Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rtn2b

Gene Name Gene ID Reads Annotation
rtn2b ENSDARG00000057027 1391 reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]










Genes with expression patterns similar to rtn2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rtn2b ENSDARG00000057027 1391 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
2. tnnt2d ENSDARG00000002988 7590 3.905 0.728 - - 0.703 - - 0.955 0.754 0.765 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
3. NRAP ENSDARG00000009341 3565 3.302 - 0.772 - 0.802 - 0.778 0.950 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
4. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.224 0.715 - - 0.837 - - 0.948 0.724 - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
5. prx ENSDARG00000017246 6183 3.209 - 0.785 - 0.733 - - 0.973 - 0.718 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
6. PTPLA PTPLA 4044 3.199 0.795 - - - - - 0.948 0.713 0.743
7. BX294434.1 ENSDARG00000061272 6493 3.19 - 0.760 - 0.732 - - 0.974 - 0.724 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
8. myom1a ENSDARG00000061249 10230 3.185 - - - - - 0.714 0.962 0.788 0.721 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
9. nexn ENSDARG00000057317 10972 3.153 0.739 - - - - 0.726 0.967 - 0.721 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
10. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.131 - 0.710 - - - - 0.920 0.781 0.720 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
11. hhatla ENSDARG00000039051 6598 3.121 - - 0.709 0.744 - - 0.958 - 0.710 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
12. tnnt3a ENSDARG00000030270 112506 3.118 - - - 0.808 - - 0.807 0.733 0.770 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
13. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.114 - 0.790 - 0.783 - 0.777 - - 0.764 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
14. chrna1 ENSDARG00000009021 2931 3.108 0.729 0.713 - 0.709 - - 0.957 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
15. CR392006.1 CR392006.1 1401 3.077 0.703 0.706 - - - 0.785 0.883 - -
16. SYNPO2L SYNPO2L 6697 3.064 - - - 0.775 - 0.741 - 0.798 0.750
17. myoz1b ENSDARG00000071445 13381 3.041 - - 0.704 0.780 - - - 0.780 0.777 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
18. cap2 ENSDARG00000104478 3266 3.025 0.703 - - - - 0.701 0.912 0.709 - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
19. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.981 - 0.744 - 0.787 - - - 0.710 0.740 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
20. ptrfa ptrfa 4363 2.945 0.777 0.712 - 0.716 - 0.740 - - -
21. smyd1a ENSDARG00000009280 1503 2.557 - - - - - 0.848 0.954 0.755 - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
22. zgc:158296 ENSDARG00000070923 3935 2.539 - - - - - 0.826 0.941 - 0.772 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
23. C13H10orf71 3489 2.525 - 0.772 - - - - 0.962 0.791 - chromosome 13 C10orf71 homolog
24. myoz2a ENSDARG00000012311 1373 2.519 - - - 0.764 - 0.796 0.959 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
25. zgc:92113 1738 2.517 - - - - - 0.823 0.972 - 0.722 zgc:92113
26. bag2 ENSDARG00000035005 1402 2.507 - - - - - 0.801 0.913 0.793 - BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
27. ryr3 ENSDARG00000071331 6795 2.506 - 0.727 - - - 0.830 0.949 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
28. murcb murcb 13655 2.499 0.747 - - 0.810 - - 0.942 - -
29. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.495 - - - 0.797 - - 0.932 0.766 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
30. DNAJA4 ENSDARG00000051762 5657 2.474 - - - - - 0.803 0.966 0.705 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
31. smtnl1 ENSDARG00000041257 7410 2.468 0.710 - - - - 0.786 0.972 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
32. MYOM1 MYOM1 3870 2.465 - - - - - - 0.942 0.758 0.765
33. PTGES3L PTGES3L 4801 2.459 0.779 - - - - 0.742 0.938 - -
34. ryr1b ENSDARG00000023797 5693 2.453 - - - - - - 0.951 0.747 0.755 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
35. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.444 - - - - - - 0.968 0.729 0.747 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
36. rp42-pen rp42-pen 3395 2.442 - - - - - 0.773 0.934 - 0.735
37. flncb ENSDARG00000018820 5595 2.435 0.740 - - - - 0.790 0.905 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
38. sptb ENSDARG00000030490 7128 2.43 - 0.737 - - - 0.718 0.975 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
39. stac3 ENSDARG00000098883 1765 2.429 0.772 - - - - 0.744 0.913 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
40. smpx ENSDARG00000045302 2175 2.429 - - - - - 0.792 0.922 - 0.715 small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
41. chrne ENSDARG00000034307, ENSDARG00000112263 1022 2.428 - - - 0.794 - 0.722 0.912 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
42. limch1a ENSDARG00000074275 2981 2.423 0.720 - - - - 0.755 0.948 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
43. MUSTN1 MUSTN1 1882 2.385 - 0.704 - - - 0.725 0.956 - -
44. hsc70 ENSDARG00000012381 961 2.384 - - - - - 0.800 0.862 - 0.722 heat shock cognate 70 [Source:ZFIN;Acc:ZDB-GENE-040426-1221]
45. acsl1 acsl1 4216 2.383 - - - - - 0.780 0.890 - 0.713
46. ppapdc3 ppapdc3 4924 2.377 - - - - - 0.708 0.934 - 0.735
47. cacng1 cacng1 3118 2.374 - 0.705 - - - 0.731 0.938 - -
48. BX324201.1 BX324201.1 3302 2.367 0.739 - - - - - 0.921 - 0.707
49. trim101 ENSDARG00000018264 827 2.366 - - - 0.735 - 0.798 0.833 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
50. mybpc2b ENSDARG00000021265 9618 2.364 - 0.732 - 0.717 - - 0.915 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
51. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.363 0.705 - - 0.746 - - 0.912 - -
52. atp1b3b ENSDARG00000042837 5163 2.352 - - - - - 0.715 0.929 - 0.708 ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
53. cycsb ENSDARG00000044562 40227 2.315 - - - - - 0.730 0.824 0.761 - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
54. fam212aa 1132 2.31 0.746 - - - - 0.755 0.809 - - family with sequence similarity 212, member Aa, transcript variant X1
55. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 2.302 - - - 0.792 - 0.803 - - 0.707 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
56. tpma ENSDARG00000033683 752432 2.292 - - - 0.713 - - 0.827 0.752 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
57. si:ch1073-184j22.2 ENSDARG00000078598 707 2.29 - 0.735 - - - 0.756 0.799 - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
58. SYNPO2 SYNPO2 7382 2.288 - - - - - 0.873 0.713 - 0.702
59. kif21a ENSDARG00000061131 913 2.28 - 0.758 - 0.777 - - 0.745 - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
60. klhl31 ENSDARG00000039066 13656 2.278 - - - - - - 0.811 0.746 0.721 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
61. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 2.265 - - - - - 0.714 0.734 0.817 - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
62. mylz3 ENSDARG00000017441 303597 2.254 - - - 0.794 - - 0.740 0.720 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
63. pgam2 ENSDARG00000057571 23387 2.23 0.701 - - 0.781 - - - 0.748 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
64. ttnb ttnb 73721 2.196 - - 0.712 0.741 - 0.743 - - -
65. bag3 ENSDARG00000039486 1087 2.195 - 0.755 - - - 0.706 0.734 - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
66. atp2a1 ENSDARG00000020574 291561 2.193 - - - 0.706 - - 0.768 0.719 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
67. tnnt3b ENSDARG00000068457 101827 2.167 - 0.736 - 0.710 - - - 0.721 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
68. smyd2b ENSDARG00000005629 8181 2.152 - 0.721 - - - 0.724 - - 0.707 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
69. notum2 ENSDARG00000088411 823 2.149 0.705 0.721 - - - - 0.723 - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
70. ckma ENSDARG00000035327, ENSDARG00000114671 418792 2.144 - - - 0.704 - 0.732 - 0.708 - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
71. txlnbb ENSDARG00000076241 6396 1.803 - - - - - 0.872 0.931 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
72. fitm1 ENSDARG00000056464 1759 1.795 - - - - - 0.871 0.924 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
73. fxr1 ENSDARG00000022968 2831 1.792 - - - - - 0.880 0.912 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
74. ablim2 ENSDARG00000055223 1934 1.776 - - - - - 0.847 0.929 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
75. agla ENSDARG00000103811 2856 1.767 - - - - - 0.839 0.928 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
76. zgc:92518 ENSDARG00000016343 3837 1.758 - - - - - 0.811 0.947 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
77. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.755 0.786 - - - - - 0.969 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
78. jph1a ENSDARG00000058603 2852 1.746 - - - - - 0.804 0.942 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
79. hsp90aa1.1 ENSDARG00000010478 47784 1.746 - - - - - 0.833 0.913 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
80. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.742 - - - - - 0.776 0.966 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
81. alpk2 ENSDARG00000079637 1483 1.74 - - - - - 0.839 0.901 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
82. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.739 - - - - - 0.791 0.948 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
83. obsl1b ENSDARG00000077388 2511 1.73 - - - - - 0.771 0.959 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
84. EHBP1L1 EHBP1L1 2500 1.729 - - - - - - 0.962 0.767 -
85. eef2k ENSDARG00000035835 2906 1.726 - - - 0.799 - - 0.927 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
86. prkg1b ENSDARG00000031702 405 1.724 - - - - - 0.808 0.916 - - protein kinase cGMP-dependent 1b [Source:ZFIN;Acc:ZDB-GENE-080225-40]
87. sh3bgr ENSDARG00000021633 3498 1.723 - - - - - 0.745 0.978 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
88. klhl40a ENSDARG00000039052 2537 1.722 - - - - - 0.788 0.934 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
89. myhc4 ENSDARG00000035438 1322 1.721 - - - - - 0.791 0.930 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
90. synpo2lb ENSDARG00000078696 2361 1.72 - - - - - 0.842 0.878 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
91. mafa ENSDARG00000015890 2140 1.719 - - - - - 0.816 0.903 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
92. alpk3a ENSDARG00000078989 1992 1.718 - - - - - 0.777 0.941 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
93. CABZ01097761.1 ENSDARG00000116119 445 1.714 - - - - - 0.846 0.868 - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
94. chrnd ENSDARG00000019342 2728 1.713 - - - - - - 0.971 - 0.742 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
95. anxa6 ENSDARG00000013335 3588 1.709 - - - - - 0.804 0.905 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
96. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.708 - - - - - 0.801 0.907 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
97. mdh1b ENSDARG00000018008 3196 1.705 - - - - - - 0.952 - 0.753 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
98. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.7 - - - - - 0.787 0.913 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
99. TRIM63 TRIM63 1600 1.7 - - - - - 0.761 0.939 - -
100. tnw 16679 1.697 - 0.734 - - - - 0.963 - - tenascin W, transcript variant X2

There are 1293 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA