Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ryr1b

Gene Name Gene ID Reads Annotation
ryr1b ENSDARG00000023797 5693 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]










Genes with expression patterns similar to ryr1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ryr1b ENSDARG00000023797 5693 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
2. jph1a ENSDARG00000058603 2852 4.862 - 0.919 0.725 - 0.706 - 0.967 0.731 0.814 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
3. klhl31 ENSDARG00000039066 13656 4.761 - - 0.831 0.722 0.770 - 0.824 0.770 0.844 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
4. mybphb ENSDARG00000003081 5208 4.576 0.949 0.961 - - 0.815 - 0.964 - 0.887 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
5. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 4.312 - - 0.880 - 0.780 - 0.972 0.779 0.901 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
6. PTPLA PTPLA 4044 4.293 - 0.916 0.766 - - - 0.939 0.853 0.819
7. MYOM1 MYOM1 3870 4.257 - 0.818 0.760 - - - 0.962 0.857 0.860
8. tnnt3a ENSDARG00000030270 112506 4.229 - - 0.858 - 0.800 - 0.797 0.860 0.914 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
9. chrnd ENSDARG00000019342 2728 4.226 - 0.931 0.728 - - 0.916 0.917 - 0.734 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
10. hhatla ENSDARG00000039051 6598 4.226 - 0.939 0.717 - 0.711 - 0.943 - 0.916 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
11. trdn ENSDARG00000041779 4283 4.222 - 0.912 0.840 - 0.711 - 0.960 - 0.799 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
12. CR354540.2 ENSDARG00000117517 18452 4.211 - - 0.794 - 0.802 - 0.958 0.827 0.830
13. C13H10orf71 3489 4.207 - 0.956 0.791 - - - 0.957 0.700 0.803 chromosome 13 C10orf71 homolog
14. zgc:158296 ENSDARG00000070923 3935 4.205 0.907 0.899 0.715 - - - 0.921 - 0.763 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
15. srl ENSDARG00000104587 11126 4.15 - 0.952 0.774 0.728 - - 0.976 0.720 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
16. mylz3 ENSDARG00000017441 303597 4.132 - - 0.860 - 0.795 - 0.755 0.872 0.850 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
17. pygma ENSDARG00000055518 15972 4.124 - 0.930 - - 0.755 - 0.940 0.713 0.786 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
18. prx ENSDARG00000017246 6183 4.121 - 0.817 0.809 - 0.740 - 0.965 - 0.790 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
19. mybpc2b ENSDARG00000021265 9618 4.116 - 0.898 0.718 - - - 0.919 0.743 0.838 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
20. pcmt ENSDARG00000015201 5132 4.1 - 0.821 - - - 0.941 0.874 0.706 0.758 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
21. sptb ENSDARG00000030490 7128 4.1 - 0.914 0.763 0.735 - - 0.972 - 0.716 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
22. BX324201.1 BX324201.1 3302 4.081 - - 0.709 - - 0.911 0.954 0.767 0.740
23. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.08 - 0.787 0.725 - - - 0.969 0.726 0.873 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
24. mdh1b ENSDARG00000018008 3196 4.023 - 0.739 0.780 - 0.728 - 0.958 - 0.818 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
25. atp2a1 ENSDARG00000020574 291561 4.021 - - 0.802 - 0.774 - 0.803 0.771 0.871 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
26. ttnb ttnb 73721 3.975 - - 0.866 0.702 0.795 - - 0.829 0.783
27. tpma ENSDARG00000033683 752432 3.973 - - 0.811 - 0.783 - 0.834 0.804 0.741 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
28. mylpfb ENSDARG00000002589 70167 3.96 - 0.878 0.762 - 0.745 - 0.700 0.875 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
29. ckmb ENSDARG00000040565 505935 3.948 - - 0.849 - 0.784 - 0.708 0.881 0.726 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
30. SYNPO2 SYNPO2 7382 3.905 - - 0.785 0.781 - - 0.748 0.770 0.821
31. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 3.865 0.892 0.768 0.702 - - - - 0.756 0.747 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
32. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.593 - 0.946 - - - - 0.966 0.835 0.846 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
33. DNAJA4 ENSDARG00000051762 5657 3.502 0.908 0.891 - - - - 0.965 0.738 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
34. casq1b ENSDARG00000018105 2643 3.501 - 0.802 - - - 0.942 0.945 - 0.812 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
35. myom1a ENSDARG00000061249 10230 3.49 - - 0.776 - - - 0.990 0.873 0.851 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
36. BX294434.1 ENSDARG00000061272 6493 3.487 - 0.884 - - - - 0.965 0.765 0.873 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
37. EHBP1L1 EHBP1L1 2500 3.477 - 0.885 0.792 - - - 0.959 0.841 -
38. MYOT ENSDARG00000076312 1791 3.474 - 0.915 0.758 0.848 - - 0.953 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
39. pygmb ENSDARG00000013317 5454 3.467 0.886 0.871 - - - - 0.951 - 0.759 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
40. znf106a ENSDARG00000016651 6049 3.452 - 0.926 - - - - 0.968 0.734 0.824 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
41. txlnbb ENSDARG00000076241 6396 3.418 - 0.957 0.788 - - - 0.908 - 0.765 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
42. tnnc1b ENSDARG00000037539 13945 3.41 - 0.955 0.768 - 0.766 - 0.921 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
43. rtn2a ENSDARG00000016088 12184 3.404 - - 0.880 - 0.705 - 0.971 0.848 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
44. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.398 - 0.924 0.762 0.805 - - 0.907 - -
45. TMPO TMPO 3264 3.397 - 0.930 0.780 - 0.717 - 0.970 - -
46. pbxip1a ENSDARG00000071015 4960 3.397 - 0.951 0.787 - - - 0.944 - 0.715 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
47. eno3 ENSDARG00000039007 11355 3.378 0.868 0.794 - - - - 0.868 - 0.848 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
48. cap2 ENSDARG00000104478 3266 3.377 - 0.792 - - - - 0.919 0.809 0.857 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
49. mef2ca ENSDARG00000029764 18547 3.376 0.748 0.854 0.810 - - 0.964 - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
50. cav3 ENSDARG00000024141 14906 3.373 0.774 - - 0.860 0.800 - 0.939 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
51. CR847973.1 ENSDARG00000115516 8754 3.368 - 0.847 - - - - 0.968 0.710 0.843
52. fitm1 ENSDARG00000056464 1759 3.36 - 0.895 0.828 - 0.705 - 0.932 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
53. SPEG SPEG 4017 3.342 - - 0.815 - 0.721 - 0.966 - 0.840
54. stac3 ENSDARG00000098883 1765 3.328 - 0.910 0.702 - - - 0.917 - 0.799 SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
55. CR392006.1 CR392006.1 1401 3.323 - 0.924 - 0.748 - - 0.903 - 0.748
56. ntmt1 ENSDARG00000022399 5779 3.317 - 0.958 - 0.734 0.737 - 0.888 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
57. ttna ttna 101197 3.295 - - 0.834 - 0.783 - - 0.804 0.874
58. smyd2b ENSDARG00000005629 8181 3.292 - 0.920 - 0.828 0.770 - - - 0.774 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
59. si:ch211-226o13.2 84923 3.292 - - 0.801 - 0.711 - - 0.848 0.932 si:ch211-226o13.2
60. znf648 ENSDARG00000104823 1918 3.275 - 0.876 - - - - 0.813 0.788 0.798 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
61. jph1b ENSDARG00000038826 7416 3.275 - 0.889 0.825 - - - 0.762 0.799 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
62. myl1 ENSDARG00000014196 98943 3.272 0.727 - 0.890 - 0.833 - - 0.822 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
63. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.271 - - 0.789 - 0.751 - - 0.855 0.876 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
64. BX530018.3 ENSDARG00000107022 614 3.262 - 0.842 - 0.722 - - 0.919 - 0.779
65. AIMP1 ENSDARG00000060036 4136 3.243 - 0.923 0.727 - 0.746 - - - 0.847 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
66. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.213 - - 0.838 0.746 0.746 - - - 0.883 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
67. alpk2 ENSDARG00000079637 1483 3.21 - 0.818 - - 0.702 - 0.921 - 0.769 alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
68. adss ENSDARG00000002071 5497 3.21 - - 0.829 - 0.713 - 0.964 - 0.704 adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
69. vcl vcl 6667 3.185 - 0.917 0.804 - 0.742 - - - 0.722
70. si:ch211-156j16.1 ENSDARG00000092035 7441 3.184 - - 0.719 - - - 0.943 0.725 0.797 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
71. obsl1b ENSDARG00000077388 2511 3.174 - 0.857 0.709 - - - 0.881 0.727 - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
72. apobec2a ENSDARG00000018881 4790 3.162 - 0.898 0.740 - - - - 0.812 0.712 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
73. eef2l2 ENSDARG00000035256 6815 3.161 - 0.851 0.806 0.717 - - 0.787 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
74. ache ENSDARG00000031796 1985 3.155 - 0.866 0.756 - - - 0.825 - 0.708 acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
75. tnni2a.4 ENSDARG00000029069 122344 3.152 - - 0.759 - 0.764 - - 0.859 0.770 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
76. SYNPO2L SYNPO2L 6697 3.13 - - 0.785 - 0.757 - - 0.704 0.884
77. acta1b ENSDARG00000055618 195597 3.122 - - 0.836 - 0.702 - 0.771 0.813 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
78. ptrfa ptrfa 4363 3.11 - 0.860 - - 0.701 - - 0.713 0.836
79. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 3.108 0.838 0.707 - - - - 0.827 - 0.736 UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
80. sucla2 ENSDARG00000005359 5992 3.092 - 0.865 0.712 0.717 - - - - 0.798 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
81. tmem161a ENSDARG00000012790 16094 3.065 - - 0.773 - 0.702 - 0.740 - 0.850 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
82. usp28 ENSDARG00000008880 1850 2.802 - 0.918 - - - 0.929 0.955 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
83. ryr3 ENSDARG00000071331 6795 2.777 - 0.950 - - - - 0.969 - 0.858 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
84. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.678 - 0.973 0.771 - - - 0.934 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
85. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.673 - 0.919 - - - - - 0.844 0.910 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
86. cfl2 ENSDARG00000014106 8051 2.669 - 0.965 0.836 - - - 0.868 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
87. jph2 ENSDARG00000028625 6706 2.633 - - - - - - 0.975 0.756 0.902 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
88. nmrk2 ENSDARG00000067848 10293 2.631 - 0.919 - - 0.748 - 0.964 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
89. sh3bgr ENSDARG00000021633 3498 2.627 - 0.908 - - - - 0.948 - 0.771 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
90. serpinf1 ENSDARG00000069048 2083 2.616 - 0.763 - - - 0.919 0.934 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
91. zgc:66479 ENSDARG00000008732 3347 2.616 0.909 0.884 - - - - 0.823 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
92. myod1 ENSDARG00000030110 6019 2.609 - 0.886 - - - - 0.961 - 0.762 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
93. rp42-pen rp42-pen 3395 2.602 - 0.937 0.748 - - - 0.917 - -
94. tgm2a ENSDARG00000070157 4516 2.58 - - 0.819 - - - 0.942 - 0.819 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
95. PHB2 PHB2 3755 2.571 - 0.947 - 0.820 - - 0.804 - -
96. IGFN1 IGFN1 5030 2.57 - 0.834 - - - - - 0.883 0.853
97. myoz1b ENSDARG00000071445 13381 2.567 - - 0.768 - - - - 0.893 0.906 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
98. tnnt2d ENSDARG00000002988 7590 2.566 - 0.812 - - - - 0.936 - 0.818 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
99. cacna2d1a ENSDARG00000014804 1924 2.564 - 0.872 - - - - 0.938 0.754 - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
100. klhl41b ENSDARG00000006757 10762 2.558 - - 0.761 - - - 0.964 - 0.833 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]

There are 1869 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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