Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rspo1

Gene Name Gene ID Reads Annotation
rspo1 ENSDARG00000104340, ENSDARG00000111655 13 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]










Genes with expression patterns similar to rspo1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
2. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 2 1.000 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
3. zp2.5 ENSDARG00000086522 15 2 1.000 - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
4. irgq2 ENSDARG00000068657 4 2 1.000 - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
5. tbx5b ENSDARG00000092060 37 2 1.000 - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
6. arl8 ENSDARG00000094709 6 2 1.000 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
7. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 2 1.000 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
8. bdkrb1 ENSDARG00000020744 4 2 - - 1.000 - - - 1.000 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
9. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 - 1.000 - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
10. pxn pxn 10 2 - - 1.000 - - - 1.000 - -
11. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
12. CU695076.1 CU695076.1 7 2 1.000 1.000 - - - - - - -
13. SEMA6B SEMA6B 35 2 - 1.000 - - - - 1.000 - -
14. si:ch211-234c11.3_1 ENSDARG00000093615 10 2 1.000 - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
15. si:ch211-10j20.7 si:ch211-10j20.7 8 2 - 1.000 - - - - 1.000 - -
16. FP565458.1 FP565458.1 61 1.975 1.000 0.975 - - - - - - -
17. CR847504.1 ENSDARG00000102515 29 1.958 - 1.000 - - - - 0.958 - -
18. si:ch211-255a21.4 si:ch211-255a21.4 26 1.941 - 1.000 0.941 - - - - - -
19. kcnip3a ENSDARG00000034229 63 1.933 - 1.000 - - - - 0.933 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
20. panx3 ENSDARG00000004627 7 1.93 - 1.000 - - 0.930 - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
21. cx55.5 13 1.93 - - 0.930 - - - 1.000 - - connexin 55.5, transcript variant X1
22. sod3b ENSDARG00000079183 39 1.863 1.000 - - - - - 0.863 - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
23. TMEM260 ENSDARG00000076362 63 1.863 1.000 - - - - - 0.863 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
24. si:dkey-58f10.9 si:dkey-58f10.9 86 1.859 0.942 0.917 - - - - - - -
25. SERINC3 SERINC3 21 1.856 0.856 1.000 - - - - - - -
26. FAM177B 9 1.85 - - - - 0.850 - 1.000 - - family with sequence similarity 177 member B
27. si:dkey-187i8.2 ENSDARG00000096624 8 1.847 - 1.000 - - 0.847 - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
28. cyp4f3 ENSDARG00000053530 10 1.847 1.000 - - - 0.847 - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
29. GMEB2 ENSDARG00000093240 6 1.843 1.000 - - 0.843 - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
30. SLC7A8 SLC7A8 25 1.834 - 1.000 0.834 - - - - - -
31. BX088525.2 ENSDARG00000117222 11 1.822 1.000 0.822 - - - - - - -
32. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1.802 1.000 0.802 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
33. CR391977.3 CR391977.3 76 1.796 - - 0.857 - - - 0.939 - -
34. WNK3 WNK3 36 1.794 - 1.000 - - - - 0.794 - -
35. si:ch211-194e1.8 si:ch211-194e1.8 14 1.777 1.000 - - 0.777 - - - - -
36. si:ch211-232k18.2 si:ch211-232k18.2 2 1.771 - 1.000 - - - - - - 0.771
37. tyro3 ENSDARG00000005356 4 1.771 - 1.000 - - - - - - 0.771 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
38. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.771 - 1.000 - - - - - - 0.771 purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
39. GRINA GRINA 12 1.771 - - - - - - 1.000 - 0.771
40. CR854891.1 CR854891.1 7 1.751 - - - - 0.751 - 1.000 - -
41. BX511189.1 BX511189.1 34 1.746 0.746 1.000 - - - - - - -
42. npffr1l3 ENSDARG00000010712 18 1.731 - 0.731 - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
43. c1qtnf2 ENSDARG00000059944 3 1.719 - - 1.000 - - - - - 0.719 C1q and TNF related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5133]
44. si:dkey-148e22.3 si:dkey-148e22.3 4 1.719 - - - - - - 1.000 - 0.719
45. rtn4rl2a ENSDARG00000052012 5 1.716 - 1.000 - - - - - - 0.716 reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
46. HEATR5B ENSDARG00000059116 3 1.716 - - - 0.777 - - 0.939 - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
47. cx45.6 cx45.6 26 1.713 1.000 0.713 - - - - - - -
48. ovca2 ENSDARG00000103748 38 1.709 1.000 0.709 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
49. CABZ01080142.1 CABZ01080142.1 52 1.649 0.886 0.763 - - - - - - -
50. helt ENSDARG00000056400 482 1.613 - 0.896 - - - - - - 0.717 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
51. arhgef11 ENSDARG00000052482 24 1.605 - 0.802 - - 0.803 - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
52. grnas ENSDARG00000091885 71 1.605 - 0.731 - - - - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
53. CSMD1 CSMD1 15 1.587 - 0.731 - - - - 0.856 - -
54. fem1a ENSDARG00000067966 11 1.538 - 0.704 0.834 - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
55. chico ENSDARG00000019588 77 1.459 0.746 0.713 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
56. si:ch211-76l23.6 si:ch211-76l23.6 68 1.41 - 0.709 - - - - 0.701 - -
57. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
58. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 - 1.000 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
59. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
60. si:zfos-979f1.2 ENSDARG00000011652 24 1 1.000 - - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
61. CT027800.1 CT027800.1 36 1 1.000 - - - - - - - -
62. tnfaip8l2a ENSDARG00000075592 90 1 - 1.000 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
63. CT573494.2 CT573494.2 58 1 - 1.000 - - - - - - -
64. CU104716.2 CU104716.2 10 1 - - - - - - 1.000 - -
65. KCNA2 KCNA2 66 1 - 1.000 - - - - - - -
66. si:dkey-22h13.2 ENSDARG00000112725 3 1 - 1.000 - - - - - - - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
67. cdx1b ENSDARG00000116139 113 1 - 1.000 - - - - - - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
68. cbx7b ENSDARG00000087181 5 1 - 1.000 - - - - - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
69. SOX8 SOX8 22 1 1.000 - - - - - - - -
70. gpr22 gpr22 115 1 - 1.000 - - - - - - -
71. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
72. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
73. BX649497.1 BX649497.1 0 1 - 1.000 - - - - - - -
74. GAS2_1 GAS2_1 16 1 - 1.000 - - - - - - -
75. EPM2AIP1 EPM2AIP1 4 1 - 1.000 - - - - - - -
76. zgc:92137 ENSDARG00000009443 0 1 - 1.000 - - - - - - - zgc:92137 [Source:ZFIN;Acc:ZDB-GENE-040801-179]
77. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
78. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
79. rhobtb2b ENSDARG00000089340 4 1 - 1.000 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
80. satb2 ENSDARG00000061885 6 1 - - - - - - 1.000 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
81. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - 1.000 - - - - - - -
82. CABZ01084010.1 CABZ01084010.1 4 1 - - 1.000 - - - - - -
83. cdc14aa ENSDARG00000013858 18 1 1.000 - - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
84. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - 1.000 - - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
85. LAMP1 1 1 - - 1.000 - - - - - - lysosomal-associated membrane protein 1
86. BX571969.1 BX571969.1 8 1 - 1.000 - - - - - - -
87. GRAMD3 GRAMD3 4 1 - 1.000 - - - - - - -
88. vmhcl 119 1 1.000 - - - - - - - - ventricular myosin heavy chain-like
89. U1_23 U1_23 1 1 - - 1.000 - - - - - -
90. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
91. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
92. rgs5b ENSDARG00000017860 55 1 - 1.000 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
93. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
94. CABZ01085177.1 ENSDARG00000104644 6 1 - 1.000 - - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
95. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - - 1.000 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
96. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
97. pkhd1l1 ENSDARG00000091116 23 1 - - - - - - 1.000 - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
98. mgp ENSDARG00000086189 9 1 - - 1.000 - - - - - - matrix Gla protein [Source:ZFIN;Acc:ZDB-GENE-060928-1]
99. LRP3 ENSDARG00000008485 1401 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
100. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1 - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]

There are 1314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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