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Results for rtn4ip1

Gene Name Gene ID Reads Annotation
rtn4ip1 ENSDARG00000031366 388 reticulon 4 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1314]










Genes with expression patterns similar to rtn4ip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rtn4ip1 ENSDARG00000031366 388 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 reticulon 4 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1314]
2. pdss1 ENSDARG00000017910 1290 1.665 - - - - - 0.885 0.780 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
3. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 1.648 0.837 - - - - - - 0.811 - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
4. NRD1 NRD1 3486 1.592 0.795 - - - - 0.797 - - -
5. GSTK1_1 GSTK1_1 316 1.568 - - - - - - 0.828 0.740 -
6. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 1.555 - - - - - - 0.776 0.779 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
7. fam78a fam78a 238 1.544 0.776 - - - - - 0.768 - -
8. egln1 egln1 3746 1.524 - - - - - 0.810 0.714 - -
9. C13H10orf11 1209 1.518 - - - - - - 0.748 0.770 - c13h10orf11 homolog (H. sapiens), transcript variant X2
10. ints9 ENSDARG00000067913 600 1.494 - - - - - - 0.712 0.782 - integrator complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-061013-129]
11. ccdc58 ENSDARG00000045351 972 1.492 - - - - - 0.760 0.732 - - coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
12. mtif2 ENSDARG00000063213, ENSDARG00000113856 377 1.487 - - - - - 0.775 0.712 - - mitochondrial translational initiation factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1092]
13. cox4i1l ENSDARG00000012388 584 1.482 - - - - - 0.755 0.727 - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
14. lgals2a ENSDARG00000054942 888 1.466 - - - - - 0.760 0.706 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
15. bmpr1bb ENSDARG00000102742 1036 1.463 - - - - - 0.723 0.740 - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
16. hdr ENSDARG00000004392 351 1.446 - - - - - 0.709 0.737 - - hematopoietic death receptor [Source:ZFIN;Acc:ZDB-GENE-030826-5]
17. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 1.443 - - - - - 0.734 0.709 - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
18. ATP5J_2 ATP5J_2 2381 1.422 - - - - - 0.719 0.703 - -
19. pex13 ENSDARG00000071037 738 0.927 - 0.927 - - - - - - - peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
20. jph1a ENSDARG00000058603 2852 0.907 - - - - - 0.907 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
21. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.905 - - - - - 0.905 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
22. zbtb7a ENSDARG00000039899 577 0.897 - - - - - - - 0.897 - zinc finger and BTB domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-050208-583]
23. dnajc4 ENSDARG00000024090, ENSDARG00000114838 403 0.89 - - - - - - - 0.890 - DnaJ (Hsp40) homolog, subfamily C, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3093]
24. cenph ENSDARG00000094892 416 0.881 - 0.881 - - - - - - - centromere protein H [Source:ZFIN;Acc:ZDB-GENE-081104-340]
25. grem2 grem2 743 0.878 - - - - - 0.878 - - -
26. fgd6 ENSDARG00000045528 224 0.876 - - - - - - 0.876 - - FYVE, RhoGEF and PH domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041210-200]
27. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 0.871 - - - - - - 0.871 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
28. ccm2l ENSDARG00000063089 100 0.868 - - - - - - 0.868 - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
29. cspg4 ENSDARG00000078227 1084 0.864 - - - - - 0.864 - - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
30. ryr3 ENSDARG00000071331 6795 0.863 - - - - - 0.863 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
31. ptpn11b ENSDARG00000012340, ENSDARG00000114232 604 0.863 - - - - - - 0.863 - - protein tyrosine phosphatase, non-receptor type 11, b [Source:ZFIN;Acc:ZDB-GENE-040426-1158]
32. vps52 ENSDARG00000099258 780 0.862 - - - - - 0.862 - - - vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-010430-2]
33. egfl7 ENSDARG00000100657 776 0.859 - - - - - - 0.859 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
34. PITPNC1 ENSDARG00000099260 1096 0.858 - - - - - 0.858 - - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
35. RGL3 RGL3 422 0.851 - - - - - 0.851 - - -
36. si:ch211-102c2.4 ENSDARG00000079387 101 0.846 - - - - - - - 0.846 - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
37. fli1a ENSDARG00000054632 330 0.843 - - - - - - 0.843 - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
38. CU457815.1 ENSDARG00000115823 1005 0.841 - - - - - 0.841 - - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
39. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.84 - - - - - 0.840 - - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
40. foxd2 ENSDARG00000058133 1150 0.839 - - - - - - 0.839 - - forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
41. hoxd3a ENSDARG00000059280 1919 0.839 - 0.839 - - - - - - - homeobox D3a [Source:ZFIN;Acc:ZDB-GENE-990415-120]
42. aftpha ENSDARG00000069249 867 0.837 0.837 - - - - - - - - aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
43. zgc:158296 ENSDARG00000070923 3935 0.837 - - - - - 0.837 - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
44. CR392006.1 CR392006.1 1401 0.837 - - - - - 0.837 - - -
45. CT583658.1 CT583658.1 561 0.835 - - - - - - 0.835 - -
46. smpx ENSDARG00000045302 2175 0.834 - - - - - 0.834 - - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
47. FRMD5 ENSDARG00000075942 569 0.833 - - - - - 0.833 - - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
48. si:ch1073-184j22.2 ENSDARG00000078598 707 0.833 - - - - - 0.833 - - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
49. prkg1a ENSDARG00000020656 918 0.832 - - - - - 0.832 - - - protein kinase cGMP-dependent 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1308]
50. fitm1 ENSDARG00000056464 1759 0.832 - - - - - 0.832 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
51. CR450814.3 CR450814.3 608 0.832 - - - - - 0.832 - - -
52. spg7 ENSDARG00000068187 451 0.831 - - - - - - 0.831 - - spastic paraplegia 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5391]
53. sptb ENSDARG00000030490 7128 0.828 - - - - - 0.828 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
54. si:rp71-15d4.6 si:rp71-15d4.6 95 0.828 - 0.828 - - - - - - -
55. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 0.826 - - - - - 0.826 - - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
56. gtpbp1l ENSDARG00000042900 416 0.824 - - - - - - - 0.824 - GTP binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-041007-2]
57. mtmr1b ENSDARG00000022378 168 0.823 - - - - - 0.823 - - - myotubularin related protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-48]
58. pgm2l1 ENSDARG00000014704 140 0.822 - - - - - - - 0.822 - phosphoglucomutase 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-041008-205]
59. si:ch211-207e19.11 si:ch211-207e19.11 9604 0.821 - - - - - - 0.821 - -
60. N4BP2L1 N4BP2L1 573 0.821 - - - - - - - 0.821 -
61. SYNPO2 SYNPO2 7382 0.821 - - - - - 0.821 - - -
62. kif21a ENSDARG00000061131 913 0.821 - - - - - 0.821 - - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
63. smtnl1 ENSDARG00000041257 7410 0.821 - - - - - 0.821 - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
64. dnajc1 ENSDARG00000001940 2848 0.82 - - - - - 0.820 - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
65. hccsa hccsa 869 0.818 - - - - - - 0.818 - -
66. smyd1a ENSDARG00000009280 1503 0.818 - - - - - 0.818 - - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
67. arl8ba ENSDARG00000006915 720 0.818 - 0.818 - - - - - - - ADP-ribosylation factor-like 8Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9370]
68. mau2 ENSDARG00000042056 2378 0.816 - 0.816 - - - - - - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
69. myhc4 ENSDARG00000035438 1322 0.815 - - - - - 0.815 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
70. si:ch73-299h12.3 ENSDARG00000101790 590 0.815 - - - - - - 0.815 - - si:ch73-299h12.3 [Source:ZFIN;Acc:ZDB-GENE-081031-93]
71. dpy19l1l ENSDARG00000069995 584 0.814 - 0.814 - - - - - - - dpy-19-like 1, like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030521-11]
72. ddb2 ENSDARG00000041140, ENSDARG00000114723 827 0.813 - - - - - - 0.813 - - damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]
73. mitfa ENSDARG00000003732 1288 0.813 - - - - - - 0.813 - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
74. txlnbb ENSDARG00000076241 6396 0.813 - - - - - 0.813 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
75. trmu ENSDARG00000043734 291 0.813 - - - - - - 0.813 - - tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-540]
76. bag2 ENSDARG00000035005 1402 0.812 - - - - - 0.812 - - - BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
77. TMEM17 ENSDARG00000116334 218 0.812 - - - - - - - 0.812 - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
78. si:ch211-229n2.7 ENSDARG00000094088 410 0.812 - - - - - - - 0.812 - si:ch211-229n2.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8579]
79. zgc:92518 ENSDARG00000016343 3837 0.812 - - - - - 0.812 - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
80. phlda1 ENSDARG00000099129 711 0.812 0.812 - - - - - - - - pleckstrin homology-like domain, family A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041010-103]
81. zgc:92907 ENSDARG00000011026 986 0.811 - - - - - - - 0.811 - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
82. IGSF10 ENSDARG00000077497 317 0.811 - - - - - 0.811 - - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
83. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 0.81 - - - - - - 0.810 - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
84. zgc:77391 zgc:77391 1445 0.809 - 0.809 - - - - - - -
85. pdcd2l ENSDARG00000002754 417 0.809 - - - - - - 0.809 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
86. hmgcrb ENSDARG00000105206 2080 0.808 - - - - - 0.808 - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
87. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 0.808 - - - - - 0.808 - - - cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
88. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.807 - - - - - - 0.807 - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
89. cmss1 ENSDARG00000004727, ENSDARG00000112579 830 0.806 - - - - - - 0.806 - - cms1 ribosomal small subunit homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041010-146]
90. mpp6a ENSDARG00000056892 324 0.806 - - - - - 0.806 - - - membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-050506-35]
91. MAP6 MAP6 643 0.806 - - - - - - - 0.806 -
92. lmo2 ENSDARG00000095019 1098 0.805 - - - - - - 0.805 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
93. mrps9 ENSDARG00000061505 1636 0.805 - - - - - - 0.805 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
94. CABZ01018247.1 CABZ01018247.1 609 0.805 - - - - - - 0.805 - -
95. trdmt1 ENSDARG00000034518 169 0.805 - - - - - - 0.805 - - tRNA aspartic acid methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-041008-138]
96. asb5b ENSDARG00000053222 1207 0.804 - - - - - 0.804 - - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
97. mettl13 ENSDARG00000010905 168 0.804 - - - - - - 0.804 - - methyltransferase like 13 [Source:ZFIN;Acc:ZDB-GENE-060929-60]
98. BX005410.1 ENSDARG00000115561 373 0.803 - - - - - - 0.803 - - si:ch211-106j24.1 [Source:NCBI gene;Acc:555478]
99. afap1l1b ENSDARG00000056453 583 0.803 - - - - - 0.803 - - - actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]
100. arap3 ENSDARG00000076801 725 0.803 - - - - - - 0.803 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]

There are 613 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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