Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sacs

Gene Name Gene ID Reads Annotation
sacs ENSDARG00000091042 314 sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]










Genes with expression patterns similar to sacs

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sacs ENSDARG00000091042 314 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
2. dtnbb ENSDARG00000013020 280 2.616 - - - 0.901 - 0.937 - 0.778 - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
3. fgf17 ENSDARG00000102778 136 1.83 - - - - - 0.885 - - 0.945 fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
4. LRFN2 118 1.803 - - - 0.901 - 0.902 - - - leucine rich repeat and fibronectin type III domain containing 2
5. BX323449.2 BX323449.2 50 1.792 - - - 0.915 - 0.877 - - -
6. si:ch211-213a13.1 ENSDARG00000090600 381 1.753 - - - 0.866 - 0.887 - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
7. st8sia5 ENSDARG00000036584 529 1.74 - - - 0.794 - 0.946 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
8. TMEM128 552 1.734 - - - - - 0.862 0.872 - - transmembrane protein 128
9. si:dkey-245p14.4 ENSDARG00000070320 418 1.726 - - - - - 0.935 0.791 - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
10. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.705 - - - - - 0.836 - 0.869 - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
11. alkbh2 ENSDARG00000059856, ENSDARG00000115064 97 1.704 - - - 0.892 - - 0.812 - - alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-060526-327]
12. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.692 - - - 0.839 - 0.853 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
13. slc22a2 ENSDARG00000030530 313 1.67 - - - 0.844 - 0.826 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
14. cplx4c ENSDARG00000094889 253 1.641 - - - 0.881 - 0.760 - - - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
15. pdlim5a ENSDARG00000101777 357 1.64 - - - - - 0.882 - 0.758 - PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
16. DBF4B ENSDARG00000086550 374 1.639 - - - - - 0.851 - 0.788 - DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
17. wars2 ENSDARG00000011801 134 1.639 0.758 - - - - 0.881 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
18. BDP1_1 BDP1_1 317 1.638 - - - - - 0.853 - - 0.785
19. stmn4 ENSDARG00000030106 518 1.637 - - - - - 0.912 0.725 - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
20. zhx2 zhx2 365 1.637 - - - 0.818 - 0.819 - - -
21. KCNIP4 ENSDARG00000088100 86 1.634 0.719 - - - - 0.915 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
22. KAT5 KAT5 623 1.633 - - - - - 0.921 - - 0.712
23. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.633 - - - 0.752 - 0.881 - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
24. skilb ENSDARG00000022904 300 1.63 - 0.820 - - - 0.810 - - - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
25. kcnn1b ENSDARG00000023546 152 1.628 - - - - - 0.772 - 0.856 - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
26. STRADB STRADB 403 1.628 - 0.846 - - - 0.782 - - -
27. ptprc ENSDARG00000071437 104 1.623 - - - - - - 0.747 - 0.876 protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
28. ift57 ENSDARG00000021022 288 1.621 - - - - - 0.810 - - 0.811 intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
29. fndc1 ENSDARG00000002847 178 1.619 - - - - - - - 0.788 0.831 fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
30. fam73b 76 1.614 0.719 - - - - - - - 0.895 family with sequence similarity 73, member B
31. pknox1.1_1 ENSDARG00000018765 203 1.611 - - - - - 0.900 0.711 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
32. elp4 ENSDARG00000008852 253 1.606 - - - - - - 0.749 - 0.857 elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
33. rad21b ENSDARG00000035655 87 1.6 0.712 - - - - 0.888 - - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
34. ddx31 ENSDARG00000035507 167 1.597 - 0.886 - - - - - 0.711 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
35. CNTNAP1 ENSDARG00000074524 73 1.595 0.719 - - - - 0.876 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
36. coasy ENSDARG00000042747 336 1.595 - 0.750 - - - - - - 0.845 CoA synthase [Source:ZFIN;Acc:ZDB-GENE-040912-137]
37. Metazoa_SRP_8 Metazoa_SRP_8 153 1.578 0.809 - - - - - - - 0.769
38. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 1.575 - - - - - - 0.768 - 0.807 forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
39. smim7 ENSDARG00000074848 1260 1.572 - - - 0.765 - - - - 0.807 small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
40. tubgcp2 ENSDARG00000013079 1520 1.568 - - - - - 0.819 0.749 - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
41. BAHD1 ENSDARG00000086789 1194 1.561 - - - 0.701 - - - - 0.860 bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
42. stmn4l ENSDARG00000043932 654 1.556 - - - 0.770 - 0.786 - - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
43. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.55 - - - 0.785 - 0.765 - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
44. CR407547.1 ENSDARG00000117572 41 1.548 0.707 - - - - 0.841 - - -
45. dlec1 ENSDARG00000075825 60 1.545 - - - - - - 0.711 0.834 - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
46. BX005272.1 BX005272.1 553 1.542 - 0.736 - - - - - 0.806 -
47. C25H11orf74 C25H11orf74 161 1.534 - - - 0.801 - - 0.733 - -
48. si:ch211-215p11.4 si:ch211-215p11.4 67 1.533 - - - - - 0.827 0.706 - -
