Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rtn4b

Gene Name Gene ID Reads Annotation
rtn4b ENSDARG00000104347 1 reticulon 4b [Source:ZFIN;Acc:ZDB-GENE-030710-2]










Genes with expression patterns similar to rtn4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U6_18 U6_18 12 1 - - 1.000 - - - - - -
2. CT573248.1 ENSDARG00000074029 10 1 - - 1.000 - - - - - -
3. tacr3a ENSDARG00000075112 1 1 - - 1.000 - - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
4. CU207245.1 ENSDARG00000102559 15 1 - - 1.000 - - - - - -
5. CR677591.1 CR677591.1 19 1 - - 1.000 - - - - - -
6. rtn4b ENSDARG00000104347 1 1 - - 1.000 - - - - - - reticulon 4b [Source:ZFIN;Acc:ZDB-GENE-030710-2]
7. CENPQ 8 0.954 - - 0.954 - - - - - - centromere protein Q
8. BX119910.3 BX119910.3 7 0.875 - - 0.875 - - - - - -
9. samd10b ENSDARG00000094377 18 0.871 - - 0.871 - - - - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
10. CABZ01076801.1 CABZ01076801.1 3 0.871 - - 0.871 - - - - - -
11. SBSPON ENSDARG00000110160 2 0.849 - - 0.849 - - - - - - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
12. si:ch73-287n15.1 si:ch73-287n15.1 20 0.818 - - 0.818 - - - - - -
13. foxg1d ENSDARG00000070053 32 0.814 - - 0.814 - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
14. lgalslb ENSDARG00000055525 18 0.811 - - 0.811 - - - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
15. SLC39A11 ENSDARG00000098194 23 0.791 - - 0.791 - - - - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
16. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 0.772 - - 0.772 - - - - - -
17. slc5a2 ENSDARG00000100919 47 0.764 - - 0.764 - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
18. rxfp1 ENSDARG00000090071 6 0.743 - - 0.743 - - - - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
19. kcnk15 ENSDARG00000077371 1 0.743 - - 0.743 - - - - - - potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
20. si:ch1073-162e11.2 si:ch1073-162e11.2 5 0.743 - - 0.743 - - - - - -
21. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 0.743 - - 0.743 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
22. CR848788.1 ENSDARG00000103037 1 0.743 - - 0.743 - - - - - -
23. BX548011.3 ENSDARG00000113526 2 0.743 - - 0.743 - - - - - -
24. zgc:109965 ENSDARG00000012126 11 0.743 - - 0.743 - - - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
25. CU929036.1 CU929036.1 7 0.743 - - 0.743 - - - - - -
26. slc6a14 ENSDARG00000029866 61 0.743 - - 0.743 - - - - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
27. ccnd3 ENSDARG00000027391 1 0.743 - - 0.743 - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
28. nptx2b ENSDARG00000045164 5 0.743 - - 0.743 - - - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
29. dock3 ENSDARG00000063180 2 0.743 - - 0.743 - - - - - - dedicator of cytokinesis 3 [Source:ZFIN;Acc:ZDB-GENE-100624-1]
30. gnat1 ENSDARG00000044199 251 0.743 - - 0.743 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
31. themis ENSDARG00000010619 5 0.743 - - 0.743 - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
32. CABZ01117474.1 CABZ01117474.1 2 0.743 - - 0.743 - - - - - -
33. erlec1 ENSDARG00000086309 1 0.743 - - 0.743 - - - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
34. si:ch211-166e11.1 si:ch211-166e11.1 1 0.743 - - 0.743 - - - - - -
35. guca1g ENSDARG00000045737, ENSDARG00000114717 22 0.743 - - 0.743 - - - - - - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
36. ft2 ENSDARG00000109567 5 0.743 - - 0.743 - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
37. sftpbb ENSDARG00000067566 13 0.743 - - 0.743 - - - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
38. crx ENSDARG00000011989, ENSDARG00000113850 330 0.743 - - 0.743 - - - - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
39. fam45a ENSDARG00000062965, ENSDARG00000115900 14 0.743 - - 0.743 - - - - - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
40. ENSDARG00000089816 ENSDARG00000089816 4 0.743 - - 0.743 - - - - - -
41. si:ch211-57i17.2 ENSDARG00000093354 58 0.743 - - 0.743 - - - - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
42. si:dkey-11f7.5 si:dkey-11f7.5 0 0.743 - - 0.743 - - - - - -
43. cnga3b ENSDARG00000012297 2 0.743 - - 0.743 - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
44. Metazoa_SRP_25 Metazoa_SRP_25 13 0.743 - - 0.743 - - - - - -
45. si:dkey-26c10.5 ENSDARG00000088023 9 0.743 - - 0.743 - - - - - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
46. CR759816.1 ENSDARG00000098977 27 0.743 - - 0.743 - - - - - -
47. rh50 ENSDARG00000041848 0 0.743 - - 0.743 - - - - - - Rh50-like protein [Source:ZFIN;Acc:ZDB-GENE-000427-1]
48. AL954698.2 ENSDARG00000102132 28 0.743 - - 0.743 - - - - - -
49. naa40_1 ENSDARG00000024109, ENSDARG00000090570 1 0.743 - - 0.743 - - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
50. olfcg4 ENSDARG00000099773 1 0.743 - - 0.743 - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
51. ptchd1 ENSDARG00000018066 3 0.743 - - 0.743 - - - - - - patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
52. CR450780.4 CR450780.4 0 0.743 - - 0.743 - - - - - -
53. crybb2 ENSDARG00000053512 15 0.743 - - 0.743 - - - - - - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
54. SLC1A7 SLC1A7 3 0.743 - - 0.743 - - - - - -
55. SH2D2A SH2D2A 31 0.743 - - 0.743 - - - - - -
56. C12H17orf62 C12H17orf62 4 0.743 - - 0.743 - - - - - -
57. si:ch211-223g7.2 ENSDARG00000103265 1 0.743 - - 0.743 - - - - - - si:ch211-223g7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-153]
58. snoU13 snoU13 2 0.743 - - 0.743 - - - - - -
59. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 0.743 - - 0.743 - - - - - -
60. RP1 ENSDARG00000077687 6 0.743 - - 0.743 - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
61. BX510935.2 BX510935.2 1 0.743 - - 0.743 - - - - - -
62. SIPA1L2 ENSDARG00000061640 2 0.743 - - 0.743 - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
63. si:ch211-262h13.6 si:ch211-262h13.6 0 0.743 - - 0.743 - - - - - -
64. UNC119 UNC119 104 0.743 - - 0.743 - - - - - -
65. si:dkey-250k10.3 si:dkey-250k10.3 2 0.743 - - 0.743 - - - - - -
66. si:ch211-176m18.1 si:ch211-176m18.1 27 0.743 - - 0.743 - - - - - -
67. pcdh2ab6 ENSDARG00000091043 1 0.743 - - 0.743 - - - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
68. zgc:153151 ENSDARG00000069563 126 0.743 - - 0.743 - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
69. BX901889.2 ENSDARG00000078427 0 0.743 - - 0.743 - - - - - -
70. arhgap17a ENSDARG00000020488, ENSDARG00000113457 11 0.743 - - 0.743 - - - - - - Rho GTPase activating protein 17a [Source:ZFIN;Acc:ZDB-GENE-050417-56]
71. CU464131.1 CU464131.1 0 0.743 - - 0.743 - - - - - -
72. got1 ENSDARG00000039093 1 0.743 - - 0.743 - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
73. trim54 ENSDARG00000029907 10 0.743 - - 0.743 - - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
74. ZNF70_3 ZNF70_3 0 0.743 - - 0.743 - - - - - -
75. rasgrf2b ENSDARG00000002816, ENSDARG00000115886 0 0.743 - - 0.743 - - - - - - Ras protein-specific guanine nucleotide-releasing factor 2b [Source:ZFIN;Acc:ZDB-GENE-060504-1]
76. cnga3a ENSDARG00000070726 8 0.743 - - 0.743 - - - - - - cyclic nucleotide gated channel alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090611-2]
77. si:dkey-30k22.8 si:dkey-30k22.8 7 0.743 - - 0.743 - - - - - -
78. SNORD15_1 SNORD15_1 1 0.743 - - 0.743 - - - - - -
79. ETV3L ETV3L 67 0.743 - - 0.743 - - - - - -
80. plp1b ENSDARG00000011929 8 0.743 - - 0.743 - - - - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
81. si:dkey-242e21.4 1 0.743 - - 0.743 - - - - - - si:dkey-242e21.4
82. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 0.743 - - 0.743 - - - - - -
83. gnat2 ENSDARG00000042529 112 0.743 - - 0.743 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
84. zgc:113293 ENSDARG00000038271 0 0.743 - - 0.743 - - - - - - zgc:113293 [Source:ZFIN;Acc:ZDB-GENE-050417-453]
85. pde8b ENSDARG00000063706 1 0.743 - - 0.743 - - - - - - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
86. si:ch211-1e14.1 ENSDARG00000063361, ENSDARG00000114300 0 0.743 - - 0.743 - - - - - - si:ch211-1e14.1 [Source:ZFIN;Acc:ZDB-GENE-050420-149]
87. kcnj1a.6 ENSDARG00000088484 4 0.743 - - 0.743 - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-050420-272]
88. ntm ENSDARG00000018065 1 0.743 - - 0.743 - - - - - - neurotrimin [Source:ZFIN;Acc:ZDB-GENE-060421-6020]
89. CABZ01087025.1 ENSDARG00000117232 10 0.743 - - 0.743 - - - - - -
90. SCARNA6 SCARNA6 258 0.743 - - 0.743 - - - - - -
91. guk1b ENSDARG00000005776 23 0.743 - - 0.743 - - - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
92. FRMPD1_2 FRMPD1_2 2 0.743 - - 0.743 - - - - - -
93. si:ch1073-188e1.1 ENSDARG00000074085 0 0.743 - - 0.743 - - - - - - si:ch1073-188e1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-5]
94. prdm11 ENSDARG00000074468 2 0.743 - - 0.743 - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
95. ENKD1 ENSDARG00000043550 44 0.743 - - 0.743 - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
96. CABZ01055343.4 CABZ01055343.4 9 0.743 - - 0.743 - - - - - -
97. tmx3 5 0.743 - - 0.743 - - - - - - thioredoxin-related transmembrane protein 3
98. MOB2 MOB2 4 0.743 - - 0.743 - - - - - -
99. klf9 ENSDARG00000068194 5 0.743 - - 0.743 - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
100. si:ch211-89f22.1 si:ch211-89f22.1 11 0.743 - - 0.743 - - - - - -

There are 30 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA