Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rybpb

Gene Name Gene ID Reads Annotation
rybpb ENSDARG00000053459 1464 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]










Genes with expression patterns similar to rybpb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rybpb ENSDARG00000053459 1464 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
2. srrm2 ENSDARG00000037965 1967 2.852 - - 0.944 - - - 0.976 0.932 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
3. APBA3 APBA3 852 2.733 - - 0.973 - - - - 0.899 0.861
4. cpsf1 ENSDARG00000034178 2036 2.648 - - 0.957 0.710 - - 0.981 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
5. ACTL7B ACTL7B 1219 2.513 - - - 0.801 - - 0.941 - 0.771
6. snai1b ENSDARG00000046019 886 2.492 - 0.720 0.971 0.801 - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
7. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 2.329 - 0.719 - - - - - 0.874 0.736 ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
8. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 2.223 - - - - - 0.700 - 0.725 0.798 ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
9. BX649554.3 BX649554.3 949 2.205 - 0.703 - 0.799 - - - 0.703 -
10. clk2a ENSDARG00000062954 1890 1.969 - - 0.984 - - - 0.985 - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
11. zc3h18 ENSDARG00000062506 1676 1.956 - - 0.976 - - - 0.980 - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
12. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.948 - - 0.980 - - - 0.968 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
13. SLITRK6 ENSDARG00000098769 217 1.922 - - - 0.944 - - 0.978 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
14. gigfy2 3194 1.909 - - 0.961 - - - 0.948 - - GRB10 interacting GYF protein 2, transcript variant X1
15. safb ENSDARG00000020467 5608 1.901 - - 0.950 - - - 0.951 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
16. dact2 ENSDARG00000056986 1121 1.891 - - 0.973 - - - - 0.918 - dishevelled-binding antagonist of beta-catenin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9975]
17. cactin ENSDARG00000059866 553 1.873 - - 0.984 0.889 - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
18. si:dkey-66i24.9 ENSDARG00000096689 796 1.869 - - 0.977 0.892 - - - - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
19. si:ch73-108h4.3 si:ch73-108h4.3 193 1.865 - - - - - - 0.980 0.885 -
20. supt4h1 ENSDARG00000113969 1024 1.863 - - - - - - 0.957 - 0.906 SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
21. ddx27 ENSDARG00000091831 1471 1.86 - - 0.965 - - - - - 0.895 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
22. ubap2l ENSDARG00000063219 1147 1.86 - - - - - - 0.966 - 0.894 ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
23. dlx4b ENSDARG00000071560 446 1.856 - - - - - - 0.976 - 0.880 distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
24. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1.853 - - - 0.948 - - - 0.905 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
25. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.853 - - 0.977 - - - - - 0.876 sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
26. pard6b ENSDARG00000003865 990 1.851 - - 0.975 - - - - 0.876 - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
27. ndc80 ENSDARG00000071694 1162 1.85 - - 0.969 - - - - 0.881 - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
28. ankrd50l ENSDARG00000007077 1115 1.842 - - - 0.890 - - 0.952 - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
29. prkcda ENSDARG00000009208 1508 1.838 - - 0.973 - - - 0.865 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
30. xpnpep1 ENSDARG00000029011 1723 1.837 - - 0.964 - - - - - 0.873 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
31. mecr ENSDARG00000032326 314 1.834 - - - 0.936 - - - 0.898 - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
32. timm23 timm23 2712 1.832 - - - - - - 0.979 - 0.853
33. tmem59 ENSDARG00000019033 2692 1.831 - - - - - - 0.969 - 0.862 transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
34. etfdh ENSDARG00000038834 1811 1.828 - - - - - - 0.954 - 0.874 electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
35. zgc:161969 ENSDARG00000041359 898 1.827 - - - - - - 0.982 0.845 - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
36. dhx34 ENSDARG00000061168 349 1.824 - - 0.982 0.842 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
37. abcb7 ENSDARG00000062795 1404 1.817 - - - - - - 0.959 - 0.858 ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
38. mycb ENSDARG00000007241 3988 1.815 - - - - - - 0.949 - 0.866 MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
39. pld1a ENSDARG00000056228 765 1.808 - - - 0.842 - - 0.966 - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
40. ppie ENSDARG00000103234, ENSDARG00000111596 511 1.806 - - 0.982 0.824 - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
41. dpf2 ENSDARG00000012219 666 1.797 - - 0.980 - - - - 0.817 - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
42. calhm2 ENSDARG00000039482 138 1.794 - - - 0.935 - - - - 0.859 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
43. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.792 - - - - - 0.820 0.972 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
44. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.791 - - - - - - 0.978 0.813 - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
45. etfa ENSDARG00000101631 2946 1.79 - - - - - - 0.940 0.850 - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
46. GIGYF1_1 GIGYF1_1 1865 1.789 - - 0.967 - - 0.822 - - -
47. chst11 ENSDARG00000034375 2701 1.783 - - - - - - 0.967 - 0.816 carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
48. skilb ENSDARG00000022904 300 1.781 - - - 0.942 - - - 0.839 - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
49. si:dkey-82i20.5 ENSDARG00000116717 2965 1.779 - - - - - - 0.984 0.795 - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
50. spopla ENSDARG00000010563 775 1.779 - - 0.905 0.874 - - - - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
51. faf2 ENSDARG00000052374 1351 1.777 - 0.915 - - - - - - 0.862 Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
52. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.777 - - 0.959 - - - - - 0.818 myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
53. BX323045.3 BX323045.3 1044 1.772 - - 0.982 0.790 - - - - -
54. nol10 ENSDARG00000020077 984 1.77 - 0.792 0.978 - - - - - - nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
55. fbxo30a ENSDARG00000058561 867 1.769 - - - 0.781 - - 0.988 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
56. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.766 - - 0.973 - - - - - 0.793 suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
57. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 1.766 - - - 0.863 - - - 0.903 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
58. agk ENSDARG00000009837, ENSDARG00000113514 811 1.765 - - - 0.785 - - 0.980 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
59. celsr1a ENSDARG00000069185 1894 1.764 - - - - - - 0.922 0.842 - cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
60. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.761 0.790 - 0.971 - - - - - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
61. atrip ENSDARG00000063076 385 1.761 - - - 0.894 - - - - 0.867 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
62. chchd1 ENSDARG00000029100 2121 1.752 - - - 0.796 - - 0.956 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
63. rab27a ENSDARG00000103935 1173 1.752 - - - - - - 0.965 - 0.787 RAB27A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050913-46]
64. tfap4 ENSDARG00000103923 2203 1.749 - - 0.958 - - - - - 0.791 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
65. phf3 ENSDARG00000034768 1372 1.748 - - 0.975 0.773 - - - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
66. inppl1a ENSDARG00000104222 6256 1.746 - - 0.889 - - - 0.857 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
67. wu:fb12e11 wu:fb12e11 2332 1.742 - - 0.980 - - - - 0.762 -
68. kif2c ENSDARG00000076228 2281 1.733 - - - 0.754 - - 0.979 - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
69. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.722 - - 0.881 - - - - - 0.841 BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
70. uhrf1 ENSDARG00000103409 3282 1.718 - - - - - 0.741 0.977 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
71. taf3 ENSDARG00000045513 1819 1.715 - - - - - 0.814 - - 0.901 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
72. spry4 ENSDARG00000068732 2091 1.71 - - 0.899 - - - - - 0.811 sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
73. twf1a ENSDARG00000115712 3465 1.71 - - 0.966 - - - - 0.744 - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
74. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.708 - - 0.984 - - 0.724 - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
75. ITFG3 ITFG3 1803 1.705 - 0.832 - 0.873 - - - - -
76. ttc1 ENSDARG00000044567 1141 1.704 - - - - - - 0.975 0.729 - tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
77. FAR2 FAR2 1459 1.702 0.721 - - - - - 0.981 - -
78. efhd1 ENSDARG00000043446 703 1.7 - - - 0.809 - - - 0.891 - EF-hand domain family, member D1 [Source:ZFIN;Acc:ZDB-GENE-030131-7461]
79. cdc42 ENSDARG00000044573 11795 1.69 - - 0.813 - - - 0.877 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
80. sltm ENSDARG00000052728 6234 1.686 - - 0.963 - - - - 0.723 - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
81. dennd5b ENSDARG00000003789 1152 1.686 - - - 0.702 - - 0.984 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
82. glyr1 ENSDARG00000099213 6906 1.685 - - - 0.740 - - 0.945 - - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
83. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.684 - 0.747 0.937 - - - - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
84. EMP3 EMP3 523 1.682 - - - 0.782 - - - - 0.900
85. hnrnpr ENSDARG00000014569 3423 1.68 - 0.748 0.932 - - - - - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
86. si:ch211-226m16.2 ENSDARG00000036785 2163 1.68 - - 0.850 - - - - - 0.830 si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
87. cdkn2aipnl ENSDARG00000053395 5107 1.678 - - - - - - 0.952 - 0.726 CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
88. PRODH_1 PRODH_1 3400 1.676 - - - - - - 0.817 - 0.859
89. cstf2_1 ENSDARG00000090788 709 1.671 - - - 0.767 - - - - 0.904 cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
90. ctsf ENSDARG00000063095 4564 1.666 - 0.731 0.935 - - - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
91. htatsf1 ENSDARG00000056649 2018 1.661 - 0.705 0.956 - - - - - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
92. kri1 ENSDARG00000075380 1463 1.66 - 0.703 0.957 - - - - - - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
93. ccdc85ca ENSDARG00000005232 3218 1.659 - - 0.935 - - 0.724 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
94. pef1 ENSDARG00000023989 3013 1.658 - - - 0.886 - - - - 0.772 penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
95. lsm7 ENSDARG00000058328 7191 1.658 - - 0.812 - - - 0.846 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
96. acbd3 ENSDARG00000042623 2643 1.658 - - - - - - 0.889 0.769 - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
97. tmem57a 861 1.655 - - - 0.812 - - - - 0.843 transmembrane protein 57a
98. nrg1 ENSDARG00000104314 1081 1.652 - 0.782 - - - - - - 0.870 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
99. srp72 ENSDARG00000014139 5221 1.651 - - - - - - 0.872 - 0.779 signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
100. igf2bp3 ENSDARG00000010266 5789 1.642 - - - - - - 0.905 - 0.737 insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]

There are 1921 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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