49. ercc2 ENSDARG00000021985 678 1.53 - - - - - 0.828 - - 0.702 excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
50. cacng8b ENSDARG00000070626 176 1.525 0.752 - - - - 0.773 - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
51. mtx1a ENSDARG00000025500 275 1.525 - - - 0.816 - 0.709 - - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
52. alkbh3 ENSDARG00000045606, ENSDARG00000097208 169 1.521 - 0.706 - - - - 0.815 - - alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-040801-254]
53. CCDC61 ENSDARG00000062307 582 1.517 - 0.758 - - - 0.759 - - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
54. si:dkey-181m9.8 ENSDARG00000078267 123 1.515 - - - - - - 0.753 0.762 - si:dkey-181m9.8 [Source:ZFIN;Acc:ZDB-GENE-070912-399]
55. CU693494.3 CU693494.3 169 1.512 0.744 - - - - - - - 0.768
56. DBNDD2 DBNDD2 216 1.51 - - - 0.774 - - - - 0.736
57. zgc:55764 zgc:55764 645 1.496 - 0.721 - 0.775 - - - - -
58. adam28 ENSDARG00000035514, ENSDARG00000109685, ENSDARG00000111244 540 1.486 - - - 0.707 - - - - 0.779 ADAM metallopeptidase domain 28 [Source:ZFIN;Acc:ZDB-GENE-060929-532]
59. sgta ENSDARG00000019941 238 1.479 - - - - - 0.746 - - 0.733 small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
60. CABZ01088330.1 CABZ01088330.1 679 1.478 - 0.713 - - - 0.765 - - -
61. si:ch211-212k5.1 ENSDARG00000110637 337 1.469 - - - - - 0.739 0.730 - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
62. nat15 ENSDARG00000061185 396 1.443 - - 0.707 - - - - 0.736 - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
63. CR847906.1 ENSDARG00000099493 88 1.442 - - - - - 0.740 - - 0.702 protein NLRC3-like [Source:NCBI gene;Acc:571651]
64. vps39 ENSDARG00000074471 684 1.434 - - - - - 0.723 - - 0.711 vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
65. alad ENSDARG00000100372 1711 1.43 - 0.726 - - - 0.704 - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
66. si:ch211-86h15.1 ENSDARG00000074098 354 1.424 - 0.708 - - - - - 0.716 - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
67. rars ENSDARG00000054530 1495 1.419 - - - - - - 0.718 - 0.701 arginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9014]
68. si:dkeyp-75b4.10 ENSDARG00000079043 7 0.953 - - - - - - - - 0.953 si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
69. C18H15orf26 C18H15orf26 36 0.953 - - - - - - - - 0.953
70. si:ch211-79g12.2 si:ch211-79g12.2 7 0.953 - - - - - - - - 0.953
71. ASTL ASTL 24 0.953 - - - - - - - - 0.953
72. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.953 - - - - - - - - 0.953 si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
73. si:dkey-203a12.2 ENSDARG00000102271 7 0.953 - - - - - - - - 0.953 si:dkey-203a12.2 [Source:ZFIN;Acc:ZDB-GENE-091118-100]
74. NUGGC_3 NUGGC_3 10 0.953 - - - - - - - - 0.953
75. adarb1a ENSDARG00000041609 476 0.951 - - - - - 0.951 - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
76. ELMO2 ENSDARG00000063527 301 0.951 - - - - - 0.951 - - - engulfment and cell motility 2 [Source:ZFIN;Acc:ZDB-GENE-140106-84]
77. acp5b ENSDARG00000101456, ENSDARG00000109721, ENSDARG00000110522 48 0.948 - - - - - - - - 0.948 acid phosphatase 5b, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040718-151]
78. dpysl4 ENSDARG00000103490 534 0.948 - - - - - 0.948 - - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
79. si:ch73-68b22.2 ENSDARG00000094609 18 0.946 - - - - - - - - 0.946 si:ch73-68b22.2 [Source:ZFIN;Acc:ZDB-GENE-091204-355]
80. LINGO2 LINGO2 300 0.946 - - - - - 0.946 - - -
81. thsd7ba ENSDARG00000095022 231 0.946 - - - - - 0.946 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
82. atcaya ENSDARG00000071678 344 0.945 - - - - - 0.945 - - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
83. CT025910.1 CT025910.1 143 0.945 - - - - - 0.945 - - -
84. syt9a ENSDARG00000003994 298 0.945 - - - - - 0.945 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
85. nxph1 ENSDARG00000033447 182 0.945 - - - - - 0.945 - - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
86. BX088524.2 ENSDARG00000103268 564 0.944 - - - - - 0.944 - - -
87. lingo1a ENSDARG00000034165 179 0.943 - - - - - 0.943 - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
88. si:dkey-11f4.14 ENSDARG00000098461 35 0.942 - - - - - - - - 0.942 si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
89. si:dkey-10g2.5 si:dkey-10g2.5 72 0.942 - - - - - - - - 0.942
90. ponzr6 ENSDARG00000036382 16 0.942 - - - - - - - - 0.942 plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
91. CR388231.1 ENSDARG00000098710 153 0.941 - - - - - 0.941 - - -
92. nexmifb ENSDARG00000029296 416 0.941 - - - - - 0.941 - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
93. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 0.94 - - - - - 0.940 - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
94. C19H7orf41 C19H7orf41 2243 0.938 - - - - - 0.938 - - -
95. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 0.937 - - - - - 0.937 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
96. MFAP4_6 MFAP4_6 162 0.937 - - - - - - - - 0.937
97. palm1b ENSDARG00000007818 2128 0.936 - - - - - 0.936 - - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
98. zic3 ENSDARG00000071497 1448 0.936 - - - - - 0.936 - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
99. DACT3_1 DACT3_1 1235 0.935 - - - - - 0.935 - - -
100. dnajc6 ENSDARG00000079891 438 0.935 - - - - - 0.935 - - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]

There are 2056 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA