Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rxrbb

Gene Name Gene ID Reads Annotation
rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]










Genes with expression patterns similar to rxrbb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
2. si:dkey-17e16.17 615 1.9 - - - - - 0.996 0.904 - - si:dkey-17e16.17
3. CZv9_NA991H1orf52 CZv9_NA991H1orf52 1723 1.891 - 0.892 - - - 0.999 - - -
4. psmb7 ENSDARG00000037962 11542 1.8 - 0.810 - - - 0.990 - - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
5. mea1 ENSDARG00000039820 589 1.775 - - - - - 0.999 0.776 - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
6. cdk13 ENSDARG00000076791 828 1.732 - - - - - 0.999 0.733 - - cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
7. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.707 - 0.819 - - - - 0.888 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
8. FRMD4A ENSDARG00000042249 2883 1.672 - 0.843 - - - - 0.829 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
9. bcl2l10 ENSDARG00000026766 1426 1.664 - - - - - - 0.909 0.755 - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
10. vps28 ENSDARG00000103203 4991 1.648 - 0.701 - - - 0.947 - - - vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]
11. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.643 - - - - - - 0.778 0.865 - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
12. BX322601.2 BX322601.2 297 1.622 - - - 0.804 - - 0.818 - -
13. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.618 - 0.751 - - - - 0.867 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
14. casc3 ENSDARG00000029911 1174 1.593 - 0.765 - - - - 0.828 - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
15. LIMD2 ENSDARG00000078092 3414 1.59 - 0.860 - - - - 0.730 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
16. HOMEZ HOMEZ 1824 1.574 - - - - - - 0.800 0.774 -
17. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.573 - 0.800 - - - - 0.773 - - serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
18. ptges3b ENSDARG00000089626 5666 1.567 - - - - - 0.808 0.759 - - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
19. HDAC5 ENSDARG00000075139 1287 1.558 - - - - - - 0.845 - 0.713 histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
20. nasp ENSDARG00000039208, ENSDARG00000114134 873 1.554 - - - 0.747 - - 0.807 - - nuclear autoantigenic sperm protein (histone-binding) [Source:ZFIN;Acc:ZDB-GENE-030131-5511]
21. si:dkeyp-53d3.5 ENSDARG00000101542 171 1.539 - - - - - - 0.836 - 0.703 si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
22. bnipl ENSDARG00000060435 1382 1.532 - - - 0.737 - - 0.795 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
23. clic1 ENSDARG00000103340 2235 1.522 - 0.740 - - - - 0.782 - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
24. rbb4l ENSDARG00000015208 5542 1.514 - 0.731 - - - - 0.783 - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
25. psmg3 ENSDARG00000098391 920 1.51 - - - 0.744 - - 0.766 - - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
26. txlna ENSDARG00000077037 2614 1.509 - 0.777 - - - - 0.732 - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
27. CLDN23 CLDN23 2002 1.509 - - - 0.793 - - 0.716 - -
28. pnkd ENSDARG00000071032 447 1.502 - - - - - - 0.770 0.732 - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
29. map3k7 ENSDARG00000020469 2845 1.499 - 0.766 - - - - 0.733 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
30. pitpnaa ENSDARG00000039490 1096 1.493 - 0.719 - - - - 0.774 - - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
31. sarnp ENSDARG00000059357 4768 1.49 - 0.707 - - - - 0.783 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
32. fkbp10b ENSDARG00000045129 3525 1.468 - 0.732 - - - - 0.736 - - FK506 binding protein 10b [Source:ZFIN;Acc:ZDB-GENE-030131-3101]
33. psat1 ENSDARG00000016733 8084 1.467 - 0.731 - - - - 0.736 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
34. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.46 - 0.726 - - - - 0.734 - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
35. NTAN1 ENSDARG00000105182 844 1.429 - 0.721 - 0.708 - - - - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
36. HIST1H4J_1 HIST1H4J_1 4066 1.414 - 0.713 - - - - 0.701 - -
37. cpz ENSDARG00000075521 2356 0.999 - - - - - 0.999 - - - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
38. CU929219.1 CU929219.1 383 0.999 - - - - - 0.999 - - -
39. usp36 ENSDARG00000032327 1884 0.999 - - - - - 0.999 - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
40. efemp2a ENSDARG00000094324 39261 0.999 - - - - - 0.999 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
41. sptlc2b ENSDARG00000074287 1853 0.999 - - - - - 0.999 - - - serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
42. ube2z ENSDARG00000029215 1059 0.999 - - - - - 0.999 - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
43. fam84b ENSDARG00000032859, ENSDARG00000116831 386 0.999 - - - - - 0.999 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
44. evla ENSDARG00000035650 854 0.999 - - - - - 0.999 - - - Enah/Vasp-like a [Source:ZFIN;Acc:ZDB-GENE-000607-65]
45. socs3a ENSDARG00000025428 349 0.999 - - - - - 0.999 - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
46. si:ch211-138k19.2 si:ch211-138k19.2 398 0.999 - - - - - 0.999 - - -
47. ankrd13a ENSDARG00000061901 1192 0.999 - - - - - 0.999 - - - ankyrin repeat domain 13A [Source:ZFIN;Acc:ZDB-GENE-030131-1833]
48. cab39 ENSDARG00000043451 1326 0.999 - - - - - 0.999 - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
49. pax5 ENSDARG00000037383 319 0.999 - - - - - 0.999 - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
50. gbx1 ENSDARG00000071418 871 0.999 - - - - - 0.999 - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
51. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.999 - - - - - 0.999 - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
52. txndc11 ENSDARG00000101291 589 0.999 - - - - - 0.999 - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
53. tmem183a ENSDARG00000044899 491 0.999 - - - - - 0.999 - - - transmembrane protein 183A [Source:ZFIN;Acc:ZDB-GENE-050327-5]
54. si:dkeyp-73a2.2 ENSDARG00000079785 313 0.999 - - - - - 0.999 - - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
55. her9 ENSDARG00000056438, ENSDARG00000115775 3099 0.999 - - - - - 0.999 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
56. cbsa ENSDARG00000053500, ENSDARG00000112676 792 0.999 - - - - - 0.999 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
57. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.999 - - - - - 0.999 - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
58. b4galt1 ENSDARG00000002634 1076 0.999 - - - - - 0.999 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
59. ppp2r5eb ENSDARG00000069118 1902 0.998 - - - - - 0.998 - - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
60. PPAP2A PPAP2A 2409 0.998 - - - - - 0.998 - - -
61. acaa1 ENSDARG00000004687 557 0.998 - - - - - 0.998 - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
62. trappc5 ENSDARG00000026068 1350 0.998 - - - - - 0.998 - - - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
63. PLCL2 ENSDARG00000098826 596 0.998 - - - - - 0.998 - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
64. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.998 - - - - - 0.998 - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
65. grip1 ENSDARG00000015053 1275 0.998 - - - - - 0.998 - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
66. vamp5 ENSDARG00000068262 2413 0.998 - - - - - 0.998 - - - vesicle-associated membrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4209]
67. csrp1a ENSDARG00000006603 5188 0.998 - - - - - 0.998 - - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
68. l2hgdh ENSDARG00000060500 713 0.998 - - - - - 0.998 - - - L-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-090319-6]
69. zgc:112148 ENSDARG00000001804 386 0.998 - - - - - 0.998 - - - zgc:112148 [Source:ZFIN;Acc:ZDB-GENE-050417-235]
70. PIK3CA_1 PIK3CA_1 4065 0.998 - - - - - 0.998 - - -
71. MRPL52 ENSDARG00000090568 4402 0.998 - - - - - 0.998 - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
72. GIGYF1 1830 0.998 - - - - - 0.998 - - - GRB10 interacting GYF protein 1, transcript variant X6
73. dctn3 ENSDARG00000041363 3351 0.997 - - - - - 0.997 - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
74. pafah1b1a ENSDARG00000032013 3183 0.997 - - - - - 0.997 - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
75. plekhh1 ENSDARG00000053835 2123 0.997 - - - - - 0.997 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
76. insra ENSDARG00000011948 1258 0.997 - - - - - 0.997 - - - insulin receptor a [Source:ZFIN;Acc:ZDB-GENE-020503-3]
77. fbxw5 ENSDARG00000099139 2802 0.997 - - - - - 0.997 - - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
78. gdpd3a ENSDARG00000074466 1739 0.997 - - - - - 0.997 - - - glycerophosphodiester phosphodiesterase domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2279]
79. acvr1b acvr1b 2963 0.997 - - - - - 0.997 - - -
80. ddx6 ENSDARG00000061338 2514 0.997 - - - - - 0.997 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
81. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 0.997 - - - - - 0.997 - - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
82. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.997 - - - - - 0.997 - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
83. HOMER2 ENSDARG00000059349 2264 0.996 - - - - - 0.996 - - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
84. PCBP4 ENSDARG00000024276 3194 0.996 - - - - - 0.996 - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
85. slc25a12 ENSDARG00000102362 2773 0.996 - - - - - 0.996 - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
86. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 0.996 - - - - - 0.996 - - - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
87. rorca ENSDARG00000057231, ENSDARG00000111082 894 0.996 - - - - - 0.996 - - - RAR-related orphan receptor C a [Source:ZFIN;Acc:ZDB-GENE-990415-250]
88. ccnd2a ENSDARG00000051748 2506 0.996 - - - - - 0.996 - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
89. msrb1b ENSDARG00000045160, ENSDARG00000062442, ENSDARG00000115408 1682 0.996 - - - - - 0.996 - - - methionine sulfoxide reductase B1b [Source:ZFIN;Acc:ZDB-GENE-040912-88]
90. zgc:195001 ENSDARG00000070484 3281 0.996 - - - - - 0.996 - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
91. CDS1 ENSDARG00000019549 1659 0.996 - - - - - 0.996 - - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]
92. slc2a3a ENSDARG00000013295 2449 0.996 - - - - - 0.996 - - - solute carrier family 2 (facilitated glucose transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-040718-390]
93. clvs2 ENSDARG00000053122 1390 0.995 - - - - - 0.995 - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
94. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.995 - - - - - 0.995 - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
95. gmds ENSDARG00000026629 3976 0.995 - - - - - 0.995 - - - GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
96. farsa ENSDARG00000098825 2813 0.995 - - - - - 0.995 - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
97. CCDC86 CCDC86 2023 0.995 - - - - - 0.995 - - -
98. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.995 - - - - - 0.995 - - -
99. BX897684.1 BX897684.1 636 0.995 - - - - - 0.995 - - -
100. ctnnd1 ENSDARG00000078233 2520 0.994 - - - - - 0.994 - - - catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]

There are 1162 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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