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Results for rtfdc1

Gene Name Gene ID Reads Annotation
rtfdc1 1792 replication termination factor 2 domain containing 1, transcript variant X2










Genes with expression patterns similar to rtfdc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rtfdc1 1792 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication termination factor 2 domain containing 1, transcript variant X2
2. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 2.479 - 0.718 - - 0.930 0.831 - - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
3. polb ENSDARG00000003749 2049 2.468 - 0.740 - - 0.950 0.778 - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
4. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 2.423 - 0.781 - 0.726 0.916 - - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
5. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.816 - - - - 0.964 0.852 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
6. tnks tnks 1695 1.784 - - - - 0.956 0.828 - - -
7. dusp11 ENSDARG00000038156 2490 1.782 - 0.812 - - 0.970 - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
8. arfrp1 ENSDARG00000057857 2840 1.78 - 0.844 - - 0.936 - - - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
9. fkbp7 ENSDARG00000010962 2986 1.772 - 0.841 - - 0.931 - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
10. med23 ENSDARG00000029157 4453 1.772 - - - - 0.971 - 0.801 - - mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
11. sap30l ENSDARG00000030213 5795 1.764 - 0.830 - - 0.934 - - - - sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
12. ide ENSDARG00000075570 4331 1.764 - 0.833 - - 0.931 - - - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
13. aldh18a1 ENSDARG00000099579 2185 1.762 - 0.802 - - 0.960 - - - - aldehyde dehydrogenase 18 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-5602]
14. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.757 - 0.794 - - 0.963 - - - -
15. hoxc4a ENSDARG00000070338 1382 1.752 - - - - 0.962 0.790 - - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
16. pdcd2l ENSDARG00000002754 417 1.74 - - - - 0.975 0.765 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
17. dnajc1 ENSDARG00000001940 2848 1.737 - 0.807 - - 0.930 - - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
18. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 1.736 - - - - 0.977 0.759 - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
19. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.734 - - - - 0.872 0.862 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
20. sh3bp5lb 1090 1.731 - - - - 0.978 0.753 - - - SH3-binding domain protein 5-like, b
21. sirt2 ENSDARG00000011488 5389 1.726 - 0.773 - - 0.953 - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
22. zcchc17 ENSDARG00000018936 1577 1.724 - 0.750 - - 0.974 - - - - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
23. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.717 - - - - 0.928 0.789 - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
24. si:ch211-282k23.2 ENSDARG00000093591 447 1.714 - - - - 0.977 0.737 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
25. gon4l ENSDARG00000005867 982 1.712 - - - - 0.979 0.733 - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
26. usf2 ENSDARG00000020228 2667 1.71 - - - - 0.978 - 0.732 - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
27. flrt3 ENSDARG00000076895 3516 1.696 - - - - 0.833 0.863 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
28. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.691 - - - - 0.966 - 0.725 - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
29. tmem176l.1 ENSDARG00000099491 860 1.687 - - - - 0.973 - 0.714 - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
30. scrt2 ENSDARG00000056175 4331 1.667 - - - - 0.933 0.734 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
31. fibpa ENSDARG00000016058 2148 1.666 - - - - 0.951 - 0.715 - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
32. tdg tdg 3269 1.665 - - - - 0.943 0.722 - - -
33. coil ENSDARG00000040070 863 1.656 - - - - 0.879 0.777 - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
34. ginm1 ENSDARG00000021975 1393 1.643 - 0.858 - - - 0.785 - - - glycoprotein integral membrane 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5900]
35. ndufa10 ENSDARG00000013333 6597 1.633 - 0.775 - - 0.858 - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
36. npm1b ENSDARG00000037675 5448 1.629 - - - - 0.814 0.815 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
37. tnni2a.2 ENSDARG00000005841 483 1.628 - - - - - 0.802 0.826 - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
38. commd3 ENSDARG00000045402 1601 1.626 - 0.761 - - - 0.865 - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
39. rangap1a ENSDARG00000041317 1456 1.625 - 0.835 - - - 0.790 - - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
40. zgc:77262 ENSDARG00000044545 5563 1.619 - - - - 0.893 - 0.726 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
41. src ENSDARG00000008107 3643 1.591 - 0.725 - - 0.866 - - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
42. mkrn4 ENSDARG00000028295 2768 1.59 - 0.762 - - - 0.828 - - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
43. zfand5b ENSDARG00000002271 4145 1.589 - - - - 0.841 0.748 - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
44. C1H10orf12 C1H10orf12 1663 1.587 - - - - - 0.843 0.744 - -
45. ppp4r2a ENSDARG00000026540 1782 1.587 - - - - - 0.832 0.755 - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
46. srpk1b ENSDARG00000031560 2079 1.584 - - - - - 0.865 0.719 - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
47. ptbp2b ENSDARG00000015901 2458 1.572 - 0.728 - - - 0.844 - - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
48. tmem165 ENSDARG00000034600 1174 1.561 - 0.785 - - - 0.776 - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
49. capn7 ENSDARG00000102987 386 1.555 - 0.736 - - - - 0.819 - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
50. fscn1a ENSDARG00000059680 3999 1.544 - 0.727 - - - 0.817 - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
51. chek1 ENSDARG00000104765 1029 1.539 - 0.774 - - - - 0.765 - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
52. babam1 ENSDARG00000077526 776 1.538 - 0.755 - - - 0.783 - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
53. ube2d2l ENSDARG00000099749 1462 1.537 - 0.714 - - - 0.823 - - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
54. CR936200.1 CR936200.1 327 1.531 - - - 0.714 - 0.817 - - -
55. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.524 - - - - - 0.760 0.764 - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
56. arhgap11a ENSDARG00000100019 1642 1.523 - - - - - 0.753 - 0.770 - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
57. tmem8a ENSDARG00000032795 677 1.52 - 0.773 - - - 0.747 - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
58. xpnpep3 ENSDARG00000007916 166 1.511 - - - - - 0.782 0.729 - - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
59. BX511021.3 ENSDARG00000117414 592 1.508 - - - - - 0.762 0.746 - -
60. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.507 - 0.784 - - - 0.723 - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
61. gne ENSDARG00000099771 617 1.504 - - - - - 0.710 0.794 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
62. zgc:56064 1275 1.501 - 0.787 0.714 - - - - - - zgc:56064, transcript variant X1
63. fancd2 ENSDARG00000053574 247 1.499 - 0.711 - - - 0.788 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
64. rnf150a ENSDARG00000024827 1903 1.496 - 0.757 - - - - 0.739 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
65. BX539313.1 ENSDARG00000097396 1277 1.492 - 0.768 - - - - - 0.724 -
66. smfn ENSDARG00000009806 1280 1.491 - 0.787 - - - 0.704 - - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
67. sas sas 1783 1.488 - 0.772 - - - 0.716 - - -
68. ttc7b ENSDARG00000061207 710 1.484 - 0.724 - - - 0.760 - - - tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]
69. tial1 ENSDARG00000009525 1856 1.478 - 0.769 - - - 0.709 - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
70. CU633849.1 CU633849.1 590 1.477 - 0.749 - - - 0.728 - - -
71. ccdc85b ENSDARG00000061543 1309 1.467 - - - - - 0.717 0.750 - - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
72. camlg ENSDARG00000100409 2157 1.466 - - - - - 0.703 0.763 - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
73. bola1 ENSDARG00000039915 658 1.464 - 0.737 - - - 0.727 - - - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
74. dennd2da ENSDARG00000058666 1780 1.454 - 0.735 0.719 - - - - - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
75. kdm4b ENSDARG00000099675 2037 1.452 - 0.721 - - - 0.731 - - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
76. LDLRAD4 LDLRAD4 1237 1.451 - - - - - 0.707 0.744 - -
77. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.448 0.726 - - - - - 0.722 - - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
78. emc1 ENSDARG00000057255 3582 1.439 - 0.715 - - - - 0.724 - - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
79. setdb1b ENSDARG00000099021 2937 1.439 - 0.702 - - - - - 0.737 - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
80. hmgb1b ENSDARG00000030479 10398 1.438 - 0.733 - - 0.705 - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
81. tspan2 tspan2 948 1.436 - 0.732 - - - 0.704 - - -
82. ssbp3b ENSDARG00000030155 7163 1.428 - - - - - 0.726 0.702 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
83. klf7a ENSDARG00000073857 1226 1.414 - - - - - 0.707 0.707 - - Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
84. kmt2a ENSDARG00000004537 2169 1.413 - - - - - 0.711 - 0.702 - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
85. pinx1 ENSDARG00000023532 4452 1.412 - 0.701 - - - 0.711 - - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
86. utp3 ENSDARG00000056720 922 0.984 - - - - 0.984 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
87. gpr161 ENSDARG00000055659 454 0.983 - - - - 0.983 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
88. CASKIN2_1 CASKIN2_1 2299 0.983 - - - - 0.983 - - - -
89. rybpa ENSDARG00000037773 904 0.982 - - - - 0.982 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
90. cnpy1 ENSDARG00000003757 1132 0.982 - - - - 0.982 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
91. ctnnd2b ENSDARG00000003779 964 0.981 - - - - 0.981 - - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
92. wfikkn2a ENSDARG00000013460 859 0.981 - - - - 0.981 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
93. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.981 - - - - 0.981 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
94. nol8 ENSDARG00000044143 425 0.98 - - - - 0.980 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
95. slc38a4 ENSDARG00000018149 2344 0.98 - - - - 0.980 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
96. mbd1 mbd1 1309 0.98 - - - - 0.980 - - - -
97. Mar-01 Mar-01 176 0.98 - - - - 0.980 - - - -
98. aatkb ENSDARG00000104442 392 0.98 - - - - 0.980 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
99. gsto2 ENSDARG00000033285 583 0.98 - - - - 0.980 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
100. ccnb1 ENSDARG00000051923 3226 0.98 - - - - 0.980 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]

There are 1765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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