Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rxrba

Gene Name Gene ID Reads Annotation
rxrba ENSDARG00000078954 85 retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]










Genes with expression patterns similar to rxrba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rxrba ENSDARG00000078954 85 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
2. DIP2C DIP2C 222 1.842 - - - 0.987 - - - 0.855 -
3. gdf6a ENSDARG00000053479 121 1.84 - 0.925 - - - - - 0.915 - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
4. NHSL1 NHSL1 182 1.829 - - - 0.982 - 0.847 - - -
5. CU929415.1 CU929415.1 10 1.829 - 0.829 - - - - 1.000 - -
6. zmym4 ENSDARG00000035823 347 1.81 - 0.875 - 0.935 - - - - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
7. si:dkey-157e10.7 si:dkey-157e10.7 105 1.793 - 1.000 - - - - 0.793 - -
8. aanat2 ENSDARG00000079802 175 1.789 - - - 0.996 - - 0.793 - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
9. rs1 rs1 70 1.785 - - - 0.992 - - 0.793 - -
10. lmo1 ENSDARG00000034504 260 1.733 - 0.765 - 0.968 - - - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
11. si:dkey-240e12.6 ENSDARG00000110137 674 1.729 - - - 0.844 - - - 0.885 - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
12. tmem229b ENSDARG00000060569 516 1.728 - - - 0.950 - 0.778 - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
13. TP53BP2 TP53BP2 217 1.721 - - - 0.997 - 0.724 - - -
14. si:ch211-10a23.2 ENSDARG00000060656 471 1.72 - - - 0.920 - 0.800 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
15. gpr98 gpr98 717 1.718 - - - 0.835 - 0.883 - - -
16. bora ENSDARG00000042688, ENSDARG00000112916 402 1.715 - 0.827 - 0.888 - - - - - bora, aurora kinase A activator [Source:ZFIN;Acc:ZDB-GENE-041114-165]
17. mb21d2a mb21d2a 421 1.711 - - - 0.951 - 0.760 - - -
18. galnt14 ENSDARG00000023448 102 1.704 - 0.714 - 0.990 - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
19. PPP2R2A PPP2R2A 50 1.703 - 0.906 - - - 0.797 - - -
20. nck2b ENSDARG00000043361 908 1.689 - - - 0.970 - 0.719 - - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
21. zdhhc6 ENSDARG00000075721 1494 1.686 - - - 0.954 - - - 0.732 - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
22. SPTBN4_1 ENSDARG00000092624 473 1.681 - 0.711 - 0.970 - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
23. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1.671 0.740 - - - - - - 0.931 - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
24. ARHGEF12 ARHGEF12 392 1.671 0.744 - - 0.927 - - - - -
25. ndufa4l2 153 1.651 - - - - - 0.760 0.891 - - NDUFA4, mitochondrial complex associated like 2
26. zgc:110699 ENSDARG00000017474 381 1.643 - 0.824 - - - 0.819 - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
27. si:dkey-102m7.3 ENSDARG00000100366 27 1.636 0.730 0.906 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
28. tmem136a ENSDARG00000024920 535 1.636 - - - 0.818 - 0.818 - - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
29. grip1 ENSDARG00000015053 1275 1.62 - - - 0.748 - - - 0.872 - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
30. scoca ENSDARG00000087333 1739 1.613 - - - 0.833 - - - 0.780 - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
31. CASKIN1 ENSDARG00000046107 201 1.613 - 0.865 - - - 0.748 - - - CASK interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-071115-3]
32. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.608 0.785 0.823 - - - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
33. scamp5 scamp5 797 1.599 - - - 0.748 - 0.851 - - -
34. FCHSD2_1 FCHSD2_1 14 1.583 0.740 0.843 - - - - - - -
35. SNORA81 SNORA81 47 1.578 0.813 0.765 - - - - - - -
36. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.572 - - - 0.814 - 0.758 - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
37. zgc:113209 ENSDARG00000100294 176 1.569 - - - - - 0.724 - 0.845 - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
38. CU638740.1_1 CU638740.1_1 387 1.56 - - - 0.818 - - - 0.742 -
39. wdr32 ENSDARG00000029600, ENSDARG00000110405 607 1.56 - 0.795 - - - 0.765 - - - WD repeat domain 32 [Source:ZFIN;Acc:ZDB-GENE-040426-2314]
40. carf ENSDARG00000019950 303 1.557 0.753 - - - - - - 0.804 - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
41. VPS37B_1 VPS37B_1 1816 1.557 - - - 0.851 - - - 0.706 -
42. adora1 adora1 149 1.555 0.793 - - - - 0.762 - - -
43. C8H1orf106 C8H1orf106 2690 1.545 - - - 0.826 - 0.719 - - -
44. cradd ENSDARG00000028192 153 1.544 - 0.776 - - - - 0.768 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
45. DOK2 ENSDARG00000075818 8 1.541 - - - - - 0.748 0.793 - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
46. slc4a4b ENSDARG00000044808 9 1.533 0.740 - - - - - 0.793 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
47. GEMIN6 ENSDARG00000105394 130 1.513 - 0.758 - - - - 0.755 - - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
48. ENTHD1 ENTHD1 235 1.502 - 0.770 - - - 0.732 - - -
49. ncapg2 ENSDARG00000060023 993 1.501 - - - 0.795 - 0.706 - - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
50. mapre3a ENSDARG00000020231 100 1.488 0.740 - - - - 0.748 - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
51. CHST15 ENSDARG00000074527 210 1.481 0.740 0.741 - - - - - - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
52. gpr61 ENSDARG00000055570 128 1.468 - - - - - 0.731 0.737 - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
53. nkx6.1 ENSDARG00000022569 3779 1.458 - - - 0.705 - 0.753 - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
54. pip4k2aa ENSDARG00000003776 865 1.458 - - - 0.702 - - - 0.756 - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
55. strn4 ENSDARG00000102902 24 1 - - - - - - 1.000 - - striatin, calmodulin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-070501-3]
56. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - 1.000 - - - - - - -
57. kcnk10a ENSDARG00000062849 28 1 - - - - - - 1.000 - - potassium channel, subfamily K, member 10a [Source:ZFIN;Acc:ZDB-GENE-041210-291]
58. CU459095.1 CU459095.1 7 1 - 1.000 - - - - - - -
59. ddhd2 ENSDARG00000076765 29 1 - 1.000 - - - - - - - DDHD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080519-4]
60. larsa ENSDARG00000090988 26 1 - 1.000 - - - - - - - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
61. atp8a1 ENSDARG00000063001 146 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]
62. cilp2 ENSDARG00000013687 70 1 - - - - - - 1.000 - - cartilage intermediate layer protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-436]
63. CABZ01078767.1 ENSDARG00000117816 10 1 - - - - - - 1.000 - -
64. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1 - 1.000 - - - - - - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
65. mxb ENSDARG00000004953 3 1 - - - - - - 1.000 - - myxovirus (influenza) resistance B [Source:ZFIN;Acc:ZDB-GENE-030721-6]
66. bicc2 ENSDARG00000076557 77 1 - - - - - 1.000 - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
67. hnf1a ENSDARG00000009470 60 1 - 1.000 - - - - - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
68. trim3a ENSDARG00000063711 44 1 - 1.000 - - - - - - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
69. si:dkey-4c15.13 ENSDARG00000095704 13 1 - 1.000 - - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
70. iqcc ENSDARG00000092483 65 1 - 1.000 - - - - - - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
71. CU570983.1 CU570983.1 83 1 - 1.000 - - - - - - -
72. ptk6b ENSDARG00000059956 44 0.998 - - - 0.998 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
73. gnav1 ENSDARG00000043006 305 0.998 - - - 0.998 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
74. tuba7l ENSDARG00000104643 33 0.998 - - - 0.998 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
75. ppfia2 ENSDARG00000013000 45 0.998 - - - 0.998 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
76. nr4a2b ENSDARG00000044532 103 0.998 - - - 0.998 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
77. SYNGAP1_1 SYNGAP1_1 66 0.997 - - - 0.997 - - - - -
78. ZCCHC2 ENSDARG00000067950 204 0.997 - - - 0.997 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
79. ulk3 ENSDARG00000101661 69 0.997 - - - 0.997 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
80. CU639413.2 CU639413.2 33 0.997 - - - 0.997 - - - - -
81. HTRA4 ENSDARG00000005943 77 0.997 - - - 0.997 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
82. tmem104 ENSDARG00000088560 859 0.997 - - - 0.997 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
83. slc3a1 ENSDARG00000017165 136 0.996 - - - 0.996 - - - - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
84. si:dkey-100n10.2 101 0.996 - - - 0.996 - - - - - si:dkey-100n10.2
85. wasb ENSDARG00000026350 139 0.996 - - - 0.996 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
86. zgc:165525 zgc:165525 207 0.995 - - - 0.995 - - - - -
87. si:ch1073-127d16.1 ENSDARG00000087674 105 0.995 - - - 0.995 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
88. ADCY3 ADCY3 537 0.995 - - - 0.995 - - - - -
89. eef1a1a ENSDARG00000039502 234 0.994 - - - 0.994 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
90. dpf2 ENSDARG00000012219 666 0.994 - - - 0.994 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
91. si:dkey-283b15.3 si:dkey-283b15.3 81 0.994 - - - 0.994 - - - - -
92. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.993 - - - 0.993 - - - - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
93. BX000999.4_1 BX000999.4_1 222 0.992 - - - 0.992 - - - - -
94. pomcb ENSDARG00000069307 72 0.992 - - - 0.992 - - - - - proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
95. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.992 - - - 0.992 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
96. cep76 ENSDARG00000058319 143 0.992 - - - 0.992 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
97. GPR180 73 0.991 - - - 0.991 - - - - - G protein-coupled receptor 180, transcript variant X2
98. PARP12 PARP12 77 0.991 - - - 0.991 - - - - -
99. JMJD1C JMJD1C 289 0.991 - - - 0.991 - - - - -
100. TTC17 ENSDARG00000044812 124 0.991 - - - 0.991 - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]

There are 1651 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA