ENSDARG00000052567 5685 1.817 - - - - - 0.898 0.919 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
24. nes ENSDARG00000088805 2710 1.814 - - - - - 0.881 0.933 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
25. TUBA1A ENSDARG00000001889 25294 1.809 - - - - - 0.887 0.922 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
26. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.808 - - - - - 0.891 0.917 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
27. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.802 - - - - - 0.884 0.918 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
28. chat chat 463 1.799 - - - - - 0.893 0.906 - -
29. nadl1.1 1200 1.796 - - - - - 0.890 0.906 - - neural adhesion molecule L1.1, transcript variant X1
30. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.79 - - - - - 0.901 0.889 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
31. neurog1 ENSDARG00000056130 3924 1.789 - - - - - 0.879 0.910 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
32. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.789 - - - - - 0.889 0.900 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
33. atp6v0cb ENSDARG00000036577 3472 1.786 - - - - - 0.883 0.903 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
34. vim ENSDARG00000010008 3551 1.783 - - - - - 0.893 0.890 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
35. hmgb1b ENSDARG00000030479 10398 1.779 - - - - - 0.898 0.881 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
36. neflb ENSDARG00000012426 298 1.779 - - - - - 0.883 0.896 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
37. CABZ01115322.1 CABZ01115322.1 1283 1.779 - - - - - 0.885 0.894 - -
38. gfap ENSDARG00000025301 5584 1.774 - - - - - 0.880 0.894 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
39. pcdh1gc5 ENSDARG00000104826 10052 1.771 - - - - - 0.843 0.928 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
40. dnajc5aa ENSDARG00000042948 2885 1.765 - - - - - 0.851 0.914 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
41. tuba1c ENSDARG00000055216 8384 1.761 - - - - - 0.862 0.899 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
42. vgf ENSDARG00000105529 247 1.758 - - - - - 0.852 0.906 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
43. vsnl1b ENSDARG00000044053 1120 1.752 - - - - - 0.903 0.849 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
44. STMN3 ENSDARG00000038465 1009 1.751 - - - - - 0.881 0.870 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
45. slc1a3a ENSDARG00000104431 9888 1.749 - - - - - 0.830 0.919 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
46. elavl3 ENSDARG00000014420 8644 1.748 - - - - - 0.830 0.918 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
47. nell2b ENSDARG00000062797 854 1.747 - - - - - 0.876 0.871 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
48. prrt1 ENSDARG00000062208 368 1.747 - - - - - 0.840 0.907 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
49. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.747 - - - - - 0.839 0.908 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
50. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.746 - - - - - 0.890 0.856 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
51. kif1ab ENSDARG00000062024 794 1.744 - - - - - 0.808 0.936 - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
52. gap43 ENSDARG00000099744 4114 1.744 - - - - - 0.852 0.892 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
53. btg2 ENSDARG00000020298 6616 1.742 - - - - - 0.862 0.880 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
54. aldocb ENSDARG00000019702 2111 1.74 - - - - - 0.845 0.895 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
55. sall3b ENSDARG00000057586 982 1.739 - - - - - 0.861 0.878 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
56. ptprna ENSDARG00000058646 1327 1.739 - - - - - 0.842 0.897 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
57. mllt11 ENSDARG00000071026 2518 1.739 - - - - - 0.858 0.881 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
58. rap2ip rap2ip 681 1.738 - - - - - 0.842 0.896 - -
59. AGO1 ENSDARG00000092644 4521 1.738 - - - - - 0.867 0.871 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
60. her4.1 ENSDARG00000056732 1264 1.738 - - - - - 0.811 0.927 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
61. itm2ca ENSDARG00000043448 1265 1.735 - - - - - 0.837 0.898 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
62. relnl relnl 863 1.734 - - - - - 0.884 0.850 - -
63. fyna ENSDARG00000011370 1679 1.734 - - - - - 0.896 0.838 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
64. CU928222.1 ENSDARG00000097436 1662 1.731 - - - - - 0.811 0.920 - -
65. hmp19 2554 1.73 - - - - - 0.819 0.911 - - HMP19 protein
66. hoxa9b ENSDARG00000056819 3081 1.728 - - - - - 0.855 0.873 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
67. her4.3 ENSDARG00000070770 613 1.726 - - - - - 0.821 0.905 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
68. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.725 - - - - - 0.853 0.872 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
69. stx1b ENSDARG00000000503 2724 1.725 - - - - - 0.858 0.867 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
70. dpysl3 ENSDARG00000002587 4381 1.725 - - - - - 0.844 0.881 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
71. plp1a ENSDARG00000103732 3544 1.724 - - - - - 0.811 0.913 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
72. stxbp1a ENSDARG00000001994 5154 1.723 - - - - - 0.827 0.896 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
73. snap25a ENSDARG00000020609 4537 1.723 - - - - - 0.836 0.887 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
74. UBE2QL1 ENSDARG00000079276 3474 1.722 - - - - - 0.838 0.884 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
75. hmgb3a ENSDARG00000056725 15668 1.72 - - - - - 0.881 0.839 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
76. pdzrn4 ENSDARG00000045687 362 1.719 - - - - - 0.810 0.909 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
77. CDK5R1 CDK5R1 562 1.719 - - - - - 0.871 0.848 - -
78. SEMA7A ENSDARG00000078707 465 1.719 - - - - - 0.873 0.846 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
79. ckbb ENSDARG00000043257 3503 1.718 - - - - - 0.872 0.846 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
80. FP016176.1 FP016176.1 7030 1.718 - - - - - 0.857 0.861 - -
81. C8H1orf106 C8H1orf106 2690 1.718 - - - - - 0.827 0.891 - -
82. TNRC6C_2 TNRC6C_2 2444 1.716 - - - - - 0.816 0.900 - -
83. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.714 - - - - - 0.828 0.886 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
84. BX511121.1 ENSDARG00000029997 1774 1.714 - - - - - 0.816 0.898 - -
85. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.713 - - - - - 0.850 0.863 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
86. AKT3 AKT3 1729 1.713 - - - - - 0.837 0.876 - -
87. fbxo41 ENSDARG00000078908 95 1.712 - - - - - 0.800 0.912 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
88. rheb ENSDARG00000090213 1432 1.712 - - - - - 0.798 0.914 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
89. pcp4b 1080 1.712 - - - - - 0.823 0.889 - - Purkinje cell protein 4b
90. syt11a ENSDARG00000057913 1145 1.707 - - - - - 0.781 0.926 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
91. calm1a ENSDARG00000021811 4791 1.707 - - - - - 0.888 0.819 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
92. nhlh2 ENSDARG00000025495 1860 1.704 - - - - - 0.791 0.913 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
93. dync1i1 ENSDARG00000060948 554 1.703 - - - - - 0.827 0.876 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
94. AUTS2 AUTS2 504 1.701 - 0.951 - - - - 0.750 - -
95. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.701 - - - - - 0.815 0.886 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
96. rab3ab ENSDARG00000043835 1267 1.699 - - - - - 0.820 0.879 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
97. CABZ01111990.1 CABZ01111990.1 4374 1.699 - - - - - 0.825 0.874 - -
98. tmie ENSDARG00000069423 305 1.698 - - - - - 0.822 0.876 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
99. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.697 - - - - - 0.847 0.850 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
100. pax6a ENSDARG00000103379 3061 1.697 - - - - - 0.886 0.811 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]

There are 1314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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