Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rufy2

Gene Name Gene ID Reads Annotation
rufy2 ENSDARG00000062019, ENSDARG00000116213, ENSDARG00000116286 409 RUN and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070424-66]










Genes with expression patterns similar to rufy2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rufy2 ENSDARG00000062019, ENSDARG00000116213, ENSDARG00000116286 409 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RUN and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070424-66]
2. TTC37 ENSDARG00000074314 356 1.776 - - - - - - 0.882 0.894 - tetratricopeptide repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-110125-2]
3. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 1.732 - - - - - - 0.818 0.914 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
4. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 1.725 - 0.821 - - - - - 0.904 - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
5. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 1.69 - - - - - - 0.787 0.903 - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
6. agpat6 agpat6 587 1.681 - - - - - - 0.863 0.818 -
7. znrf3 ENSDARG00000062573 205 1.675 - - - - - - 0.797 0.878 - zinc and ring finger 3 [Source:ZFIN;Acc:ZDB-GENE-070705-263]
8. csmd2 ENSDARG00000001559 203 1.606 - - - - - - 0.774 0.832 - CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]
9. SERTAD4 ENSDARG00000089795 791 1.602 0.858 - - - - - 0.744 - - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
10. C25H1orf51 C25H1orf51 2460 1.593 0.718 - - - - - 0.875 - -
11. CR631122.1 ENSDARG00000044534 8 1.56 0.746 - - - - - 0.814 - - protein RD3-like [Source:NCBI gene;Acc:100149591]
12. SHKBP1 ENSDARG00000105050 1139 1.556 0.819 0.737 - - - - - - - SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19214]
13. si:dkey-3d18.4 si:dkey-3d18.4 43 1.551 0.745 - - - - - 0.806 - -
14. CCNJ ENSDARG00000059917 115 1.549 0.731 - - - - - 0.818 - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
15. rab11fip1b ENSDARG00000036462 466 1.477 - 0.727 - - - - - 0.750 - RAB11 family interacting protein 1 (class I) b [Source:ZFIN;Acc:ZDB-GENE-091204-322]
16. fyco1a ENSDARG00000104500 652 1.475 - 0.747 - - - - 0.728 - - FYVE and coiled-coil domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-110411-276]
17. CU179656.1 ENSDARG00000107086 270 1.475 - - - - - 0.714 0.761 - -
18. mlec ENSDARG00000059630 2057 1.469 0.747 0.722 - - - - - - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
19. si:ch211-161h7.8 ENSDARG00000089919 60 1.468 0.746 - - - - - 0.722 - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
20. PARP14 PARP14 164 1.442 0.715 - - - - 0.727 - - -
21. cd40 ENSDARG00000054968 90 0.931 - - - - - - - 0.931 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
22. scarb1 ENSDARG00000101557 503 0.93 - - - - - - - 0.930 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
23. pex7 ENSDARG00000042553 409 0.929 0.929 - - - - - - - - peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
24. APOA4_2 APOA4_2 61 0.929 0.929 - - - - - - - -
25. rsrc1 ENSDARG00000033987 552 0.928 - - - - - - - 0.928 - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
26. pvrl4 155 0.928 0.928 - - - - - - - - poliovirus receptor-related 4
27. mogat2 ENSDARG00000019228 184 0.926 0.926 - - - - - - - - monoacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-186]
28. si:ch211-39k3.2 ENSDARG00000075881 531 0.925 - - - - - - - 0.925 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
29. d2hgdh ENSDARG00000060210 362 0.919 - - - - - - - 0.919 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
30. NGFR NGFR 186 0.918 - - - - - - - 0.918 -
31. frmd4bb ENSDARG00000076496 18 0.918 - - - - - - - 0.918 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
32. cyp1d1 ENSDARG00000035569 628 0.917 - - - - - - - 0.917 - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
33. pex11g ENSDARG00000025559 129 0.916 0.916 - - - - - - - - peroxisomal biogenesis factor 11 gamma [Source:ZFIN;Acc:ZDB-GENE-050913-79]
34. myl2b ENSDARG00000053424 226 0.916 - - - - - - 0.916 - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
35. nkx2.9 ENSDARG00000020332 357 0.913 - - - - - - - 0.913 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
36. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.913 - - - - - - - 0.913 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
37. POLRMT ENSDARG00000101220 215 0.91 - - - - - - - 0.910 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
38. ASTL ASTL 24 0.91 - - - - - - - 0.910 -
39. nlgn3b ENSDARG00000062376 171 0.91 - - - - - - - 0.910 - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
40. bhlha15 ENSDARG00000045166 67 0.909 - - - - - 0.909 - - - basic helix-loop-helix family, member a15 [Source:ZFIN;Acc:ZDB-GENE-070803-3]
41. CU855815.2 CU855815.2 80 0.909 - - - - - - - 0.909 -
42. slc30a4 ENSDARG00000007180 158 0.907 0.907 - - - - - - - - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
43. si:ch211-237l4.6 ENSDARG00000056915 49 0.906 - - - - - - - 0.906 - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
44. si:dkey-14a7.2 si:dkey-14a7.2 61 0.906 - - - - - - 0.906 - -
45. si:dkey-56e3.2 ENSDARG00000092551 835 0.906 0.906 - - - - - - - - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
46. GSTK1_1 GSTK1_1 316 0.906 - - - - - - - 0.906 -
47. MAN2C1 ENSDARG00000079835 305 0.906 - - - - - - - 0.906 - mannosidase, alpha, class 2C, member 1 [Source:ZFIN;Acc:ZDB-GENE-101103-4]
48. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.906 - - - - - - - 0.906 - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
49. smyd3 ENSDARG00000058050 69 0.905 - - - - - - - 0.905 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
50. CABZ01086801.1 CABZ01086801.1 41 0.903 - - - - - - - 0.903 -
51. zgc:113294 ENSDARG00000032285 132 0.903 - - - - - - - 0.903 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
52. crfb17 511 0.902 - - - - - - - 0.902 - cytokine receptor family member B17
53. cyp2k8 ENSDARG00000101190 69 0.902 - - - - - - - 0.902 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
54. RNF115 ENSDARG00000062450 83 0.902 - - - - - - - 0.902 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
55. BX511263.1 BX511263.1 64 0.902 - - - - - - - 0.902 -
56. zgc:174268 ENSDARG00000076807 250 0.901 - - - - - - - 0.901 - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
57. traf1 ENSDARG00000069482 50 0.901 - - - - - - - 0.901 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
58. si:dkey-93n13.2 ENSDARG00000092816 119 0.9 - - - - - - - 0.900 - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
59. si:dkey-14d8.2 38 0.9 - - - - - - - 0.900 - si:dkey-14d8.2
60. vti1b ENSDARG00000039270 295 0.9 - - - - - - 0.900 - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
61. cldn17 ENSDARG00000099950 14 0.899 - - - - - - 0.899 - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
62. hoxc13a ENSDARG00000070353 4815 0.899 - - - - - - 0.899 - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
63. fbxw2 ENSDARG00000009745 618 0.899 - - - - - - - 0.899 - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
64. pfkfb2a ENSDARG00000023840 184 0.898 - - - - - - - 0.898 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
65. rrp15 ENSDARG00000013478 1126 0.898 - - - - - - - 0.898 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
66. hdac6 ENSDARG00000008384 144 0.898 - - - - - - 0.898 - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
67. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.898 - - - - - - - 0.898 - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
68. TTF1_3 TTF1_3 215 0.897 - - - - - - - 0.897 -
69. znf511 ENSDARG00000000760 446 0.894 - - - - - - - 0.894 - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
70. gata1a ENSDARG00000013477, ENSDARG00000117116 902 0.891 - - - - - - - 0.891 - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
71. zgc:173726 ENSDARG00000077078 250 0.891 - - - - - - - 0.891 - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
72. si:dkey-70e17.2 si:dkey-70e17.2 371 0.89 - - - - - - - 0.890 -
73. FEZ2_1 FEZ2_1 153 0.889 - - - - - - - 0.889 -
74. MAP6 MAP6 643 0.889 - - - - - - - 0.889 -
75. zgc:92907 ENSDARG00000011026 986 0.888 - - - - - - - 0.888 - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
76. GPRIN3 GPRIN3 169 0.888 - - - - - - - 0.888 -
77. sc:d0413 sc:d0413 121 0.887 - - - - - - 0.887 - -
78. KDM5A ENSDARG00000104567 450 0.886 - - - - - - - 0.886 - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
79. pdk3b ENSDARG00000099791 50 0.886 - - - - - - 0.886 - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
80. dok1b ENSDARG00000099177 163 0.885 - - - - - - - 0.885 - docking protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2063]
81. plk2a ENSDARG00000090752 392 0.884 - - - - - - - 0.884 - polo-like kinase 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060810-71]
82. prkag2 prkag2 355 0.882 - - - - - - - 0.882 -
83. DSP DSP 199 0.881 - - - - - - - 0.881 -
84. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 0.88 - - - - - - 0.880 - - PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
85. si:ch73-22b20.4 si:ch73-22b20.4 283 0.879 - 0.879 - - - - - - -
86. NFAT5 NFAT5 62 0.877 - - - - - - 0.877 - -
87. trpm4 trpm4 501 0.877 0.877 - - - - - - - -
88. si:ch73-191k20.3 ENSDARG00000094206 104 0.877 - - - - - - - 0.877 - si:ch73-191k20.3 [Source:ZFIN;Acc:ZDB-GENE-090312-62]
89. CLMN ENSDARG00000096867 73 0.877 - - - - - - - 0.877 - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
90. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.876 - - - - - - 0.876 - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
91. si:dkey-47k16.4 ENSDARG00000113005 87 0.874 - - - - - - 0.874 - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
92. si:rp71-1i20.2 ENSDARG00000043198 113 0.874 - - - - - - - 0.874 - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
93. tmtc2 tmtc2 798 0.873 - - - - - - - 0.873 -
94. elp4 ENSDARG00000008852 253 0.873 - - - - - - - 0.873 - elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
95. fgf4 ENSDARG00000105230 407 0.872 - - - - - - - 0.872 - fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]
96. slc9a8 ENSDARG00000020699 206 0.872 - - - - - - - 0.872 - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
97. FRG1 ENSDARG00000056504 1196 0.869 0.869 - - - - - - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
98. zfand2a ENSDARG00000103511 829 0.868 - - - - - - - 0.868 - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
99. mysm1 ENSDARG00000034693 291 0.868 - - - - - - - 0.868 - Myb-like, SWIRM and MPN domains 1 [Source:ZFIN;Acc:ZDB-GENE-041014-28]
100. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.868 - - - - - - 0.868 - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]

There are 771 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA