Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rybpa

Gene Name Gene ID Reads Annotation
rybpa ENSDARG00000037773 904 RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]










Genes with expression patterns similar to rybpa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rybpa ENSDARG00000037773 904 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
2. ctnnd2b ENSDARG00000003779 964 3.343 - - - - 0.987 0.720 0.705 0.931 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
3. gpr98 gpr98 717 2.74 - 0.915 - 0.840 0.985 - - - -
4. dpysl3 ENSDARG00000002587 4381 2.434 - - - - 0.947 0.720 0.767 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
5. mier1a ENSDARG00000041072 1690 2.428 - - - 0.706 0.966 - - 0.756 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
6. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 2.42 - - - 0.885 - - - 0.834 0.701 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
7. usp49 ENSDARG00000000229 706 2.397 - 0.707 - 0.896 - - 0.794 - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
8. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.369 - - - 0.809 - - 0.712 0.848 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
9. SPTBN4_1 ENSDARG00000092624 473 2.347 - - - 0.905 - 0.729 - 0.713 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
10. mb21d2a mb21d2a 421 2.327 - - - 0.891 - 0.730 0.706 - -
11. syngr3a ENSDARG00000014871 405 2.319 - - - 0.894 - 0.716 0.709 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
12. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.154 - - - - - 0.715 0.717 - 0.722 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
13. cspg5a ENSDARG00000069981 1699 2.129 - - - - - 0.705 0.702 0.722 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
14. ttk ENSDARG00000041361 3911 2.128 - - - 0.718 - - 0.702 - 0.708 ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
15. cdan1 ENSDARG00000042261 658 1.879 - - - 0.887 0.992 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
16. dhx9 ENSDARG00000079725 1241 1.879 - - - 0.893 0.986 - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
17. tdg tdg 3269 1.848 - - - 0.891 0.957 - - - -
18. C1H3orf70 C1H3orf70 634 1.837 - 0.846 - - 0.991 - - - -
19. lrrfip2 ENSDARG00000010400 2633 1.831 - - - 0.841 0.990 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
20. mbd1 mbd1 1309 1.814 - - - - 0.988 0.826 - - -
21. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.811 - - - 0.840 0.971 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
22. brip1 ENSDARG00000074410, ENSDARG00000113993 501 1.81 - 0.875 - 0.935 - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
23. rassf10a 417 1.794 - 0.800 - - 0.994 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
24. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.748 0.852 - - 0.896 - - - - - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
25. anapc1 ENSDARG00000075687 488 1.746 - - - 0.751 0.995 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
26. zcchc17 ENSDARG00000018936 1577 1.743 - - - 0.779 0.964 - - - - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
27. pcdh18a ENSDARG00000089805 1096 1.734 - - - - 0.995 - 0.739 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
28. brd7 ENSDARG00000008380 3654 1.731 - - - - 0.986 - 0.745 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
29. her4.3 ENSDARG00000070770 613 1.728 - - - - 0.994 0.734 - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
30. KIF1A KIF1A 1686 1.726 - - - - 0.982 - 0.744 - -
31. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.723 - - - - 0.980 - 0.743 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
32. lrrc28 ENSDARG00000057477 444 1.72 - 0.815 - - 0.905 - - - - leucine rich repeat containing 28 [Source:ZFIN;Acc:ZDB-GENE-061128-1]
33. nck2b ENSDARG00000043361 908 1.71 - - - 0.892 - - 0.818 - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
34. gnao1a ENSDARG00000016676 8184 1.705 - - - - 0.986 - 0.719 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
35. smg7 ENSDARG00000060767 2759 1.702 - - - - 0.964 - - - 0.738 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
36. zgc:92664 ENSDARG00000015161 1651 1.7 - - - 0.724 0.976 - - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
37. si:dkey-19e4.5 ENSDARG00000089886 2562 1.699 - - - - 0.985 - - 0.714 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
38. hoxc4a ENSDARG00000070338 1382 1.698 - - - - 0.978 - 0.720 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
39. ppp1cb ENSDARG00000044153 4748 1.692 - - - - 0.948 - - 0.744 - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
40. utp3 ENSDARG00000056720 922 1.69 - - - - 0.989 - - 0.701 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
41. cdc14ab ENSDARG00000057016 1016 1.69 - - - 0.708 0.982 - - - - cell division cycle 14Ab [Source:ZFIN;Acc:ZDB-GENE-070705-309]
42. znf710a ENSDARG00000014680 582 1.688 - - - 0.910 - - - - 0.778 zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
43. arid1ab ENSDARG00000101891 1722 1.685 0.708 - - - 0.977 - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
44. lppr3a lppr3a 1294 1.684 - - - 0.853 - - 0.831 - -
45. ints1 ENSDARG00000100419 1958 1.674 - - - - 0.939 - - - 0.735 integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
46. dixdc1b ENSDARG00000056267 307 1.672 - 0.773 - 0.899 - - - - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
47. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.672 - - - - 0.971 0.701 - - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
48. kmt2bb ENSDARG00000060697 5230 1.665 - - - 0.831 0.834 - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
49. tmem229b ENSDARG00000060569 516 1.664 - 0.783 - 0.881 - - - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
50. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.663 - 0.734 - - - - - 0.929 - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
51. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.66 - - - 0.703 0.957 - - - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
52. scrt2 ENSDARG00000056175 4331 1.656 - - - - 0.945 - 0.711 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
53. gnb1b ENSDARG00000104372 1077 1.65 - 0.746 - - - - - 0.904 - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
54. CR548630.1 CR548630.1 3301 1.645 - - - 0.861 - 0.784 - - -
55. golga7 ENSDARG00000057676 4691 1.642 - - - 0.745 0.897 - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
56. plagx ENSDARG00000036855 3768 1.633 - - - 0.887 - - - 0.746 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
57. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.629 - - - 0.896 - - 0.733 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
58. ezh2 ENSDARG00000010571 3273 1.629 - - - - 0.928 - - 0.701 - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
59. si:ch211-199o1.2 ENSDARG00000056210 33 1.627 0.715 0.912 - - - - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
60. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.626 - - - 0.877 - - 0.749 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
61. actr1 ENSDARG00000011611 3879 1.62 - - - - - - 0.795 0.825 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
62. mxd3 ENSDARG00000098350 3040 1.619 - - - - - - - 0.835 0.784 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
63. cdc25 cdc25 3913 1.617 - - - - - 0.775 - 0.842 -
64. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.613 - - - - - - 0.853 - 0.760 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
65. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.611 - - - 0.792 - 0.819 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
66. rims2a ENSDARG00000101606 1088 1.609 - - - 0.897 - 0.712 - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
67. FOCAD ENSDARG00000022020 550 1.608 - - - 0.901 - 0.707 - - - focadhesin [Source:ZFIN;Acc:ZDB-GENE-080213-1]
68. negr1 ENSDARG00000021607 1051 1.603 - - - - - 0.728 - 0.875 - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
69. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.601 - - - 0.880 - - - 0.721 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
70. ercc3 ENSDARG00000002402 340 1.6 - - - 0.899 - - - - 0.701 excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
71. slc1a2b ENSDARG00000102453 3136 1.595 - - - - 0.892 - 0.703 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
72. pou2f1b ENSDARG00000007996 2172 1.593 - - - - - 0.817 0.776 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
73. bcl2_1 bcl2_1 1185 1.588 - - - 0.833 - - 0.755 - -
74. si:ch211-113e8.11 ENSDARG00000076585 721 1.585 0.742 - - 0.843 - - - - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
75. hif1an ENSDARG00000031915 2098 1.585 - - - 0.873 - - - 0.712 - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
76. arsg ENSDARG00000101715 57 1.584 0.709 0.875 - - - - - - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
77. sart3 ENSDARG00000008032 2594 1.58 - - - 0.875 - - 0.705 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
78. marcksa ENSDARG00000004049 2518 1.579 - - - 0.865 - - - - 0.714 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
79. fam118b ENSDARG00000078983 1822 1.573 0.753 - - - - - - 0.820 - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
80. gpm6bb ENSDARG00000001676 2005 1.572 - - - 0.870 - - - - 0.702 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
81. armc1l ENSDARG00000020887 1219 1.57 - 0.752 - 0.818 - - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
82. GLRA3 ENSDARG00000011066 242 1.567 - - - - - 0.859 0.708 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
83. FAM26E FAM26E 79 1.562 0.742 0.820 - - - - - - -
84. ttll7 ENSDARG00000062973 519 1.562 - - - - - - 0.828 0.734 - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
85. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.558 - - - 0.819 - 0.739 - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
86. mdkb ENSDARG00000020708 5393 1.555 - - - 0.836 - - 0.719 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
87. nova1 ENSDARG00000020178 4129 1.545 - - - - - - 0.721 0.824 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
88. ldb1a ENSDARG00000010137 3035 1.543 - - - 0.767 - - 0.776 - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
89. ZFHX3 ENSDARG00000103057 7759 1.543 - - - - 0.796 - 0.747 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
90. C8H1orf106 C8H1orf106 2690 1.538 - - - 0.805 - 0.733 - - -
91. zgc:55733 ENSDARG00000103845 1550 1.525 - - - - - - 0.792 0.733 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
92. TMEM185A TMEM185A 5505 1.523 0.704 - - 0.819 - - - - -
93. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.517 - - - - - 0.748 0.769 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
94. si:dkey-67c22.2 ENSDARG00000055389 6410 1.514 - - - - - - 0.813 0.701 - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
95. ZNF618 ENSDARG00000071469 2347 1.511 - - - 0.783 - - 0.728 - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
96. rhbdf1 rhbdf1 1608 1.509 - - - 0.761 - - - 0.748 -
97. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.504 - - - 0.781 - 0.723 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
98. fbxl14b ENSDARG00000045801 965 1.504 - - - - - - 0.718 - 0.786 F-box and leucine-rich repeat protein 14b [Source:ZFIN;Acc:ZDB-GENE-030131-3556]
99. nsd1a ENSDARG00000060016 2974 1.504 - - - 0.802 - - - 0.702 - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
100. igdcc3 ENSDARG00000075158 1921 1.5 - - - - - 0.790 - - 0.710 immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]

There are 1886 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA