Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rtn4rl1a

Gene Name Gene ID Reads Annotation
rtn4rl1a ENSDARG00000007856 242 reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]










Genes with expression patterns similar to rtn4rl1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rtn4rl1a ENSDARG00000007856 242 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]
2. ENSDARG00000023499 ENSDARG00000023499 395 1.708 0.826 - - - - - 0.882 - -
3. brip1 ENSDARG00000074410, ENSDARG00000113993 501 1.68 - 0.768 - - - - 0.912 - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
4. CABZ01073405.1 CABZ01073405.1 275 1.671 - 0.892 - - - 0.779 - - -
5. si:ch211-229b6.1 ENSDARG00000093422 151 1.63 - - - - 0.757 - 0.873 - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
6. crfb5 crfb5 342 1.627 - - - - - 0.765 0.862 - -
7. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 1.627 0.711 - - - - - 0.916 - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
8. abca4a ENSDARG00000057169 27 1.615 - - - - - 0.764 0.851 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
9. mxtx1 ENSDARG00000069382 32 1.614 - - - - - 0.764 0.850 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
10. si:dkey-243i1.1 ENSDARG00000034227 257 1.606 - - - - - 0.766 0.840 - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
11. PEG3_11 PEG3_11 167 1.603 - 0.761 - - - 0.842 - - -
12. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 1.603 0.733 - - - - - 0.870 - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
13. arsk ENSDARG00000059714, ENSDARG00000115105 31 1.597 - 0.775 - - - 0.822 - - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
14. chic1 ENSDARG00000053166 210 1.585 0.737 - - - - - 0.848 - - cysteine-rich hydrophobic domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7763]
15. tmem79b ENSDARG00000076861 154 1.585 - 0.806 - - - 0.779 - - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
16. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 1.577 - 0.751 - - - - 0.826 - - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
17. stx11a ENSDARG00000044039 39 1.573 - 0.775 - - - - 0.798 - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
18. slc27a6 ENSDARG00000046053 57 1.554 0.732 0.822 - - - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
19. otof otof 127 1.55 - - - - - 0.766 0.784 - -
20. plcd1a ENSDARG00000059123 46 1.548 - 0.776 - - - 0.772 - - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
21. gpr37b ENSDARG00000033296 283 1.541 - 0.765 - - - - 0.776 - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
22. senp5 ENSDARG00000060646 303 1.529 - 0.737 - - - - 0.792 - - SUMO specific peptidase 5 [Source:ZFIN;Acc:ZDB-GENE-050208-772]
23. NECAB3 ENSDARG00000074794 379 1.521 0.787 0.734 - - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
24. rpain ENSDARG00000063021 186 1.518 0.786 - - - - 0.732 - - - RPA interacting protein [Source:ZFIN;Acc:ZDB-GENE-060825-212]
25. ndst3 ENSDARG00000041776 605 1.516 0.787 - - - - - 0.729 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
26. CLINT1 CLINT1 558 1.512 0.754 - - - - 0.758 - - -
27. fam206a ENSDARG00000070407 537 1.509 0.778 0.731 - - - - - - - family with sequence similarity 206, member A [Source:ZFIN;Acc:ZDB-GENE-060503-602]
28. mmrn2b ENSDARG00000073711 391 1.508 - - - - - 0.739 0.769 - - multimerin 2b [Source:ZFIN;Acc:ZDB-GENE-080415-2]
29. zgc:63831 ENSDARG00000009313 895 1.49 - - - - - 0.786 0.704 - - zgc:63831 [Source:ZFIN;Acc:ZDB-GENE-030131-8690]
30. prkacab ENSDARG00000016809 1441 1.484 0.745 - - - - 0.739 - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
31. SRR SRR 544 1.479 0.726 0.753 - - - - - - -
32. prkx ENSDARG00000060716 530 1.475 - - - - - 0.716 0.759 - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
33. si:ch211-254n4.3 ENSDARG00000020292 85 1.471 - 0.763 - - - 0.708 - - - si:ch211-254n4.3 [Source:ZFIN;Acc:ZDB-GENE-081105-89]
34. inadl 80 1.471 - 0.702 - - - 0.769 - - - InaD-like (Drosophila), transcript variant X4
35. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1.465 0.701 - - - - 0.764 - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
36. sh3bp5a ENSDARG00000100529 642 1.462 - 0.724 - - - 0.738 - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
37. skap2 ENSDARG00000000906 146 1.454 - 0.730 - - - 0.724 - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
38. cox16 ENSDARG00000039136 1066 1.451 0.723 0.728 - - - - - - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
39. usp40 ENSDARG00000071197 825 1.449 - 0.748 - - - 0.701 - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
40. SPA17 ENSDARG00000069361 141 1.438 - 0.738 - - - - 0.700 - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
41. PEG3_4 PEG3_4 256 1.43 0.727 - - - - 0.703 - - -
42. nudcd1 ENSDARG00000036158 608 1.425 0.713 - - - - - 0.712 - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
43. ZNF337_4 ZNF337_4 409 0.94 - - - - - - 0.940 - -
44. SPAG9 ENSDARG00000078142 629 0.929 - - - - - - 0.929 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
45. CR407594.2 CR407594.2 145 0.929 - - - - - - 0.929 - -
46. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.918 - - - - - - 0.918 - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
47. nptnb ENSDARG00000043864 165 0.915 - 0.915 - - - - - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
48. ITPK1 ITPK1 78 0.913 - - - - - - 0.913 - -
49. BX571811.1 ENSDARG00000105621 25 0.911 - - - - - - 0.911 - -
50. plk4 ENSDARG00000004576 688 0.908 0.908 - - - - - - - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
51. necap1 ENSDARG00000020798 612 0.906 - 0.906 - - - - - - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
52. cherp ENSDARG00000021812 286 0.906 - - - - - - 0.906 - - calcium homeostasis endoplasmic reticulum protein [Source:ZFIN;Acc:ZDB-GENE-040407-1]
53. mtx3 ENSDARG00000090195 42 0.905 - - - - - - 0.905 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
54. eme1 ENSDARG00000076913 376 0.902 - - - - - 0.902 - - - essential meiotic structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3191]
55. ppp1r37 ENSDARG00000078458 49 0.901 - 0.901 - - - - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
56. AL954372.1_1 ENSDARG00000112499 57 0.901 - 0.901 - - - - - - -
57. si:ch211-212k5.2 si:ch211-212k5.2 152 0.901 - 0.901 - - - - - - -
58. BX511021.3 ENSDARG00000117414 592 0.9 - 0.900 - - - - - - -
59. ASPH ENSDARG00000055945 214 0.899 - - - - - - 0.899 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
60. tjap1 ENSDARG00000010681 457 0.899 - - - - - - 0.899 - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
61. si:ch211-110p13.9 ENSDARG00000093821 82 0.896 - - - - - - 0.896 - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
62. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 0.896 - - - - - - 0.896 - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
63. CABZ01060030.1 ENSDARG00000106579 55 0.895 - 0.895 - - - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
64. acss1 ENSDARG00000044142, ENSDARG00000109700 516 0.895 - - - - - - 0.895 - - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
65. CR387997.1 CR387997.1 190 0.894 - - - - - 0.894 - - -
66. PKN2 ENSDARG00000101293 358 0.892 - - - - - - 0.892 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
67. mapk8ip3 ENSDARG00000062531 631 0.887 - - - - - 0.887 - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-090303-6]
68. yjefn3 ENSDARG00000061692 211 0.887 - - - - - - 0.887 - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
69. gas7a ENSDARG00000074443, ENSDARG00000111294 250 0.887 - - - - - - 0.887 - - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
70. agps ENSDARG00000042821 203 0.886 - - - - - - 0.886 - - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
71. rin1a ENSDARG00000079095 99 0.886 - - - - - - 0.886 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
72. gpn2 ENSDARG00000103127 304 0.886 - - - - - - 0.886 - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
73. mpnd ENSDARG00000061989 817 0.885 - 0.885 - - - - - - - MPN domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-1162]
74. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.885 - - - - - - 0.885 - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
75. C4H12orf45 C4H12orf45 483 0.885 - - - - - - 0.885 - -
76. zgc:153722 ENSDARG00000071044, ENSDARG00000110778, ENSDARG00000113166 70 0.884 - 0.884 - - - - - - - zgc:153722 [Source:ZFIN;Acc:ZDB-GENE-060929-84]
77. otud4 ENSDARG00000077810 120 0.882 - - - - - - 0.882 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
78. si:dkey-102g19.3 ENSDARG00000086337 26 0.882 - - - - - - 0.882 - - si:dkey-102g19.3 [Source:ZFIN;Acc:ZDB-GENE-091204-230]
79. CR478286.1_1 CR478286.1_1 306 0.882 - 0.882 - - - - - - -
80. zgc:171489 ENSDARG00000052300 119 0.882 - - - - - - 0.882 - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
81. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.88 - - - - - - 0.880 - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
82. MAP1S_1 MAP1S_1 1117 0.879 - - - - - - 0.879 - -
83. thtpa ENSDARG00000063049 286 0.879 - - - - - - 0.879 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
84. gstcd ENSDARG00000036494 95 0.878 - 0.878 - - - - - - - glutathione S-transferase, C-terminal domain containing [Source:ZFIN;Acc:ZDB-GENE-050320-41]
85. macrod1 ENSDARG00000029609 66 0.878 - - - - - - 0.878 - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
86. atrnl1b ENSDARG00000006420 641 0.878 - - - - - - 0.878 - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
87. sphkap ENSDARG00000017429 60 0.877 - - - - - 0.877 - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
88. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 0.877 - 0.877 - - - - - - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
89. RAB43 ENSDARG00000059404 170 0.877 - - - - - - 0.877 - - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
90. myo3a ENSDARG00000010186 117 0.876 - - - - - - 0.876 - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
91. FAM188B FAM188B 145 0.875 - - - - - - 0.875 - -
92. illr4 ENSDARG00000008075 164 0.875 - 0.875 - - - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
93. spire1a ENSDARG00000035868, ENSDARG00000109651 185 0.874 0.874 - - - - - - - - spire-type actin nucleation factor 1a [Source:ZFIN;Acc:ZDB-GENE-061013-119]
94. PPP1R15B ENSDARG00000068128, ENSDARG00000114787 112 0.873 - 0.873 - - - - - - - protein phosphatase 1, regulatory subunit 15B [Source:ZFIN;Acc:ZDB-GENE-030829-40]
95. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.872 - - - - - - 0.872 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
96. si:dkey-7l6.3 ENSDARG00000094514 146 0.872 - - - - - - 0.872 - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
97. aif1l ENSDARG00000009336 1340 0.871 - - - - - 0.871 - - - allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]
98. xrcc1 ENSDARG00000009494 1346 0.871 - - - - - - 0.871 - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
99. hbp1 ENSDARG00000028517 571 0.871 - - - - - - 0.871 - - HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]
100. knop1 ENSDARG00000077721 2198 0.871 - - - - - - 0.871 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]

There are 933 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA