Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rtn1a

Gene Name Gene ID Reads Annotation
rtn1a ENSDARG00000006497 19339 reticulon 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2426]










Genes with expression patterns similar to rtn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rtn1a ENSDARG00000006497 19339 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 reticulon 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2426]
2. slc2a2 ENSDARG00000056196 2061 3.207 0.807 - 0.774 0.847 0.779 - - - - solute carrier family 2 (facilitated glucose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1213]
3. CFI 3801 3.158 0.717 - 0.796 0.812 0.833 - - - - complement factor I
4. CD68 CD68 4599 3.068 0.782 - 0.749 0.805 0.732 - - - -
5. fgb ENSDARG00000008969 11737 3.024 0.744 - 0.761 0.801 0.718 - - - - fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
6. c3a c3a 6690 2.561 - - 0.826 0.875 0.860 - - - -
7. gart ENSDARG00000101089 6062 2.535 0.835 - 0.845 0.855 - - - - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
8. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 2.493 - - 0.794 - 0.732 - - - 0.967 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
9. pvalb9 ENSDARG00000071601, ENSDARG00000113946 30137 2.476 - - 0.800 0.854 0.822 - - - - parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
10. MPC2 ENSDARG00000024478 4194 2.452 0.870 - - 0.760 0.822 - - - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
11. TMEM254 ENSDARG00000109902 3377 2.447 - - 0.702 0.787 - - - - 0.958 transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
12. zgc:136410 ENSDARG00000102241 8433 2.434 - - 0.760 0.850 0.824 - - - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
13. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 2.424 - - 0.802 0.835 0.787 - - - - solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
14. plg ENSDARG00000023111 2429 2.405 - - 0.823 0.784 0.798 - - - - plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
15. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 2.39 0.771 - - 0.776 0.843 - - - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
16. pla2g12b ENSDARG00000015662 27239 2.365 - - 0.773 0.850 0.742 - - - - phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
17. nt5c3a ENSDARG00000058597 14299 2.354 - - 0.783 0.727 0.844 - - - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
18. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 2.351 0.777 - 0.807 - 0.767 - - - - fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
19. zgc:161979_1 zgc:161979_1 206500 2.341 0.798 - - 0.774 0.769 - - - -
20. ctsba ENSDARG00000055120 18732 2.322 - - 0.779 0.812 0.731 - - - - cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
21. tkt tkt 7203 2.318 - - 0.830 0.786 0.702 - - - -
22. apoa1b ENSDARG00000101324 336817 2.317 - - 0.780 0.726 0.811 - - - - apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
23. ucp2 ENSDARG00000043154 2921 2.305 0.730 - 0.758 0.817 - - - - - uncoupling protein 2 [Source:ZFIN;Acc:ZDB-GENE-990708-8]
24. rbp1a rbp1a 9847 2.302 0.851 - - 0.750 0.701 - - - -
25. dmgdh ENSDARG00000025703 6088 2.289 - - 0.770 0.815 0.704 - - - - dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
26. apoc2 ENSDARG00000092155 38149 2.282 0.723 - 0.762 - 0.797 - - - - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
27. CABZ01045212.1 ENSDARG00000087525 1460 2.274 0.819 - 0.727 0.728 - - - - - major facilitator superfamily domain-containing protein 8-like [Source:NCBI gene;Acc:564731]
28. dao.1 ENSDARG00000035602 11969 2.261 0.718 - 0.781 0.762 - - - - - D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
29. tex2 ENSDARG00000078186 2467 2.257 - - 0.716 0.831 0.710 - - - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
30. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 2.252 - - 0.707 0.843 0.702 - - - - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
31. nr0b2a ENSDARG00000044685 2508 2.25 - - 0.779 0.768 0.703 - - - - nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
32. ambp ENSDARG00000004296, ENSDARG00000112731 1305 2.25 0.753 - - - 0.733 0.764 - - - alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
33. apobb apobb 258472 2.248 - - 0.708 0.777 0.763 - - - -
34. atic ENSDARG00000016706 6032 2.235 0.746 - 0.753 0.736 - - - - - 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-011212-4]
35. cask cask 3384 2.23 0.709 - 0.735 0.786 - - - - -
36. CLEC4A CLEC4A 1016 2.224 - - 0.727 0.747 0.750 - - - -
37. mthfd1b ENSDARG00000040492 3784 2.219 - - 0.730 0.728 0.761 - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
38. si:dkey-126g1.9 ENSDARG00000093702 7832 2.204 - - 0.716 0.747 0.741 - - - - si:dkey-126g1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-9862]
39. f2 ENSDARG00000036041 3129 2.199 - - 0.753 0.713 0.733 - - - - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
40. cdc25 cdc25 3913 1.729 - 0.767 - - - - - - 0.962
41. rps17 ENSDARG00000104011 27028 1.7 - - - - - 0.801 - - 0.899 ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
42. serpina1l ENSDARG00000090850 10625 1.67 - - 0.823 0.847 - - - - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
43. atp1b3a ENSDARG00000015790 12310 1.668 - - - - 0.730 - - - 0.938 ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
44. PLCXD1_4 PLCXD1_4 3673 1.666 0.846 - - 0.820 - - - - -
45. tfa ENSDARG00000016771 30517 1.662 - - 0.810 0.852 - - - - - transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
46. rpia ENSDARG00000056640, ENSDARG00000110576 8288 1.654 - - 0.852 - 0.802 - - - - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
47. abca1b ENSDARG00000079009 14119 1.653 - - 0.833 0.820 - - - - - ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
48. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 1.651 - - - 0.821 - 0.830 - - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
49. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 1.648 - - 0.839 0.809 - - - - - acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
50. adssl1 ENSDARG00000099517 7518 1.633 - - 0.812 0.821 - - - - - adenylosuccinate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-040516-18]
51. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 1.628 0.830 - - 0.798 - - - - - regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
52. hao1 ENSDARG00000024160 6104 1.626 - - - 0.828 0.798 - - - - hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
53. atp2a3 ENSDARG00000060978 1408 1.619 0.756 - - - - 0.863 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
54. cfh ENSDARG00000100442, ENSDARG00000109660 2043 1.617 - - - 0.822 0.795 - - - - complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]
55. psap ENSDARG00000013968 22919 1.616 - - 0.769 0.847 - - - - - prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
56. cyp2aa4 ENSDARG00000098803 1762 1.615 0.893 - - 0.722 - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
57. cfb ENSDARG00000055278, ENSDARG00000110358 1725 1.612 - - - 0.788 0.824 - - - - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
58. ide ENSDARG00000075570 4331 1.603 0.733 - - - - 0.870 - - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
59. pgm1 ENSDARG00000013561 11984 1.599 - - - 0.733 0.866 - - - - phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
60. abat ENSDARG00000006031 2143 1.597 0.729 - - - - 0.868 - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
61. kdelr2a ENSDARG00000005254 13871 1.595 0.851 - - - - 0.744 - - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
62. APOB APOB 33858 1.595 - - - 0.820 0.775 - - - -
63. fahd2a ENSDARG00000103759 9581 1.594 - - 0.769 - 0.825 - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
64. prps1a ENSDARG00000015524 23738 1.593 - - 0.786 - 0.807 - - - - phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
65. rcan2 ENSDARG00000021869 874 1.593 - - - 0.730 - 0.863 - - - regulator of calcineurin 2 [Source:ZFIN;Acc:ZDB-GENE-040516-17]
66. amotl2a ENSDARG00000061923 4713 1.592 - 0.749 - - - 0.843 - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
67. TMEM179 ENSDARG00000013292 3452 1.588 0.785 - - 0.803 - - - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
68. aldob ENSDARG00000053684 30498 1.586 - - 0.795 0.791 - - - - - aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
69. fgg ENSDARG00000037281, ENSDARG00000114705 10817 1.585 - - - 0.736 0.849 - - - - fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
70. cry3_1 cry3_1 3347 1.583 0.849 - - 0.734 - - - - -
71. suclg2 ENSDARG00000044914 7950 1.578 - - 0.802 - 0.776 - - - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
72. zgc:158374 zgc:158374 2227 1.575 - - 0.728 0.847 - - - - -
73. sh3yl1 ENSDARG00000074393 815 1.575 0.706 - - - - 0.869 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
74. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 1.574 - - - 0.819 0.755 - - - - carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
75. lgals2b ENSDARG00000038153 2196 1.574 - - 0.743 0.831 - - - - - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
76. dap ENSDARG00000000069, ENSDARG00000114419 13155 1.572 0.762 - - 0.810 - - - - - death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
77. serpina1 ENSDARG00000090286 8108 1.572 - - 0.843 - 0.729 - - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
78. rhbg ENSDARG00000009018 1131 1.567 - - 0.704 0.863 - - - - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
79. CNDP1 CNDP1 6456 1.567 - - 0.825 - 0.742 - - - -
80. plbd1 ENSDARG00000063313 2842 1.556 - - 0.825 0.731 - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
81. ctsd ENSDARG00000057698, ENSDARG00000110172, ENSDARG00000113876 14357 1.556 - - 0.806 - 0.750 - - - - cathepsin D [Source:ZFIN;Acc:ZDB-GENE-010131-8]
82. serp1 ENSDARG00000099439 23682 1.556 0.765 - - - - - - - 0.791 stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
83. tspan13a ENSDARG00000068883 678 1.547 0.792 - - 0.755 - - - - - tetraspanin 13a [Source:ZFIN;Acc:ZDB-GENE-040718-19]
84. si:dkey-69o16.5 ENSDARG00000070057 3628 1.546 - - - 0.783 0.763 - - - - si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
85. slc25a25a ENSDARG00000010572 1240 1.545 - - 0.772 0.773 - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a [Source:ZFIN;Acc:ZDB-GENE-040426-2396]
86. vtnb ENSDARG00000053831 2364 1.542 - - 0.734 0.808 - - - - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
87. lrrc58a ENSDARG00000076773 1269 1.542 - - 0.748 0.794 - - - - - leucine rich repeat containing 58a [Source:ZFIN;Acc:ZDB-GENE-090312-76]
88. sid4 sid4 1358 1.54 - - 0.743 0.797 - - - - -
89. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 1.539 0.820 - - 0.719 - - - - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
90. itih2 ENSDARG00000045516 1893 1.533 - - 0.708 - 0.825 - - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
91. ENSDARG00000086641 ENSDARG00000086641 1819 1.525 0.772 - - 0.753 - - - - -
92. znrf2a ENSDARG00000077855 1845 1.524 - - 0.706 0.818 - - - - - zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
93. CPN2 CPN2 682 1.524 0.793 - - 0.731 - - - - -
94. si:dkeyp-1h4.6 ENSDARG00000093936 841 1.522 - - 0.781 - 0.741 - - - - si:dkeyp-1h4.6 [Source:ZFIN;Acc:ZDB-GENE-060503-841]
95. tmem63ba ENSDARG00000104559 11859 1.522 0.798 - - 0.724 - - - - - transmembrane protein 63Ba [Source:ZFIN;Acc:ZDB-GENE-030131-4320]
96. c9 ENSDARG00000016319 3917 1.52 - - 0.755 0.765 - - - - - complement component 9 [Source:ZFIN;Acc:ZDB-GENE-050522-442]
97. SLC22A23 ENSDARG00000078856 2921 1.519 - - 0.750 0.769 - - - - - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
98. si:dkey-238o13.4 ENSDARG00000078847 884 1.514 0.792 - - 0.722 - - - - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
99. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 1.514 - - 0.741 0.773 - - - - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
100. fabp1b.1 ENSDARG00000059227 5670 1.512 - - 0.743 0.769 - - - - - fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]

There are 859 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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