Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rxrgb

Gene Name Gene ID Reads Annotation
rxrgb ENSDARG00000004697 332 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]










Genes with expression patterns similar to rxrgb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rxrgb ENSDARG00000004697 332 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
2. zgc:173480 171 2.783 - - - 0.938 - - - 0.851 0.994 zgc:173480
3. dopey1 438 2.658 0.785 - - 0.889 - - - - 0.984 dopey family member 1, transcript variant X4
4. spsb4a ENSDARG00000016084, ENSDARG00000116235 544 2.399 0.815 - - 0.762 0.822 - - - - splA/ryanodine receptor domain and SOCS box containing 4a [Source:ZFIN;Acc:ZDB-GENE-070911-3]
5. ccdc82 ENSDARG00000014966 563 1.861 - - - 0.903 - - - - 0.958 coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
6. yipf2 ENSDARG00000021399 702 1.853 - - - 0.885 - - - - 0.968 Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
7. CENPF ENSDARG00000055133 436 1.852 - - - 0.872 - - - - 0.980 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
8. ltc4s ENSDARG00000062598 138 1.826 - 0.835 - - - - - - 0.991 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
9. creg2 ENSDARG00000000666 643 1.82 - - - - - - - 0.857 0.963 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
10. CR361561.3 CR361561.3 91 1.799 0.878 - - 0.921 - - - - -
11. si:ch1073-174d20.2 ENSDARG00000079651 171 1.798 - - - 0.857 - - - 0.941 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
12. triap1 ENSDARG00000014963 646 1.796 - - - - - - - 0.819 0.977 TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
13. eml3 ENSDARG00000058038 449 1.792 - - - 0.820 - - - - 0.972 echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
14. atrip ENSDARG00000063076 385 1.775 - - - 0.829 - - - 0.946 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
15. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.764 - - - - - - - 0.858 0.906 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
16. eif4e3 ENSDARG00000005078 1624 1.762 - - - 0.881 - - - - 0.881 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
17. si:ch73-389b16.2 ENSDARG00000103802 340 1.743 0.873 - - 0.870 - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
18. IRS2 IRS2 485 1.743 - - - 0.900 - - - 0.843 -
19. mms19 ENSDARG00000079067 65 1.737 - 0.789 - 0.948 - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
20. CABZ01084569.1 CABZ01084569.1 650 1.723 - - - - - - - 0.776 0.947
21. kif18a ENSDARG00000008022 546 1.719 - - - - - - 0.779 - 0.940 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
22. pus7 ENSDARG00000031774 195 1.707 - 0.723 - - - - - - 0.984 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
23. als2b ENSDARG00000076924 738 1.706 - - - - - - - 0.763 0.943 amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
24. calcoco1 calcoco1 1060 1.705 - - - 0.831 - - - - 0.874
25. b3gat3 ENSDARG00000001939 58 1.692 0.744 - - 0.948 - - - - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
26. ovol1 1037 1.672 - - - 0.764 - - - 0.908 - ovo-like zinc finger 1, transcript variant X1
27. nlgn1 ENSDARG00000077710 72 1.669 - 0.730 - - - - - 0.939 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
28. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.664 - - - 0.811 - - - 0.853 - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
29. mob3c ENSDARG00000043705 306 1.661 - - - - - - 0.744 0.917 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
30. hdac4 ENSDARG00000098349 1370 1.649 - - - - - - - 0.786 0.863 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
31. psmg1 ENSDARG00000040620 1359 1.647 - - - - - - - 0.722 0.925 proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]
32. scaper ENSDARG00000023104 491 1.642 - 0.727 - - - - - 0.915 - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
33. slc17a9b ENSDARG00000011049 231 1.634 - - - 0.915 - - 0.719 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
34. pask ENSDARG00000075008 302 1.633 - - - - - - 0.819 0.814 - PAS domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-1394]
35. si:ch211-136a13.1 ENSDARG00000060927 250 1.632 0.745 - - 0.887 - - - - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
36. wdr26b ENSDARG00000006812 2216 1.632 - - - 0.806 - - - - 0.826 WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
37. fam49bb ENSDARG00000045417 513 1.626 - - - 0.920 - - - 0.706 - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
38. ANKLE1 ANKLE1 346 1.62 - 0.702 - - - - - 0.918 -
39. rhot1a ENSDARG00000099996 2059 1.616 - - - 0.760 - - - 0.856 - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
40. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.616 - - - 0.738 - - - - 0.878 deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
41. MSMP ENSDARG00000105581 254 1.611 0.771 - - 0.840 - - - - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
42. sco2 ENSDARG00000045555 219 1.611 0.735 0.876 - - - - - - - SCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]
43. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.608 - - - 0.869 - - - 0.739 - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
44. GPR17 ENSDARG00000062030 713 1.606 - - - 0.734 - - - - 0.872 G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
45. hax1 ENSDARG00000036764 617 1.604 - - - - - - 0.772 0.832 - HCLS1 associated protein X-1 [Source:ZFIN;Acc:ZDB-GENE-040718-26]
46. phactr2 ENSDARG00000027172 306 1.587 - - - - - 0.717 - 0.870 - phosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
47. wdr92 ENSDARG00000037334 329 1.565 - 0.715 - 0.850 - - - - - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
48. tom1 ENSDARG00000104581 1457 1.558 - - - 0.717 - - - - 0.841 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
49. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.545 - - - - 0.760 - - 0.785 - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
50. espl1 ENSDARG00000075354 818 1.545 - - - - - - - 0.737 0.808 extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
51. bag2 ENSDARG00000035005 1402 1.542 - - - - 0.792 - - - 0.750 BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
52. pcdh18a ENSDARG00000089805 1096 1.537 0.734 - - - - - - - 0.803 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
53. brd3a ENSDARG00000006527 1636 1.506 - 0.724 - - - - - - 0.782 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
54. ppp1r14c ENSDARG00000077341 1587 1.496 - - - 0.705 - - - - 0.791 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
55. FAM35A FAM35A 1091 1.463 - 0.713 - - - - 0.750 - -
56. creg1 ENSDARG00000105154 843 1.447 - - - 0.745 - - 0.702 - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
57. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1.428 0.720 0.708 - - - - - - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
58. ZNFX1 ENSDARG00000100280 118 0.995 - - - - - - - - 0.995 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
59. nupl2 ENSDARG00000029043 105 0.994 - - - - - - - - 0.994 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
60. CABZ01054405.1 CABZ01054405.1 115 0.994 - - - - - - - - 0.994
61. abcg1 ENSDARG00000063475 97 0.994 - - - - - - - - 0.994 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
62. dkk3b ENSDARG00000070683 209 0.994 - - - - - - - - 0.994 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
63. KLF8 ENSDARG00000060661 219 0.993 - - - - - - - - 0.993 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
64. flrt1a 107 0.993 - - - - - - - - 0.993 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
65. si:dkey-156k2.6 si:dkey-156k2.6 848 0.992 - - - - - - - - 0.992
66. rab11fip3 ENSDARG00000016490 661 0.992 - - - - - - - - 0.992 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
67. oraov1 497 0.992 - - - - - - - - 0.992 oral cancer overexpressed 1
68. ZFAT ENSDARG00000077987 205 0.992 - - - - - - - - 0.992 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
69. CTIF ENSDARG00000090617 270 0.992 - - - - - - - - 0.992 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
70. AKAP12 AKAP12 140 0.991 - - - - - - - - 0.991
71. slc6a6a ENSDARG00000012534 183 0.991 - - - - - - - - 0.991 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
72. SNAP91 ENSDARG00000098809 556 0.991 - - - - - - - - 0.991 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
73. ttc21b ENSDARG00000012368 229 0.991 - - - - - - - - 0.991 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
74. ube3d ENSDARG00000026178 244 0.99 - - - - - - - - 0.990 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
75. PRDM12 PRDM12 133 0.99 - - - - - - - - 0.990
76. slc25a43 ENSDARG00000102048 489 0.99 - - - - - - - - 0.990 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
77. RABEPK ENSDARG00000112165 112 0.989 - - - - - - - - 0.989 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
78. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.989 - - - - - - - - 0.989 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
79. ncam2 ENSDARG00000017466 175 0.989 - - - - - - - - 0.989 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
80. ror1 ENSDARG00000015176 378 0.989 - - - - - - - - 0.989 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
81. ptn ENSDARG00000102340 229 0.988 - - - - - - - - 0.988 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
82. nrxn3b ENSDARG00000062693 192 0.988 - - - - - - - - 0.988 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
83. prmt6 ENSDARG00000069706 484 0.988 - - - - - - - - 0.988 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
84. pif1 ENSDARG00000020289 216 0.988 - - - - - - - - 0.988 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
85. hprt1l ENSDARG00000014866 696 0.988 - - - - - - - - 0.988 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
86. CR678040.1 CR678040.1 117 0.987 - - - - - - - - 0.987
87. rnf121 ENSDARG00000060282 1809 0.987 - - - - - - - - 0.987 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
88. gpr143 ENSDARG00000034572 559 0.987 - - - - - - - - 0.987 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
89. AL929322.1 AL929322.1 300 0.987 - - - - - - - - 0.987
90. cenpk ENSDARG00000039616 744 0.986 - - - - - - - - 0.986 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
91. ptprk ENSDARG00000063416 742 0.986 - - - - - - - - 0.986 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
92. rcbtb1 ENSDARG00000036645 255 0.986 - - - - - - - - 0.986 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
93. sema4ab ENSDARG00000062352 409 0.986 - - - - - - - - 0.986 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
94. si:ch211-133l11.10 ENSDARG00000005626 381 0.986 - - - - - - - - 0.986 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
95. CR376785.2 CR376785.2 175 0.985 - - - - - - - - 0.985
96. nol8 ENSDARG00000044143 425 0.985 - - - - - - - - 0.985 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
97. nsun2 ENSDARG00000056665 740 0.985 - - - - - - - - 0.985 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
98. CEP152 ENSDARG00000075725 391 0.984 - - - - - - - - 0.984 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
99. pigl ENSDARG00000067752, ENSDARG00000116105 282 0.984 - - - - - - - - 0.984 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
100. RFFL_1 RFFL_1 157 0.984 - - - - - - - - 0.984

There are 1343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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