Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rspo1

Gene Name Gene ID Reads Annotation
rspo1 ENSDARG00000104340, ENSDARG00000111655 13 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]










Genes with expression patterns similar to rspo1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
2. si:ch211-10j20.7 si:ch211-10j20.7 8 2 - 1.000 - - - - 1.000 - -
3. si:ch211-234c11.3_1 ENSDARG00000093615 10 2 1.000 - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
4. SEMA6B SEMA6B 35 2 - 1.000 - - - - 1.000 - -
5. CU695076.1 CU695076.1 7 2 1.000 1.000 - - - - - - -
6. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
7. arl8 ENSDARG00000094709 6 2 1.000 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
8. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 2 1.000 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
9. tbx5b ENSDARG00000092060 37 2 1.000 - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
10. irgq2 ENSDARG00000068657 4 2 1.000 - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
11. zp2.5 ENSDARG00000086522 15 2 1.000 - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
12. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 2 1.000 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
13. pxn pxn 10 2 - - 1.000 - - - 1.000 - -
14. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 - 1.000 - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
15. bdkrb1 ENSDARG00000020744 4 2 - - 1.000 - - - 1.000 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
16. FP565458.1 FP565458.1 61 1.975 1.000 0.975 - - - - - - -
17. CR847504.1 ENSDARG00000102515 29 1.958 - 1.000 - - - - 0.958 - -
18. si:ch211-255a21.4 si:ch211-255a21.4 26 1.941 - 1.000 0.941 - - - - - -
19. kcnip3a ENSDARG00000034229 63 1.933 - 1.000 - - - - 0.933 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
20. cx55.5 13 1.93 - - 0.930 - - - 1.000 - - connexin 55.5, transcript variant X1
21. panx3 ENSDARG00000004627 7 1.93 - 1.000 - - 0.930 - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
22. TMEM260 ENSDARG00000076362 63 1.863 1.000 - - - - - 0.863 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
23. sod3b ENSDARG00000079183 39 1.863 1.000 - - - - - 0.863 - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
24. si:dkey-58f10.9 si:dkey-58f10.9 86 1.859 0.942 0.917 - - - - - - -
25. SERINC3 SERINC3 21 1.856 0.856 1.000 - - - - - - -
26. FAM177B 9 1.85 - - - - 0.850 - 1.000 - - family with sequence similarity 177 member B
27. cyp4f3 ENSDARG00000053530 10 1.847 1.000 - - - 0.847 - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
28. si:dkey-187i8.2 ENSDARG00000096624 8 1.847 - 1.000 - - 0.847 - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
29. GMEB2 ENSDARG00000093240 6 1.843 1.000 - - 0.843 - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
30. SLC7A8 SLC7A8 25 1.834 - 1.000 0.834 - - - - - -
31. BX088525.2 ENSDARG00000117222 11 1.822 1.000 0.822 - - - - - - -
32. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1.802 1.000 0.802 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
33. CR391977.3 CR391977.3 76 1.796 - - 0.857 - - - 0.939 - -
34. WNK3 WNK3 36 1.794 - 1.000 - - - - 0.794 - -
35. si:ch211-194e1.8 si:ch211-194e1.8 14 1.777 1.000 - - 0.777 - - - - -
36. GRINA GRINA 12 1.771 - - - - - - 1.000 - 0.771
37. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.771 - 1.000 - - - - - - 0.771 purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
38. si:ch211-232k18.2 si:ch211-232k18.2 2 1.771 - 1.000 - - - - - - 0.771
39. tyro3 ENSDARG00000005356 4 1.771 - 1.000 - - - - - - 0.771 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
40. CR854891.1 CR854891.1 7 1.751 - - - - 0.751 - 1.000 - -
41. BX511189.1 BX511189.1 34 1.746 0.746 1.000 - - - - - - -
42. npffr1l3 ENSDARG00000010712 18 1.731 - 0.731 - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
43. c1qtnf2 ENSDARG00000059944 3 1.719 - - 1.000 - - - - - 0.719 C1q and TNF related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5133]
44. si:dkey-148e22.3 si:dkey-148e22.3 4 1.719 - - - - - - 1.000 - 0.719
45. rtn4rl2a ENSDARG00000052012 5 1.716 - 1.000 - - - - - - 0.716 reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
46. HEATR5B ENSDARG00000059116 3 1.716 - - - 0.777 - - 0.939 - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
47. cx45.6 cx45.6 26 1.713 1.000 0.713 - - - - - - -
48. ovca2 ENSDARG00000103748 38 1.709 1.000 0.709 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
49. CABZ01080142.1 CABZ01080142.1 52 1.649 0.886 0.763 - - - - - - -
50. helt ENSDARG00000056400 482 1.613 - 0.896 - - - - - - 0.717 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
51. grnas ENSDARG00000091885 71 1.605 - 0.731 - - - - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
52. arhgef11 ENSDARG00000052482 24 1.605 - 0.802 - - 0.803 - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
53. CSMD1 CSMD1 15 1.587 - 0.731 - - - - 0.856 - -
54. fem1a ENSDARG00000067966 11 1.538 - 0.704 0.834 - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
55. chico ENSDARG00000019588 77 1.459 0.746 0.713 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
56. si:ch211-76l23.6 si:ch211-76l23.6 68 1.41 - 0.709 - - - - 0.701 - -
57. plekha7a ENSDARG00000060813 179 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
58. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
59. flnb ENSDARG00000092281 10 1 1.000 - - - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
60. gata4 ENSDARG00000098952 11 1 - - - - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
61. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
62. slc6a18 ENSDARG00000068387 6 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
63. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1 - 1.000 - - - - - - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
64. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
65. mstnb ENSDARG00000069133 3 1 - 1.000 - - - - - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
66. si:dkey-85n7.8 ENSDARG00000095793 31 1 1.000 - - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
67. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
68. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
69. mettl21a ENSDARG00000012051 86 1 1.000 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
70. zgc:195633 19 1 - 1.000 - - - - - - - zgc:195633
71. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
72. si:ch73-77n15.1 si:ch73-77n15.1 2 1 - - - - - - 1.000 - -
73. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
74. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
75. CU984579.1 ENSDARG00000116863 15 1 1.000 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
76. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
77. CABZ01046997.1 ENSDARG00000073901 2 1 - - 1.000 - - - - - -
78. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
79. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
80. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
81. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
82. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
83. l3mbtl3 ENSDARG00000025983 12 1 - 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
84. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
85. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
86. FRMD7 ENSDARG00000068958 17 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
87. si:dkey-4j21.1 17 1 - 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
88. cyb561 ENSDARG00000038176 55 1 1.000 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
89. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
90. CU928854.1 CU928854.1 3 1 - 1.000 - - - - - - -
91. PCDH10 PCDH10 7 1 - - - - - - 1.000 - -
92. CCDC50_1 CCDC50_1 1 1 - 1.000 - - - - - - -
93. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
94. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
95. ME1 ENSDARG00000053215 8 1 - 1.000 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
96. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - - - - - 1.000 - -
97. si:ch211-125e6.12 ENSDARG00000092090 3 1 - - 1.000 - - - - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
98. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - 1.000 - - - - - -
99. si:ch211-190k17.13 si:ch211-190k17.13 48 1 - - - - - - 1.000 - -
100. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]

There are 1314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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