Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rtcb

Gene Name Gene ID Reads Annotation
rtcb ENSDARG00000101047 496 RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2096]










Genes with expression patterns similar to rtcb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rtcb ENSDARG00000101047 496 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2096]
2. mettl10 131 1.636 - - - - - - 0.762 - 0.874 methyltransferase like 10, transcript variant X1
3. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1.595 - - - - - - 0.758 0.837 - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
4. dhrs13a.1 ENSDARG00000026322 336 1.593 - - - - - - - 0.771 0.822 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-58]
5. ESAM ESAM 123 1.566 - - - - - - 0.757 0.809 -
6. tank ENSDARG00000067723 225 1.562 - - - - - - - 0.795 0.767 TRAF family member-associated NFKB activator [Source:ZFIN;Acc:ZDB-GENE-060929-308]
7. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 1.541 - - - - - - 0.718 0.823 - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
8. glod4 ENSDARG00000042509, ENSDARG00000113811 297 1.526 0.797 - - - - - 0.729 - - glyoxalase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040912-38]
9. gpr161 ENSDARG00000055659 454 1.508 - - - - - - 0.806 0.702 - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
10. gxylt1b ENSDARG00000022550 160 1.499 - 0.772 - - - - - 0.727 - glucoside xylosyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041210-116]
11. C5H2orf68 C5H2orf68 849 1.493 0.705 - - - - - - 0.788 -
12. si:ch211-110p13.3 si:ch211-110p13.3 197 1.493 - - - - - - 0.715 0.778 -
13. MKL1 MKL1 368 1.491 - - - - - 0.778 0.713 - -
14. C8H22orf39 C8H22orf39 1236 1.49 - - - - - - 0.701 0.789 -
15. hsd17b10 ENSDARG00000017781 1793 1.483 - 0.778 - - - - 0.705 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
16. CCDC114 ENSDARG00000015010 190 1.476 - 0.705 - - - - 0.771 - - coiled-coil domain containing 114 [Source:ZFIN;Acc:ZDB-GENE-041114-110]
17. pigu ENSDARG00000075530 348 1.474 - - - - - - 0.771 0.703 - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
18. gatad1 ENSDARG00000027612 1824 1.469 - 0.709 - - - - 0.760 - - GATA zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050629-1]
19. RUNDC3A RUNDC3A 204 1.454 - 0.702 - - - - - - 0.752
20. fgf4 ENSDARG00000105230 407 1.415 0.711 0.704 - - - - - - - fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]
21. has2 ENSDARG00000036987 349 1.414 - 0.703 - - - - - 0.711 - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
22. si:dkey-4c15.12 ENSDARG00000095350 119 0.911 - - - - - - - 0.911 - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
23. prcp ENSDARG00000037883 473 0.897 - - - 0.897 - - - - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
24. heatr3 ENSDARG00000036076 944 0.894 - - - - - - 0.894 - - HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]
25. slc12a2 ENSDARG00000104573 59 0.894 - - - - - - - 0.894 - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
26. arhgap15 ENSDARG00000062349 28 0.887 - - - - - - - 0.887 - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
27. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 0.884 - - - 0.884 - - - - - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
28. WIZ WIZ 1188 0.884 - - - - - - 0.884 - -
29. C13H20orf194 C13H20orf194 580 0.883 - - - - - - 0.883 - -
30. si:ch1073-263o8.2 ENSDARG00000090870 66 0.881 - - - - - - - 0.881 - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
31. rit1 ENSDARG00000069150 520 0.879 - - - - - - 0.879 - - Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
32. mtmr2 ENSDARG00000004616 1052 0.876 - - - - - - - 0.876 - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
33. TNS3 TNS3 1286 0.876 - - - 0.876 - - - - -
34. rdh8a ENSDARG00000028048 334 0.874 - - - - - - - - 0.874 retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
35. ctns ENSDARG00000008890 887 0.872 - - - 0.872 - - - - - cystinosin, lysosomal cystine transporter [Source:ZFIN;Acc:ZDB-GENE-050522-352]
36. si:dkey-270e21.7 si:dkey-270e21.7 155 0.872 - - - 0.872 - - - - -
37. erfl3 ENSDARG00000062801 149 0.872 - - - - - - - 0.872 - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
38. LPIN3 LPIN3 121 0.871 - - - - - - - 0.871 -
39. CABZ01080457.1 CABZ01080457.1 445 0.867 - - - - - - - - 0.867
40. nol11 ENSDARG00000026767 2528 0.867 - - - - - - 0.867 - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
41. foxc1a ENSDARG00000091481 1059 0.866 - - - - - - 0.866 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
42. ABHD17A ABHD17A 453 0.866 - 0.866 - - - - - - -
43. tesca ENSDARG00000028346 614 0.866 - - - - - - - 0.866 - tescalcin a [Source:ZFIN;Acc:ZDB-GENE-040426-2632]
44. efcab7 ENSDARG00000020279 1030 0.866 - - - - - - - 0.866 - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
45. ormdl2 ENSDARG00000058022 1146 0.865 - - - 0.865 - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
46. CR385054.1_1 ENSDARG00000100106 43 0.865 - - - - - - - 0.865 -
47. ficd ENSDARG00000035595 129 0.863 - - - - - - - 0.863 - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
48. RDM1 RDM1 28 0.862 - - - - - - - 0.862 -
49. rabl5 rabl5 245 0.86 - - - - - - 0.860 - -
50. malt1b malt1b 244 0.859 - - - - - - - 0.859 -
51. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.857 - - - - - - - 0.857 - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
52. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 0.857 - - - 0.857 - - - - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
53. cerkl ENSDARG00000079397 218 0.856 - - - - - - 0.856 - - ceramide kinase-like [Source:ZFIN;Acc:ZDB-GENE-070410-38]
54. glrx5 ENSDARG00000043665 2687 0.855 - - - - - 0.855 - - - glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
55. CU633477.1 CU633477.1 19 0.854 - - - - - - - 0.854 -
56. cbln4 ENSDARG00000061240 67 0.853 - - - - - - - 0.853 - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
57. odf3l2 36 0.853 - - - - - - - 0.853 - outer dense fiber of sperm tails 3-like 2
58. si:dkey-202b22.6 ENSDARG00000045552 190 0.853 - - - - - - 0.853 - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
59. pex10 ENSDARG00000041511 52 0.851 - - - - - - - 0.851 - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
60. ofd1 ENSDARG00000000529 203 0.85 - - - - - - - 0.850 - oral-facial-digital syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5427]
61. nhej1 ENSDARG00000058893 172 0.85 - - - - - - - 0.850 - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
62. MYH9 MYH9 158 0.849 - - - - - - - 0.849 -
63. si:dkey-178e17.3 ENSDARG00000058658 271 0.849 - - - - - - - 0.849 - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
64. bon bon 20 0.849 - - - - - - - 0.849 -
65. mettl5 ENSDARG00000068893 159 0.849 - - - - - - - - 0.849 methyltransferase like 5 [Source:ZFIN;Acc:ZDB-GENE-041010-21]
66. SLC35A3_1 SLC35A3_1 35 0.849 - - - - - - - 0.849 -
67. si:dkey-152b24.7 ENSDARG00000099715 26 0.847 - - - - - - - 0.847 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
68. pvrl3l pvrl3l 943 0.847 - 0.847 - - - - - - -
69. CABZ01078944.1 CABZ01078944.1 9 0.847 - - - - - - - 0.847 -
70. si:dkey-167k11.1 si:dkey-167k11.1 14 0.847 - - - - - - - 0.847 -
71. CU855931.2 CU855931.2 13 0.847 - - - - - - - 0.847 -
72. emc4 ENSDARG00000039268 553 0.847 - - - - - - - 0.847 - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
73. si:dkey-148f24.5 si:dkey-148f24.5 7 0.847 - - - - - - - 0.847 -
74. stk36 ENSDARG00000061095 113 0.846 - - - - - - - 0.846 - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
75. hrasb ENSDARG00000005651 662 0.845 - - - - - - - 0.845 - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
76. LRRC8A LRRC8A 406 0.845 - - - - - - 0.845 - -
77. si:ch73-222h13.1 ENSDARG00000087107 16 0.845 - - - - - - - 0.845 - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]
78. man2a1 ENSDARG00000102200 12 0.845 - - - - - - - 0.845 - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
79. si:ch211-179l5.5 si:ch211-179l5.5 249 0.844 - 0.844 - - - - - - -
80. PEG3_4 PEG3_4 256 0.844 - - - - - - - 0.844 -
81. bik ENSDARG00000045549 18 0.843 - - - - - - - 0.843 - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
82. apnl ENSDARG00000090900 21 0.843 - - - - - - - 0.843 - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
83. FAM124B ENSDARG00000087489 16 0.843 - - - - - - - 0.843 - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
84. slc2a6 ENSDARG00000058731 103 0.843 - - - - - - - 0.843 - solute carrier family 2 (facilitated glucose transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-081104-301]
85. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 0.843 - - - - - - - - 0.843 potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
86. eapp ENSDARG00000017272 404 0.842 - - - 0.842 - - - - - e2f-associated phosphoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-5529]
87. zgc:66443 ENSDARG00000057707 624 0.842 - - - - - - - - 0.842 zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
88. si:dkey-4j21.1 17 0.842 - - - - - - - 0.842 - si:dkey-4j21.1, transcript variant X2
89. zgc:113162 ENSDARG00000052923 62 0.841 - - - - - - - 0.841 - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
90. chmp6b ENSDARG00000102024 37 0.84 - - - - - - - 0.840 - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
91. l3mbtl1b ENSDARG00000074346 120 0.84 - - - - - - - 0.840 - l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
92. CR339041.2 ENSDARG00000051711 18 0.84 - - - - - - - 0.840 -
93. pde10a ENSDARG00000003449 60 0.84 - - - - - - - 0.840 - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
94. BX547934.1 ENSDARG00000097061 35 0.84 - - - - - - - 0.840 -
95. RBM20 74 0.84 - - - - - - - 0.840 - RNA binding motif protein 20, transcript variant X1
96. CABZ01113191.1 CABZ01113191.1 388 0.84 - - - 0.840 - - - - -
97. smcr7a smcr7a 1356 0.839 - - - - - - - - 0.839
98. si:ch211-101n13.1 si:ch211-101n13.1 68 0.837 - - - - - - - 0.837 -
99. cib1 ENSDARG00000103118 291 0.837 - - - - - - - - 0.837 calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
100. ddx54 ENSDARG00000105286 183 0.836 - 0.836 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]

There are 757 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA