Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rxraa

Gene Name Gene ID Reads Annotation
rxraa ENSDARG00000057737 750 retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]










Genes with expression patterns similar to rxraa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rxraa ENSDARG00000057737 750 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
2. bmp7a ENSDARG00000018260 92 2.169 - - - 0.750 - 0.717 0.702 - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
3. ppwd1 ENSDARG00000063161 752 1.896 - - 0.978 - - - 0.918 - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-16]
4. bmp7b ENSDARG00000063230 337 1.792 - - 0.992 0.800 - - - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
5. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.753 - - 0.991 - - - 0.762 - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
6. SVIL SVIL 2589 1.749 - - 0.947 - - 0.802 - - -
7. ZPLXDC2 ZPLXDC2 1298 1.747 - - 0.992 0.755 - - - - -
8. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.732 - - 0.991 - - 0.741 - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
9. ctdsp1 ENSDARG00000040674 2828 1.73 - - 0.973 - - 0.757 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
10. pak4 ENSDARG00000018110 1962 1.729 - - 0.920 - - 0.809 - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
11. gna13a ENSDARG00000073765 925 1.728 - - 0.988 0.740 - - - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
12. rmi1 ENSDARG00000041376 674 1.719 - - 0.993 - - - - - 0.726 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
13. pdlim1 ENSDARG00000019845 5765 1.682 - - 0.849 - - 0.833 - - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
14. GPR112 GPR112 515 1.681 - 0.815 - - - 0.866 - - -
15. sptbn2 ENSDARG00000053956 8452 1.678 - - 0.902 - - 0.776 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
16. dynlt1 ENSDARG00000045909 2451 1.652 - - 0.938 - - - 0.714 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
17. gdf10b ENSDARG00000073891 116 1.617 - - - 0.837 - - - 0.780 - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
18. daam1a ENSDARG00000015059 1460 1.604 - 0.726 - - - 0.878 - - - dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
19. lrrc17 ENSDARG00000037960 1585 1.587 - - - - - 0.789 - - 0.798 leucine rich repeat containing 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9774]
20. SZT2 252 1.574 - 0.864 - - - 0.710 - - - seizure threshold 2 homolog (mouse)
21. NID2 NID2 5282 1.56 - - - 0.751 - - - - 0.809
22. CR762484.3 CR762484.3 395 1.555 - - - - - - - 0.801 0.754
23. TMEM14A ENSDARG00000095157 611 1.555 - 0.824 - - - - - - 0.731 transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
24. cln6a ENSDARG00000077584 1090 1.545 - - - - - - 0.712 - 0.833 CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
25. zgc:163143 ENSDARG00000076437 166 1.54 - - - 0.783 - - 0.757 - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
26. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.532 - - - - - 0.796 - - 0.736 rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
27. BX005001.1 BX005001.1 741 1.526 - - - 0.780 - 0.746 - - -
28. efcab2 ENSDARG00000074323 88 1.526 - - - 0.823 - - 0.703 - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
29. C5H9orf117 C5H9orf117 88 1.525 - - - 0.775 - - - - 0.750
30. sav1 ENSDARG00000006196 1201 1.505 - - - - - 0.729 0.776 - - salvador family WW domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-040912-28]
31. etv5b ENSDARG00000044511, ENSDARG00000113744 1967 1.489 - - - 0.759 - 0.730 - - - ets variant 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]
32. rras ENSDARG00000006553 1665 1.487 - 0.777 - - - - - - 0.710 RAS related [Source:ZFIN;Acc:ZDB-GENE-041010-217]
33. BX890577.1 BX890577.1 257 1.473 - - - 0.732 - - - - 0.741
34. ca10a ENSDARG00000052644 216 1.467 - - - 0.764 - - - - 0.703 carbonic anhydrase Xa [Source:ZFIN;Acc:ZDB-GENE-051030-123]
35. tor1 ENSDARG00000077950 1027 1.465 - 0.738 - - - 0.727 - - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
36. CU929225.1 CU929225.1 104 1.464 - - - - - - - 0.701 0.763
37. lss ENSDARG00000061274 68 1.464 - - - - - - - 0.734 0.730 lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
38. st14b ENSDARG00000044655 415 1.46 - 0.718 - - - - - - 0.742 suppression of tumorigenicity 14 (colon carcinoma) b [Source:ZFIN;Acc:ZDB-GENE-061103-613]
39. pou5f3 ENSDARG00000044774 212 1.44 - - - 0.706 - - 0.734 - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
40. spon2b ENSDARG00000002732 115 1.438 - - - 0.720 - - - - 0.718 spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
41. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.429 - - - 0.726 - - 0.703 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
42. rassf7b ENSDARG00000003193 460 1.427 - - - 0.716 - 0.711 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7b [Source:ZFIN;Acc:ZDB-GENE-030429-1]
43. eda ENSDARG00000074591, ENSDARG00000113529 263 0.995 - - 0.995 - - - - - - ectodysplasin A [Source:ZFIN;Acc:ZDB-GENE-050107-6]
44. cttnbp2nl cttnbp2nl 166 0.994 - - 0.994 - - - - - -
45. NUDT8 ENSDARG00000007722 329 0.994 - - 0.994 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
46. C22H19orf44 C22H19orf44 481 0.994 - - 0.994 - - - - - -
47. ftr78 ftr78 273 0.994 - - 0.994 - - - - - -
48. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.994 - - 0.994 - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
49. scd ENSDARG00000033662 146 0.994 - - 0.994 - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
50. CABZ01112647.1 CABZ01112647.1 147 0.993 - - 0.993 - - - - - -
51. coro7 ENSDARG00000089616 2141 0.993 - - 0.993 - - - - - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
52. si:ch211-59h6.1 ENSDARG00000013022 193 0.993 - - 0.993 - - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
53. pcbp2 ENSDARG00000099039 4248 0.993 - - 0.993 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
54. ZNF648 ENSDARG00000104823 194 0.993 - - 0.993 - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
55. atxn7l3 ENSDARG00000029331 531 0.993 - - 0.993 - - - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
56. nsun2 ENSDARG00000056665 740 0.993 - - 0.993 - - - - - - NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
57. fam92a1 ENSDARG00000004436 658 0.993 - - 0.993 - - - - - - family with sequence similarity 92, member A1 [Source:ZFIN;Acc:ZDB-GENE-040801-123]
58. syt11a ENSDARG00000057913 1145 0.992 - - 0.992 - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
59. nckipsd ENSDARG00000079475 777 0.992 - - 0.992 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
60. med13b ENSDARG00000003910 1143 0.992 - - 0.992 - - - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
61. CT027778.1 CT027778.1 265 0.992 - - 0.992 - - - - - -
62. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.992 - - 0.992 - - - - - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
63. dtwd1 ENSDARG00000111509 347 0.992 - - 0.992 - - - - - - DTW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-23]
64. tmem231 ENSDARG00000042272 557 0.992 - - 0.992 - - - - - - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
65. TCAIM ENSDARG00000079881 424 0.992 - - 0.992 - - - - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
66. ARHGAP23 ARHGAP23 3946 0.992 - - 0.992 - - - - - -
67. trim3b ENSDARG00000005397 680 0.992 - - 0.992 - - - - - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
68. nf1b ENSDARG00000004184 548 0.992 - - 0.992 - - - - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
69. nbeal2 ENSDARG00000098641 1243 0.992 - - 0.992 - - - - - - neurobeachin-like 2 [Source:ZFIN;Acc:ZDB-GENE-100922-283]
70. ercc2 ENSDARG00000021985 678 0.992 - - 0.992 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
71. srp19 ENSDARG00000035699 2624 0.992 - - 0.992 - - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
72. sgce ENSDARG00000012138 912 0.991 - - 0.991 - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
73. flr ENSDARG00000038024 562 0.991 - - 0.991 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
74. pnpo ENSDARG00000017612, ENSDARG00000109509 570 0.991 - - 0.991 - - - - - - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
75. NFRKB ENSDARG00000091512 646 0.991 - - 0.991 - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
76. cxxc1 cxxc1 914 0.991 - - 0.991 - - - - - -
77. g6pca.1 ENSDARG00000031616 401 0.991 - - 0.991 - - - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
78. ISCA2 ENSDARG00000038154 489 0.991 - - 0.991 - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
79. ELOVL4 ELOVL4 3026 0.991 - - 0.991 - - - - - -
80. gak ENSDARG00000090654 695 0.991 - - 0.991 - - - - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
81. fam135a ENSDARG00000059843 2352 0.991 - - 0.991 - - - - - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
82. sec22a ENSDARG00000078328 1207 0.991 - - 0.991 - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
83. trpc4apb ENSDARG00000020647 670 0.991 - - 0.991 - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
84. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.991 - - 0.991 - - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
85. syn1 ENSDARG00000060368, ENSDARG00000111164 397 0.991 - - 0.991 - - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
86. arl8bb ENSDARG00000070318 1428 0.99 - - 0.990 - - - - - - ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
87. ORC2 ENSDARG00000101465 399 0.99 - - 0.990 - - - - - - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
88. tmem222a ENSDARG00000069589 1766 0.99 - - 0.990 - - - - - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
89. psd3l ENSDARG00000104820 1201 0.99 - - 0.990 - - - - - - pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
90. pou3f2a ENSDARG00000070220 817 0.99 - - 0.990 - - - - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
91. tm9sf4 ENSDARG00000002536 1684 0.99 - - 0.990 - - - - - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
92. gpatch2 1221 0.99 - - 0.990 - - - - - - G patch domain containing 2, transcript variant X1
93. thbs3b ENSDARG00000012060 922 0.99 - - 0.990 - - - - - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
94. zgc:66472 ENSDARG00000075916 635 0.99 - - 0.990 - - - - - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
95. HAUS2 HAUS2 392 0.989 - - 0.989 - - - - - -
96. psen2 ENSDARG00000015540 832 0.989 - - 0.989 - - - - - - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
97. taf1 ENSDARG00000035330 912 0.989 - - 0.989 - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
98. lrrc8a lrrc8a 674 0.989 - - 0.989 - - - - - -
99. ZNF576 ZNF576 1447 0.988 - - 0.988 - - - - - -
100. CR387996.2 CR387996.2 1272 0.988 - - 0.988 - - - - - -

There are 1197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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