Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rspo1

Gene Name Gene ID Reads Annotation
rspo1 ENSDARG00000104340, ENSDARG00000111655 13 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]










Genes with expression patterns similar to rspo1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
2. arl8 ENSDARG00000094709 6 2 1.000 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
3. tbx5b ENSDARG00000092060 37 2 1.000 - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
4. irgq2 ENSDARG00000068657 4 2 1.000 - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
5. si:ch211-234c11.3_1 ENSDARG00000093615 10 2 1.000 - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
6. zp2.5 ENSDARG00000086522 15 2 1.000 - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
7. CU695076.1 CU695076.1 7 2 1.000 1.000 - - - - - - -
8. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 - 1.000 - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
9. pxn pxn 10 2 - - 1.000 - - - 1.000 - -
10. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 2 1.000 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
11. bdkrb1 ENSDARG00000020744 4 2 - - 1.000 - - - 1.000 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
12. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
13. si:ch211-10j20.7 si:ch211-10j20.7 8 2 - 1.000 - - - - 1.000 - -
14. SEMA6B SEMA6B 35 2 - 1.000 - - - - 1.000 - -
15. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 2 1.000 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
16. FP565458.1 FP565458.1 61 1.975 1.000 0.975 - - - - - - -
17. CR847504.1 ENSDARG00000102515 29 1.958 - 1.000 - - - - 0.958 - -
18. si:ch211-255a21.4 si:ch211-255a21.4 26 1.941 - 1.000 0.941 - - - - - -
19. kcnip3a ENSDARG00000034229 63 1.933 - 1.000 - - - - 0.933 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
20. panx3 ENSDARG00000004627 7 1.93 - 1.000 - - 0.930 - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
21. cx55.5 13 1.93 - - 0.930 - - - 1.000 - - connexin 55.5, transcript variant X1
22. sod3b ENSDARG00000079183 39 1.863 1.000 - - - - - 0.863 - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
23. TMEM260 ENSDARG00000076362 63 1.863 1.000 - - - - - 0.863 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
24. si:dkey-58f10.9 si:dkey-58f10.9 86 1.859 0.942 0.917 - - - - - - -
25. SERINC3 SERINC3 21 1.856 0.856 1.000 - - - - - - -
26. FAM177B 9 1.85 - - - - 0.850 - 1.000 - - family with sequence similarity 177 member B
27. si:dkey-187i8.2 ENSDARG00000096624 8 1.847 - 1.000 - - 0.847 - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
28. cyp4f3 ENSDARG00000053530 10 1.847 1.000 - - - 0.847 - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
29. GMEB2 ENSDARG00000093240 6 1.843 1.000 - - 0.843 - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
30. SLC7A8 SLC7A8 25 1.834 - 1.000 0.834 - - - - - -
31. BX088525.2 ENSDARG00000117222 11 1.822 1.000 0.822 - - - - - - -
32. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1.802 1.000 0.802 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
33. CR391977.3 CR391977.3 76 1.796 - - 0.857 - - - 0.939 - -
34. WNK3 WNK3 36 1.794 - 1.000 - - - - 0.794 - -
35. si:ch211-194e1.8 si:ch211-194e1.8 14 1.777 1.000 - - 0.777 - - - - -
36. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.771 - 1.000 - - - - - - 0.771 purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
37. tyro3 ENSDARG00000005356 4 1.771 - 1.000 - - - - - - 0.771 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
38. si:ch211-232k18.2 si:ch211-232k18.2 2 1.771 - 1.000 - - - - - - 0.771
39. GRINA GRINA 12 1.771 - - - - - - 1.000 - 0.771
40. CR854891.1 CR854891.1 7 1.751 - - - - 0.751 - 1.000 - -
41. BX511189.1 BX511189.1 34 1.746 0.746 1.000 - - - - - - -
42. npffr1l3 ENSDARG00000010712 18 1.731 - 0.731 - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
43. si:dkey-148e22.3 si:dkey-148e22.3 4 1.719 - - - - - - 1.000 - 0.719
44. c1qtnf2 ENSDARG00000059944 3 1.719 - - 1.000 - - - - - 0.719 C1q and TNF related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5133]
45. rtn4rl2a ENSDARG00000052012 5 1.716 - 1.000 - - - - - - 0.716 reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
46. HEATR5B ENSDARG00000059116 3 1.716 - - - 0.777 - - 0.939 - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
47. cx45.6 cx45.6 26 1.713 1.000 0.713 - - - - - - -
48. ovca2 ENSDARG00000103748 38 1.709 1.000 0.709 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
49. CABZ01080142.1 CABZ01080142.1 52 1.649 0.886 0.763 - - - - - - -
50. helt ENSDARG00000056400 482 1.613 - 0.896 - - - - - - 0.717 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
51. grnas ENSDARG00000091885 71 1.605 - 0.731 - - - - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
52. arhgef11 ENSDARG00000052482 24 1.605 - 0.802 - - 0.803 - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
53. CSMD1 CSMD1 15 1.587 - 0.731 - - - - 0.856 - -
54. fem1a ENSDARG00000067966 11 1.538 - 0.704 0.834 - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
55. chico ENSDARG00000019588 77 1.459 0.746 0.713 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
56. si:ch211-76l23.6 si:ch211-76l23.6 68 1.41 - 0.709 - - - - 0.701 - -
57. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
58. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
59. gphnb ENSDARG00000100851 118 1 - 1.000 - - - - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
60. crygm2d10 ENSDARG00000087765 358 1 - 1.000 - - - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
61. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
62. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
63. CABZ01078481.1 CABZ01078481.1 6 1 1.000 - - - - - - - -
64. CT573494.2 CT573494.2 58 1 - 1.000 - - - - - - -
65. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
66. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 1 - 1.000 - - - - - - -
67. U1_38 U1_38 1 1 - - - - - - 1.000 - -
68. EPM2AIP1 EPM2AIP1 4 1 - 1.000 - - - - - - -
69. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
70. slc10a4 ENSDARG00000009131 51 1 1.000 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
71. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
72. tob1a ENSDARG00000032619 3 1 1.000 - - - - - - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
73. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
74. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
75. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
76. CABZ01085177.1 ENSDARG00000104644 6 1 - 1.000 - - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
77. si:dkey-117k10.8 si:dkey-117k10.8 17 1 1.000 - - - - - - - -
78. CELA1 CELA1 14 1 - - - - - - 1.000 - -
79. GPR141_1 GPR141_1 33 1 - - 1.000 - - - - - -
80. CABZ01080492.1 CABZ01080492.1 495 1 1.000 - - - - - - - -
81. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - 1.000 - - - - - - -
82. PEG3_36 PEG3_36 3 1 - 1.000 - - - - - - -
83. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
84. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
85. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
86. GRAMD3 GRAMD3 4 1 - 1.000 - - - - - - -
87. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
88. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
89. zgc:152977 ENSDARG00000077178 59 1 - - - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
90. si:dkey-85n7.8 ENSDARG00000095793 31 1 1.000 - - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
91. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
92. NACC1 NACC1 9 1 - 1.000 - - - - - - -
93. bsk146 ENSDARG00000099069 274 1 - 1.000 - - - - - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
94. cyb561 ENSDARG00000038176 55 1 1.000 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
95. cacnb2a ENSDARG00000099045 374 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
96. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
97. slc12a5b ENSDARG00000078187 329 1 - 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
98. vat1l ENSDARG00000101280 1 1 - 1.000 - - - - - - - vesicle amine transport 1-like [Source:ZFIN;Acc:ZDB-GENE-080204-21]
99. FAM196B FAM196B 1 1 1.000 - - - - - - - -
100. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]

There are 1314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA