Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ryr3

Gene Name Gene ID Reads Annotation
ryr3 ENSDARG00000071331 6795 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]










Genes with expression patterns similar to ryr3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ryr3 ENSDARG00000071331 6795 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
2. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 6.476 0.797 0.934 0.733 0.751 0.761 0.934 - 0.716 0.850 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
3. trdn ENSDARG00000041779 4283 6.001 0.850 0.880 0.726 - - 0.870 0.976 0.844 0.855 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
4. prx ENSDARG00000017246 6183 5.753 0.848 0.864 0.810 0.710 - - 0.969 0.743 0.809 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
5. atp2a1 ENSDARG00000020574 291561 5.711 0.812 - 0.849 0.859 0.782 0.781 0.766 - 0.862 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
6. CR847973.1 ENSDARG00000115516 8754 5.68 0.727 0.855 0.823 0.733 - 0.787 0.932 - 0.823
7. tnnt3a ENSDARG00000030270 112506 5.671 0.836 - 0.839 - 0.728 0.817 0.783 0.755 0.913 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
8. mylz3 ENSDARG00000017441 303597 5.582 0.798 - 0.824 0.765 0.802 0.813 0.730 - 0.850 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
9. tnnt2d ENSDARG00000002988 7590 5.546 0.733 0.866 - 0.716 0.740 0.755 0.930 - 0.806 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
10. CR354540.2 ENSDARG00000117517 18452 5.05 0.824 - 0.752 0.793 - - 0.965 0.798 0.918
11. hhatla ENSDARG00000039051 6598 5.049 0.849 0.916 0.726 0.732 - - 0.930 - 0.896 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
12. jph1a ENSDARG00000058603 2852 5.042 - 0.869 0.760 0.704 - 0.913 0.963 - 0.833 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
13. ttnb ttnb 73721 4.978 - - 0.855 0.808 0.787 0.914 - 0.780 0.834
14. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 4.965 0.841 0.943 0.723 0.784 - - - 0.733 0.941 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
15. mybpc2b ENSDARG00000021265 9618 4.915 0.802 0.917 0.729 - 0.762 - 0.900 - 0.805 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
16. znf648 ENSDARG00000104823 1918 4.82 0.746 0.891 - - 0.781 0.826 0.762 - 0.814 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
17. myoz1b ENSDARG00000071445 13381 4.773 0.809 - 0.772 0.812 0.758 - - 0.734 0.888 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
18. ckma ENSDARG00000035327, ENSDARG00000114671 418792 4.71 0.777 - 0.811 0.764 0.737 0.800 - - 0.821 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
19. epyc ENSDARG00000056950 7783 4.694 - 0.842 - 0.804 0.708 0.794 0.768 - 0.778 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
20. MYOM2_1 MYOM2_1 4054 4.491 0.724 0.748 0.782 0.727 - 0.759 - - 0.751
21. BX294434.1 ENSDARG00000061272 6493 4.47 0.880 0.908 0.844 - - - 0.963 - 0.875 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
22. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 4.409 0.922 0.895 - - 0.712 0.941 0.939 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
23. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.303 0.874 0.948 - - - - 0.931 0.726 0.824 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
24. si:ch211-114n24.7 si:ch211-114n24.7 2544 4.298 0.869 0.923 0.854 0.770 - - 0.882 - -
25. sptb ENSDARG00000030490 7128 4.273 0.784 0.918 - - - 0.916 0.953 - 0.702 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
26. PTPLA PTPLA 4044 4.26 0.775 0.889 - - - 0.796 0.944 - 0.856
27. MYOT ENSDARG00000076312 1791 4.214 0.712 0.898 - - - 0.908 0.945 0.751 - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
28. mdh1b ENSDARG00000018008 3196 4.17 0.847 0.789 - - - 0.808 0.944 - 0.782 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
29. sh3bgr ENSDARG00000021633 3498 4.165 0.794 0.838 - - - 0.852 0.937 - 0.744 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
30. myod1 ENSDARG00000030110 6019 4.141 0.773 0.889 - - - 0.801 0.935 - 0.743 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
31. NRAP ENSDARG00000009341 3565 4.133 0.755 0.890 0.729 - - 0.842 0.917 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
32. cap2 ENSDARG00000104478 3266 4.131 0.799 0.827 - - - 0.781 0.903 - 0.821 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
33. pygma ENSDARG00000055518 15972 4.13 0.819 0.914 - - 0.735 - 0.910 - 0.752 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
34. EHBP1L1 EHBP1L1 2500 4.13 0.732 0.867 - 0.747 - 0.844 0.940 - -
35. neb ENSDARG00000032630, ENSDARG00000109273 19493 4.11 0.850 - 0.822 0.784 0.733 - - - 0.921 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
36. ttna ttna 101197 4.1 0.806 - 0.804 - 0.765 - - 0.815 0.910
37. BX530018.3 ENSDARG00000107022 614 4.066 0.851 0.815 - 0.756 - - 0.899 - 0.745
38. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 4.051 0.762 - - 0.725 0.752 0.865 0.947 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
39. si:ch211-226o13.2 84923 4.036 - - 0.843 0.809 - 0.752 - 0.725 0.907 si:ch211-226o13.2
40. tgm2a ENSDARG00000070157 4516 4.031 0.851 - 0.727 - - 0.785 0.911 - 0.757 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
41. si:ch211-255p10.3 ENSDARG00000096616 8336 4.027 - - 0.739 0.726 - 0.797 0.858 - 0.907 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
42. alpk2 ENSDARG00000079637 1483 4.026 0.813 0.808 - - - 0.823 0.880 - 0.702 alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
43. ptrfa ptrfa 4363 4.019 0.729 0.875 0.701 - - 0.885 - - 0.829
44. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.017 0.718 0.721 - - - 0.803 0.937 - 0.838 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
45. SYNPO2L SYNPO2L 6697 4.006 0.783 - 0.724 0.784 - 0.878 - - 0.837
46. myoz2a ENSDARG00000012311 1373 4 0.708 0.868 - - - 0.775 0.921 - 0.728 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
47. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.947 0.836 - 0.760 0.703 - - 0.922 0.726 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
48. tpma ENSDARG00000033683 752432 3.921 0.830 - 0.811 - 0.717 - 0.816 - 0.747 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
49. casq1b ENSDARG00000018105 2643 3.896 0.750 0.818 - - 0.702 - 0.905 - 0.721 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
50. sgcd ENSDARG00000098573 4980 3.888 0.788 - 0.728 - - - 0.944 0.704 0.724 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
51. bin1 bin1 3199 3.874 0.780 - 0.807 - - - 0.834 0.729 0.724
52. ckmb ENSDARG00000040565 505935 3.85 0.773 - 0.828 - 0.719 0.804 - - 0.726 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
53. tnni2a.4 ENSDARG00000029069 122344 3.832 0.843 - 0.741 - 0.750 - - 0.719 0.779 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
54. pkmb ENSDARG00000099860 25094 3.761 0.710 - 0.729 0.806 - - 0.784 - 0.732 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
55. txlnbb ENSDARG00000076241 6396 3.584 0.818 0.916 - - - 0.939 0.911 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
56. klhl40a ENSDARG00000039052 2537 3.555 0.859 0.877 - - - 0.886 0.933 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
57. fitm1 ENSDARG00000056464 1759 3.552 0.799 0.889 - - - 0.906 0.958 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
58. alpk3a ENSDARG00000078989 1992 3.545 0.846 0.898 - - - 0.905 0.896 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
59. znf106a ENSDARG00000016651 6049 3.515 0.847 0.896 - - - - 0.953 - 0.819 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
60. C13H10orf71 3489 3.515 0.792 0.945 - - - - 0.938 - 0.840 chromosome 13 C10orf71 homolog
61. limch1a ENSDARG00000074275 2981 3.499 0.802 0.862 - - - 0.905 0.930 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
62. cacng1 cacng1 3118 3.479 0.883 0.894 - - - 0.804 0.898 - -
63. nexn ENSDARG00000057317 10972 3.461 0.861 - - - - 0.893 0.946 - 0.761 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
64. smyd2b ENSDARG00000005629 8181 3.43 0.879 0.895 - - - 0.867 - - 0.789 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
65. CR392006.1 CR392006.1 1401 3.418 - 0.911 - - - 0.863 0.855 - 0.789
66. gypc ENSDARG00000041546 1487 3.409 0.832 0.899 - - - 0.789 0.889 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
67. TRIM63 TRIM63 1600 3.406 0.771 0.815 - - - 0.860 0.960 - -
68. ntmt1 ENSDARG00000022399 5779 3.395 0.831 0.953 - - - 0.725 0.886 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
69. chrna1 ENSDARG00000009021 2931 3.381 0.727 0.910 - - - 0.790 0.954 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
70. klhl41b ENSDARG00000006757 10762 3.378 0.802 - - - - 0.822 0.947 - 0.807 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
71. jph2 ENSDARG00000028625 6706 3.374 0.812 - - - - 0.710 0.957 - 0.895 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
72. srl ENSDARG00000104587 11126 3.366 0.786 0.916 0.720 - - - 0.944 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
73. xirp2a ENSDARG00000071113 7113 3.364 0.814 0.842 - - - 0.777 0.931 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
74. FHOD3_1 FHOD3_1 983 3.36 0.842 0.868 - - - 0.780 0.870 - -
75. ppapdc3 ppapdc3 4924 3.356 0.833 - - - - 0.853 0.962 - 0.708
76. rtn2a ENSDARG00000016088 12184 3.35 0.867 - 0.760 - 0.778 - 0.945 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
77. TENC1 TENC1 1729 3.348 0.814 0.813 - - - 0.825 0.896 - -
78. COL22A1 COL22A1 4473 3.344 0.814 0.844 0.753 - - - 0.933 - -
79. myom1a ENSDARG00000061249 10230 3.336 - - 0.714 - - 0.836 0.967 - 0.819 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
80. CR450814.3 CR450814.3 608 3.334 - 0.814 - - - 0.887 0.899 - 0.734
81. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.322 0.745 - 0.757 - - - 0.943 - 0.877 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
82. zgc:158296 ENSDARG00000070923 3935 3.319 - 0.805 0.715 - - 0.895 0.904 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
83. fbp2 ENSDARG00000012366 1042 3.316 - 0.778 - - - 0.844 0.902 - 0.792 fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
84. cfl2 ENSDARG00000014106 8051 3.315 0.764 0.938 0.763 - - - 0.850 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
85. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.315 0.821 0.804 - - - 0.880 0.810 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
86. SYNPO2 SYNPO2 7382 3.311 - - 0.772 - - 0.974 0.743 - 0.822
87. MYOM1 MYOM1 3870 3.305 0.810 0.757 - - - - 0.925 - 0.813
88. trim55a ENSDARG00000029596 2858 3.29 0.785 0.898 - - - 0.733 0.874 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
89. ablim2 ENSDARG00000055223 1934 3.284 0.714 - - - - 0.931 0.916 - 0.723 actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
90. cacna2d1a ENSDARG00000014804 1924 3.278 0.857 0.775 - - - - 0.903 - 0.743 calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
91. kcnma1a ENSDARG00000079840 2584 3.277 0.803 0.817 - - - 0.788 0.869 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
92. stac3 ENSDARG00000098883 1765 3.277 0.733 0.829 - - - 0.849 0.866 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
93. obsl1b ENSDARG00000077388 2511 3.276 0.786 0.851 - - - 0.748 0.891 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
94. AIMP1 ENSDARG00000060036 4136 3.275 0.753 0.881 - - - 0.855 - - 0.786 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
95. sar1ab ENSDARG00000033320 3984 3.269 0.887 - 0.732 0.703 - - 0.947 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
96. SPEG SPEG 4017 3.267 0.798 - - - - - 0.933 0.720 0.816
97. cmya5 ENSDARG00000061379 1423 3.259 0.741 0.857 - - - - 0.891 - 0.770 cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
98. CU633479.5 ENSDARG00000114818 1815 3.259 0.719 0.888 - - - 0.721 0.931 - -
99. MUSTN1 MUSTN1 1882 3.254 0.721 0.840 - - - 0.815 0.878 - -
100. mir133b_1 671 3.252 0.933 0.834 - - - 0.783 0.702 - - microRNA 133b

There are 1671 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA