Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for safb

Gene Name Gene ID Reads Annotation
safb ENSDARG00000020467 5608 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]










Genes with expression patterns similar to safb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. safb ENSDARG00000020467 5608 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
2. fmnl2b ENSDARG00000075041 1744 3.422 0.732 - 0.960 - 0.936 - - - 0.794 formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
3. fbl ENSDARG00000053912 5891 3.189 0.787 - 0.950 - - 0.702 - - 0.750 fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
4. sipa1l2 ENSDARG00000061640 4545 2.689 - - 0.966 - 0.960 - - - 0.763 signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
5. tmed4 ENSDARG00000024954 3476 2.67 - - - - - 0.903 0.929 0.838 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
6. ppm1g ENSDARG00000075559 6516 2.609 - - - - 0.932 - 0.939 - 0.738 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
7. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 2.594 0.702 - 0.951 - - - 0.941 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
8. ddx19 ENSDARG00000005699 4602 2.579 - - - - 0.861 - - 0.893 0.825 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
9. rpl7l1 ENSDARG00000042864 3256 2.564 - - 0.928 - - - - 0.865 0.771 ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
10. lsm7 ENSDARG00000058328 7191 2.563 - - 0.888 - - - 0.898 - 0.777 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
11. prkcda ENSDARG00000009208 1508 2.559 - - 0.930 - - 0.799 0.830 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
12. magt1 ENSDARG00000058062 3903 2.547 - 0.760 - - 0.945 0.842 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
13. rbm25 rbm25 3629 2.535 0.785 - 0.921 - - - - - 0.829
14. cand1 ENSDARG00000017841 8164 2.523 - 0.701 0.860 - 0.962 - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
15. psmd7 ENSDARG00000102417 4732 2.518 - - - - - 0.877 0.897 - 0.744 proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
16. luc7l ENSDARG00000055903 3357 2.516 0.817 - 0.925 - - - - - 0.774 LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
17. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 2.503 - - - - - 0.902 0.879 - 0.722 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
18. wtap ENSDARG00000042642 1779 2.496 - - - - - 0.810 0.923 - 0.763 WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
19. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 2.485 0.742 - - - - 0.830 0.913 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
20. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.475 - - - - 0.870 - - 0.809 0.796 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
21. mgaa ENSDARG00000078784 1344 2.463 - - 0.962 - - - - 0.793 0.708 MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
22. mxd3 ENSDARG00000098350 3040 2.422 - - - - - 0.858 - 0.762 0.802 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
23. pou3f3a ENSDARG00000042032 2835 2.401 - - 0.945 - 0.708 - - - 0.748 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
24. dvl2 ENSDARG00000056184 1525 2.388 - - - - - 0.820 - 0.757 0.811 dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
25. znf740 znf740 2458 2.387 - - - - - 0.876 - 0.780 0.731
26. FAM171A2 FAM171A2 707 2.357 - - - - - 0.912 - 0.732 0.713
27. txnrd1 11401 2.322 - - - - 0.865 0.755 - - 0.702 thioredoxin reductase 1
28. tmem30aa ENSDARG00000030236 2842 2.321 - - - - 0.822 0.758 - 0.741 - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
29. USMG5 USMG5 10356 2.293 - 0.717 0.712 - 0.864 - - - -
30. mcm2 ENSDARG00000102798 8148 2.274 - - 0.720 - - - - 0.728 0.826 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
31. lmnb2 ENSDARG00000101624 11304 2.27 - - - - - - 0.770 0.730 0.770 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
32. tmpob ENSDARG00000022978 8121 2.196 - - - 0.708 - 0.701 - - 0.787 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
33. srsf2a ENSDARG00000057484 25721 1.912 - - - - 0.948 - 0.964 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
34. scaf11 ENSDARG00000045885 3531 1.905 - - - - 0.957 - 0.948 - - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
35. cpsf1 ENSDARG00000034178 2036 1.904 - - 0.946 - - - 0.958 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
36. stm ENSDARG00000035694 1567 1.902 - - 0.940 - 0.962 - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
37. rybpb ENSDARG00000053459 1464 1.901 - - 0.950 - - - 0.951 - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
38. ftsjd2 ftsjd2 2694 1.9 - - 0.938 - 0.962 - - - -
39. zc3h18 ENSDARG00000062506 1676 1.895 - - 0.946 - - - 0.949 - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
40. psma3 ENSDARG00000086618 6200 1.892 - - - - 0.943 - 0.949 - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
41. srrm2 ENSDARG00000037965 1967 1.886 - - 0.934 - - - 0.952 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
42. clk2a ENSDARG00000062954 1890 1.876 - - 0.943 - - - 0.933 - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
43. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.857 - - 0.939 - - 0.918 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
44. gigfy2 3194 1.854 - - 0.920 - - - 0.934 - - GRB10 interacting GYF protein 2, transcript variant X1
45. CCDC106 CCDC106 1908 1.842 - - - - 0.956 - - 0.886 -
46. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.842 - - - - - 0.902 0.940 - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
47. ik ENSDARG00000004161 3132 1.838 - - - - - 0.873 0.965 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
48. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.825 - - 0.946 - - 0.879 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
49. ARHGAP23 ARHGAP23 3946 1.816 - - - - 0.951 - 0.865 - -
50. tfam ENSDARG00000063145 4524 1.811 - - - - - 0.847 0.964 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
51. hsbp1a ENSDARG00000069425 1086 1.811 - - 0.942 - - 0.869 - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
52. C6H2orf40 C6H2orf40 4224 1.809 - - 0.927 - - 0.882 - - -
53. acvr1b acvr1b 2963 1.808 - - - - 0.960 - - - 0.848
54. tmem50a ENSDARG00000015757 3244 1.801 - - 0.935 - - 0.866 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
55. emc6 ENSDARG00000035282 4981 1.799 - - - - - - 0.957 0.842 - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
56. TMEM184B TMEM184B 1280 1.798 - - - - - 0.854 0.944 - -
57. mrpl24 ENSDARG00000019222 798 1.798 - - - - - 0.863 0.935 - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
58. c1galt1c1 ENSDARG00000036335 1623 1.797 - - 0.939 - - 0.858 - - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
59. CACHD1 ENSDARG00000061590 1287 1.796 - - - - - 0.848 0.948 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
60. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.795 - - - - - - 0.966 - 0.829 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
61. dnajb9a ENSDARG00000052072 578 1.794 - - - - - 0.863 0.931 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
62. gbas gbas 735 1.792 - - - - - 0.851 0.941 - -
63. serbp1a ENSDARG00000074242 10818 1.79 - - - - 0.911 - 0.879 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
64. clstn1 ENSDARG00000031720 5286 1.787 - - 0.902 - 0.885 - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
65. EEF1E1 ENSDARG00000071774 3806 1.787 - - 0.943 - - 0.844 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
66. lppr3a lppr3a 1294 1.783 - - - - 0.960 - - - 0.823
67. e2f7 ENSDARG00000008986 1439 1.772 - - - - 0.959 - - 0.813 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
68. kmt2a ENSDARG00000004537 2169 1.771 - - - - - - 0.953 - 0.818 lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
69. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.77 - - 0.957 - - 0.813 - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
70. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.77 0.803 - - - - - 0.967 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
71. vta1 ENSDARG00000013732 6072 1.767 - - - - 0.967 0.800 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
72. CABZ01084815.1 CABZ01084815.1 351 1.767 - - - - - 0.847 0.920 - -
73. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.766 - - 0.944 - - - - 0.822 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
74. zgc:163030 ENSDARG00000069192 2963 1.765 - - - - - 0.847 0.918 - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
75. axin2 ENSDARG00000100149 4223 1.763 - - 0.955 - - - - 0.808 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
76. med19a ENSDARG00000037392, ENSDARG00000114246 2231 1.762 - - 0.970 - - 0.792 - - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
77. purba ENSDARG00000068822 2537 1.761 - - - - - 0.810 0.951 - - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
78. polr2d ENSDARG00000076509 3386 1.761 - - 0.940 - - - - - 0.821 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
79. pola2 ENSDARG00000015070 2286 1.76 - - 0.962 - - - - - 0.798 polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
80. nr1h3 ENSDARG00000098439 859 1.759 - - 0.944 - - - - 0.815 - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
81. kifc1 ENSDARG00000001558 6658 1.759 0.826 - - - 0.933 - - - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
82. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.758 - - 0.947 - - - - - 0.811 zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
83. NBEAL1 ENSDARG00000099547 1112 1.758 - - - - - 0.821 0.937 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
84. erh ENSDARG00000032866 20633 1.758 - - - - - 0.867 0.891 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
85. lamb4 ENSDARG00000039133 1220 1.755 - - - - - 0.843 0.912 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
86. ap2m1a ENSDARG00000002790 9781 1.755 - - - - 0.927 - 0.828 - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
87. zranb2 ENSDARG00000044332 6723 1.754 - - 0.958 - - - - - 0.796 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
88. cux1b ENSDARG00000043134 641 1.754 - - - - - 0.813 0.941 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
89. gnb1b_1 ENSDARG00000104372 3728 1.754 - 0.806 - - - - 0.948 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
90. tial1 ENSDARG00000009525 1856 1.753 - - 0.958 - - - - - 0.795 TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
91. hsf2 ENSDARG00000053097 1188 1.753 - - - - 0.957 - - 0.796 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
92. PTS ENSDARG00000045269 2185 1.748 - - - - - 0.799 0.949 - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
93. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.747 - - 0.969 - - - - - 0.778 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
94. Mar-07 Mar-07 2926 1.746 - - - - - - 0.946 0.800 -
95. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.739 - - 0.852 - - - - - 0.887 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
96. tmem2 2572 1.737 - - 0.948 - - - - 0.789 - transmembrane protein 2, transcript variant X1
97. acn9 acn9 520 1.732 - - - - - 0.793 0.939 - -
98. gpm6bb ENSDARG00000001676 2005 1.731 - - 0.917 - - - - - 0.814 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
99. glyr1 ENSDARG00000099213 6906 1.73 0.769 - - - - - 0.961 - - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
100. dnttip2 ENSDARG00000057648 2381 1.725 - - - - - - 0.952 0.773 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]

There are 2401 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA