Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rspo1

Gene Name Gene ID Reads Annotation
rspo1 ENSDARG00000104340, ENSDARG00000111655 13 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]










Genes with expression patterns similar to rspo1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
2. si:ch211-10j20.7 si:ch211-10j20.7 8 2 - 1.000 - - - - 1.000 - -
3. bdkrb1 ENSDARG00000020744 4 2 - - 1.000 - - - 1.000 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
4. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 2 1.000 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
5. pxn pxn 10 2 - - 1.000 - - - 1.000 - -
6. irgq2 ENSDARG00000068657 4 2 1.000 - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
7. CU695076.1 CU695076.1 7 2 1.000 1.000 - - - - - - -
8. zp2.5 ENSDARG00000086522 15 2 1.000 - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
9. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 - 1.000 - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
10. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
11. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 2 1.000 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
12. arl8 ENSDARG00000094709 6 2 1.000 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
13. si:ch211-234c11.3_1 ENSDARG00000093615 10 2 1.000 - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
14. SEMA6B SEMA6B 35 2 - 1.000 - - - - 1.000 - -
15. tbx5b ENSDARG00000092060 37 2 1.000 - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
16. FP565458.1 FP565458.1 61 1.975 1.000 0.975 - - - - - - -
17. CR847504.1 ENSDARG00000102515 29 1.958 - 1.000 - - - - 0.958 - -
18. si:ch211-255a21.4 si:ch211-255a21.4 26 1.941 - 1.000 0.941 - - - - - -
19. kcnip3a ENSDARG00000034229 63 1.933 - 1.000 - - - - 0.933 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
20. cx55.5 13 1.93 - - 0.930 - - - 1.000 - - connexin 55.5, transcript variant X1
21. panx3 ENSDARG00000004627 7 1.93 - 1.000 - - 0.930 - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
22. TMEM260 ENSDARG00000076362 63 1.863 1.000 - - - - - 0.863 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
23. sod3b ENSDARG00000079183 39 1.863 1.000 - - - - - 0.863 - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
24. si:dkey-58f10.9 si:dkey-58f10.9 86 1.859 0.942 0.917 - - - - - - -
25. SERINC3 SERINC3 21 1.856 0.856 1.000 - - - - - - -
26. FAM177B 9 1.85 - - - - 0.850 - 1.000 - - family with sequence similarity 177 member B
27. cyp4f3 ENSDARG00000053530 10 1.847 1.000 - - - 0.847 - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
28. si:dkey-187i8.2 ENSDARG00000096624 8 1.847 - 1.000 - - 0.847 - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
29. GMEB2 ENSDARG00000093240 6 1.843 1.000 - - 0.843 - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
30. SLC7A8 SLC7A8 25 1.834 - 1.000 0.834 - - - - - -
31. BX088525.2 ENSDARG00000117222 11 1.822 1.000 0.822 - - - - - - -
32. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1.802 1.000 0.802 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
33. CR391977.3 CR391977.3 76 1.796 - - 0.857 - - - 0.939 - -
34. WNK3 WNK3 36 1.794 - 1.000 - - - - 0.794 - -
35. si:ch211-194e1.8 si:ch211-194e1.8 14 1.777 1.000 - - 0.777 - - - - -
36. tyro3 ENSDARG00000005356 4 1.771 - 1.000 - - - - - - 0.771 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
37. si:ch211-232k18.2 si:ch211-232k18.2 2 1.771 - 1.000 - - - - - - 0.771
38. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.771 - 1.000 - - - - - - 0.771 purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
39. GRINA GRINA 12 1.771 - - - - - - 1.000 - 0.771
40. CR854891.1 CR854891.1 7 1.751 - - - - 0.751 - 1.000 - -
41. BX511189.1 BX511189.1 34 1.746 0.746 1.000 - - - - - - -
42. npffr1l3 ENSDARG00000010712 18 1.731 - 0.731 - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
43. c1qtnf2 ENSDARG00000059944 3 1.719 - - 1.000 - - - - - 0.719 C1q and TNF related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5133]
44. si:dkey-148e22.3 si:dkey-148e22.3 4 1.719 - - - - - - 1.000 - 0.719
45. rtn4rl2a ENSDARG00000052012 5 1.716 - 1.000 - - - - - - 0.716 reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
46. HEATR5B ENSDARG00000059116 3 1.716 - - - 0.777 - - 0.939 - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
47. cx45.6 cx45.6 26 1.713 1.000 0.713 - - - - - - -
48. ovca2 ENSDARG00000103748 38 1.709 1.000 0.709 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
49. CABZ01080142.1 CABZ01080142.1 52 1.649 0.886 0.763 - - - - - - -
50. helt ENSDARG00000056400 482 1.613 - 0.896 - - - - - - 0.717 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
51. arhgef11 ENSDARG00000052482 24 1.605 - 0.802 - - 0.803 - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
52. grnas ENSDARG00000091885 71 1.605 - 0.731 - - - - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
53. CSMD1 CSMD1 15 1.587 - 0.731 - - - - 0.856 - -
54. fem1a ENSDARG00000067966 11 1.538 - 0.704 0.834 - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
55. chico ENSDARG00000019588 77 1.459 0.746 0.713 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
56. si:ch211-76l23.6 si:ch211-76l23.6 68 1.41 - 0.709 - - - - 0.701 - -
57. nanog ENSDARG00000075113 10 1 - - - - - - 1.000 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
58. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
59. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
60. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
61. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
62. CT027800.1 CT027800.1 36 1 1.000 - - - - - - - -
63. si:ch211-213i16.4 8 1 - 1.000 - - - - - - - si:ch211-213i16.4, transcript variant X1
64. or115-14 ENSDARG00000094235 17 1 1.000 - - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
65. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - 1.000 - - - - - -
66. upp1 ENSDARG00000040869 2 1 1.000 - - - - - - - - uridine phosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-2]
67. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
68. RNF14 ENSDARG00000043905 41 1 1.000 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
69. gdpd4a ENSDARG00000102447 1 1 - - 1.000 - - - - - - glycerophosphodiester phosphodiesterase domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-091204-436]
70. si:dkey-47k16.3 si:dkey-47k16.3 17 1 1.000 - - - - - - - -
71. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
72. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
73. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
74. PARM1 ENSDARG00000114063 58 1 1.000 - - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
75. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - 1.000 - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
76. ddx26b 79 1 1.000 - - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
77. CABZ01069081.1 CABZ01069081.1 16 1 1.000 - - - - - - - -
78. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
79. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
80. camk1ga ENSDARG00000044526 5 1 - - 1.000 - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
81. avpr2aa ENSDARG00000007436 43 1 - - - - - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
82. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
83. CR933820.2 CR933820.2 152 1 - - 1.000 - - - - - -
84. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
85. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
86. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
87. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]
88. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
89. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
90. wu:fy63c09 1 1 1.000 - - - - - - - - wu:fy63c09
91. fam57bb ENSDARG00000074564 2 1 - - 1.000 - - - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
92. grk7b ENSDARG00000055534 17 1 - - - - - - 1.000 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
93. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
94. CU984579.1 ENSDARG00000116863 15 1 1.000 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
95. ABCC6 ABCC6 5 1 - - 1.000 - - - - - -
96. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
97. C25H12orf29 C25H12orf29 31 1 - - - - - - 1.000 - -
98. adck3 83 1 1.000 - - - - - - - - aarF domain containing kinase 3
99. CABZ01046997.1 ENSDARG00000073901 2 1 - - 1.000 - - - - - -
100. lppr5b lppr5b 23 1 - 1.000 - - - - - - -

There are 1314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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