Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rxrga

Gene Name Gene ID Reads Annotation
rxrga ENSDARG00000005593 342 retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]










Genes with expression patterns similar to rxrga

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rxrga ENSDARG00000005593 342 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
2. si:ch211-212k5.2 si:ch211-212k5.2 152 2.329 0.799 0.814 - 0.716 - - - - -
3. adra1d ENSDARG00000024101 387 1.809 0.953 - - - - - - 0.856 - adrenoceptor alpha 1D [Source:ZFIN;Acc:ZDB-GENE-090312-203]
4. zbtb25 ENSDARG00000042383 94 1.767 1.000 0.767 - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
5. cart1 ENSDARG00000070930 46 1.767 1.000 0.767 - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
6. si:ch211-235f12.2 ENSDARG00000092119 31 1.765 0.956 0.809 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
7. CACNA1H CACNA1H 34 1.764 0.923 - - - - - - 0.841 -
8. hcrtr2 ENSDARG00000023722 70 1.762 0.930 - - - - - - 0.832 - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
9. zgc:165627 zgc:165627 4 1.751 1.000 - - - - - - - 0.751
10. lcn15 ENSDARG00000067851 140 1.741 1.000 - - - - - 0.741 - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
11. si:ch211-198k9.10 si:ch211-198k9.10 47 1.736 0.902 - - - - - - 0.834 -
12. ADCK2 ENSDARG00000073923 129 1.704 0.864 - - - - - - 0.840 - aarF domain containing kinase 2 [Source:ZFIN;Acc:ZDB-GENE-131121-369]
13. FP236810.2 ENSDARG00000113218 140 1.681 - - - - - - 0.835 0.846 - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
14. tnk2a ENSDARG00000090646 133 1.679 0.849 - - - - - - 0.830 - tyrosine kinase, non-receptor, 2a [Source:ZFIN;Acc:ZDB-GENE-091118-85]
15. ELFN1 ELFN1 59 1.667 0.815 - - - - - - 0.852 -
16. armc1 ENSDARG00000013861 175 1.663 - - - - - 0.788 0.875 - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
17. baz1a ENSDARG00000063233, ENSDARG00000099745 563 1.649 - - - - - 0.807 - 0.842 - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
18. ncf1 ENSDARG00000033735 83 1.639 - 0.809 - - - - - 0.830 - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
19. SPTBN1 ENSDARG00000102883 26 1.623 0.877 - 0.746 - - - - - - spectrin, beta, non-erythrocytic 1 [Source:ZFIN;Acc:ZDB-GENE-031006-3]
20. si:dkey-18j14.5 si:dkey-18j14.5 147 1.621 - - - - - - 0.739 0.882 -
21. zgc:101130 ENSDARG00000101926 924 1.609 0.841 - - - - - - 0.768 - zgc:101130 [Source:ZFIN;Acc:ZDB-GENE-040801-72]
22. fbxo32 ENSDARG00000040277 93 1.607 - 0.754 - - - - - 0.853 - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
23. zgc:194209 ENSDARG00000039356 317 1.598 - - - - - - 0.736 0.862 - zgc:194209 [Source:ZFIN;Acc:ZDB-GENE-081022-75]
24. myca ENSDARG00000045695 582 1.597 0.722 - - - - - - 0.875 - MYC proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990415-162]
25. bdnf ENSDARG00000018817 193 1.597 - - - 0.763 - - - 0.834 - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
26. snrnp48 ENSDARG00000039989, ENSDARG00000112516 237 1.592 0.794 - - - - - 0.798 - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-030131-4482]
27. trmt44 ENSDARG00000033957 133 1.584 - 0.764 - - - - 0.820 - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
28. rcan2 ENSDARG00000021869 874 1.571 - - - - - - 0.810 0.761 - regulator of calcineurin 2 [Source:ZFIN;Acc:ZDB-GENE-040516-17]
29. trim24 ENSDARG00000103350 431 1.56 - - - - - 0.757 0.803 - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
30. BX649554.3_1 BX649554.3_1 1071 1.557 - 0.855 - - - 0.702 - - -
31. SNORD27 SNORD27 181 1.553 - - - 0.779 - - - 0.774 -
32. grm7p grm7p 225 1.551 - 0.826 - - - - 0.725 - -
33. zgc:173617 zgc:173617 114 1.546 - - - - - 0.712 - 0.834 -
34. naglu ENSDARG00000030156 378 1.544 - - - 0.761 - - - 0.783 - N-acetylglucosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-100726-2]
35. phox2a ENSDARG00000007406 470 1.54 - - 0.773 - - - - - 0.767 paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
36. CR457441.2 CR457441.2 82 1.536 - 0.738 - - - - 0.798 - -
37. ociad2 ENSDARG00000052336 102 1.527 - 0.809 - - - - - - 0.718 OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
38. ca4c ENSDARG00000044512 102 1.527 - - - - - 0.702 0.825 - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
39. si:dkey-22i16.9 ENSDARG00000095949 16 1.525 0.716 0.809 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
40. rhag ENSDARG00000019253 2974 1.524 0.754 - - - - - 0.770 - - Rh associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8229]
41. rdh12l ENSDARG00000045277 139 1.524 - - - 0.745 - - 0.779 - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
42. NIPAL4 ENSDARG00000059365 597 1.516 - - - - - - - 0.774 0.742 NIPA like domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-412]
43. sim1a ENSDARG00000023316 190 1.507 - 0.726 - - - - - 0.781 - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
44. dkk2 ENSDARG00000076420 553 1.497 - 0.745 - - - - - 0.752 - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
45. si:dkey-151m22.8 ENSDARG00000095934 41 1.493 - 0.738 - 0.755 - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
46. TRIM14_1 TRIM14_1 228 1.48 - - - - - 0.738 - 0.742 -
47. nfkbil1 ENSDARG00000003157 78 1.473 - 0.724 - - - - 0.749 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040116-7]
48. si:dkey-88j15.5 si:dkey-88j15.5 48 1.472 0.765 0.707 - - - - - - -
49. rasgrp4 ENSDARG00000061796 134 1.462 - - - - - - 0.747 0.715 - RAS guanyl releasing protein 4 [Source:ZFIN;Acc:ZDB-GENE-050419-110]
50. USP2 USP2 157 1.461 - - - - - 0.745 0.716 - -
51. naa30 ENSDARG00000079686 814 1.454 - 0.748 - 0.706 - - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
52. nfatc1 ENSDARG00000036168 16 1.452 - 0.711 - - - - - - 0.741 nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
53. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 1.446 0.708 0.738 - - - - - - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
54. abhd17b ENSDARG00000035571 745 1.429 - - - 0.722 - 0.707 - - - abhydrolase domain containing 17B [Source:ZFIN;Acc:ZDB-GENE-040718-244]
55. SMCHD1 ENSDARG00000104374 2 1 1.000 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
56. ME1 ENSDARG00000053215 8 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
57. dnm3 dnm3 45 1 1.000 - - - - - - - -
58. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
59. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
60. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
61. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
62. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
63. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
64. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 1.000 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
65. fermt3b ENSDARG00000030938 17 1 1.000 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
66. cdkn1bb_1 ENSDARG00000054271 5 1 1.000 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
67. mpx ENSDARG00000019521 562 1 1.000 - - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
68. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
69. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
70. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
71. si:ch211-155o21.4 ENSDARG00000096567 25 1 1.000 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
72. fgf10b ENSDARG00000100475 17 1 1.000 - - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
73. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
74. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
75. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
76. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
77. sema6e ENSDARG00000000189 35 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
78. pias4b ENSDARG00000042215 12 1 1.000 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
79. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
80. HBQ1 HBQ1 413 1 1.000 - - - - - - - -
81. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
82. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
83. znf142 ENSDARG00000061373 47 1 1.000 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
84. si:dkey-56m15.8 ENSDARG00000098426 2 1 1.000 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
85. si:dkey-284p5.3 ENSDARG00000095638 4 1 1.000 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
86. MUC5AC_1 MUC5AC_1 381 1 1.000 - - - - - - - -
87. FP085392.1 FP085392.1 12 1 1.000 - - - - - - - -
88. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
89. APEX2 ENSDARG00000008472 7 1 1.000 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
90. cdk4 ENSDARG00000087937 80 1 1.000 - - - - - - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
91. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
92. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
93. si:dkey-241l7.5 ENSDARG00000088989 6 1 1.000 - - - - - - - - si:dkey-241l7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-237]
94. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
95. CABZ01048021.1 CABZ01048021.1 15 1 1.000 - - - - - - - -
96. si:ch211-223f7.1 si:ch211-223f7.1 38 1 1.000 - - - - - - - -
97. si:dkey-253d23.1 si:dkey-253d23.1 2 1 1.000 - - - - - - - -
98. TOR4A TOR4A 70 1 1.000 - - - - - - - -
99. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
100. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]

There are 1343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA