Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rsph3

Gene Name Gene ID Reads Annotation
rsph3 ENSDARG00000043470 74 radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]










Genes with expression patterns similar to rsph3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rsph3 ENSDARG00000043470 74 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]
2. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 2.235 0.728 0.748 - - - 0.759 - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
3. sst2 ENSDARG00000014190 617 1.722 0.778 - - - - - 0.944 - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
4. RIBC2 ENSDARG00000075177 445 1.667 0.797 - 0.870 - - - - - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
5. dpyda dpyda 12 1.663 0.904 - - - - 0.759 - - -
6. ankmy1 ENSDARG00000062702 52 1.648 0.741 - 0.907 - - - - - - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
7. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.634 0.787 - 0.847 - - - - - - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
8. e2f5 ENSDARG00000038812 388 1.619 - - 0.912 - - - 0.707 - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
9. mid2 ENSDARG00000034871 1001 1.598 0.884 - 0.714 - - - - - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
10. kcnj1a.1 ENSDARG00000091232 110 1.59 0.844 - - - - - 0.746 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
11. crim1 ENSDARG00000029668 118 1.59 - - 0.845 - - - 0.745 - - cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:ZFIN;Acc:ZDB-GENE-040312-2]
12. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.587 0.778 - 0.809 - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
13. opn4b ENSDARG00000053929 143 1.58 - 0.729 - - - 0.851 - - - opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
14. C25H11orf74 C25H11orf74 161 1.576 - - 0.817 - - 0.759 - - -
15. dnal1 ENSDARG00000034042 339 1.569 0.743 - 0.826 - - - - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
16. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1.554 0.778 - - - 0.776 - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
17. nphp4 ENSDARG00000069014 77 1.552 0.714 - - - - - 0.838 - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
18. colm colm 36 1.547 - - - - 0.737 0.810 - - -
19. CABZ01049058.1 CABZ01049058.1 7 1.537 0.778 - - - - 0.759 - - -
20. tcf23 ENSDARG00000087381 6 1.537 0.778 - - - - 0.759 - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
21. mb ENSDARG00000031952 351 1.526 0.792 - - - - - 0.734 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
22. zgc:153738 ENSDARG00000069230 84 1.526 - - 0.804 - - - 0.722 - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
23. lrrcc1 ENSDARG00000078535 118 1.522 - 0.763 - - - 0.759 - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
24. CR354382.1 CR354382.1 42 1.507 - 0.748 - - - 0.759 - - -
25. MYO15B ENSDARG00000074852 6 1.507 - 0.748 - - - 0.759 - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
26. PCOLCE PCOLCE 25 1.507 - 0.748 - - - 0.759 - - -
27. C3AR1 18 1.507 - 0.748 - - - 0.759 - - - C3a anaphylatoxin chemotactic receptor
28. si:busm1-180g5.7 si:busm1-180g5.7 15 1.501 - 0.742 - - - 0.759 - - -
29. si:ch211-152p23.2 ENSDARG00000094519 4 1.5 0.778 - - - - - 0.722 - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
30. COL26A1 COL26A1 9 1.496 0.728 0.768 - - - - - - -
31. esrrb ENSDARG00000100847 636 1.472 0.727 - - - - - 0.745 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
32. grin2db ENSDARG00000070620 101 1.47 0.728 0.742 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b [Source:ZFIN;Acc:ZDB-GENE-100920-7]
33. mlpha ENSDARG00000070991, ENSDARG00000112518, ENSDARG00000114121 198 1.453 - - - - 0.733 - 0.720 - - melanophilin a [Source:ZFIN;Acc:ZDB-GENE-050208-724]
34. MFAP4_7 MFAP4_7 43 1.445 0.725 - - - 0.720 - - - -
35. men1 ENSDARG00000089456 10 1 - - - - - 1.000 - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
36. tnnt2a ENSDARG00000020610 313 0.972 0.972 - - - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
37. ITGAE ITGAE 53 0.972 0.972 - - - - - - - -
38. hoxd13a ENSDARG00000059256 1190 0.972 0.972 - - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
39. lad1 ENSDARG00000022698 127 0.972 0.972 - - - - - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
40. trmt1 ENSDARG00000010978 72 0.972 0.972 - - - - - - - - tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]
41. glipr2 ENSDARG00000041724 41 0.97 - - - - - 0.970 - - - GLI pathogenesis-related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4424]
42. pm20d1.2 ENSDARG00000062096 97 0.961 0.961 - - - - - - - - peptidase M20 domain containing 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061013-637]
43. si:dkeyp-87a6.1 si:dkeyp-87a6.1 118 0.959 - - - - - 0.959 - - -
44. zgc:110377 zgc:110377 193 0.953 - - - - - 0.953 - - -
45. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 0.951 - - 0.951 - - - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
46. HSPB11 ENSDARG00000002204 170 0.951 0.951 - - - - - - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
47. METTL15 ENSDARG00000089236 39 0.946 - - 0.946 - - - - - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
48. fgf11a ENSDARG00000069662, ENSDARG00000112344, ENSDARG00000114321 104 0.943 0.943 - - - - - - - - fibroblast growth factor 11a [Source:ZFIN;Acc:ZDB-GENE-050221-5]
49. mycbpap ENSDARG00000069194 32 0.941 - - 0.941 - - - - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
50. si:dkey-163m14.6 5 0.94 - - - - - 0.940 - - - si:dkey-163m14.6
51. si:busm1-266f07.2 ENSDARG00000031745 19 0.94 - - - - - 0.940 - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
52. gdf7 ENSDARG00000042784 36 0.94 - - - - - 0.940 - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
53. adamts13 ENSDARG00000076270 8 0.94 - - - - - 0.940 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
54. zgc:171844 ENSDARG00000067813 30 0.94 - - - - - 0.940 - - - zgc:171844 [Source:ZFIN;Acc:ZDB-GENE-080516-8]
55. C20H20orf26 C20H20orf26 4 0.94 - - - - - 0.940 - - -
56. BX927314.1 BX927314.1 47 0.94 - - - - - 0.940 - - -
57. gas5 279 0.94 - - - - - 0.940 - - - growth arrest-specific 5, transcript variant X4
58. lgr6 181 0.936 - 0.936 - - - - - - - leucine rich repeat containing G protein-coupled receptor 6
59. sod2 ENSDARG00000042644 1382 0.935 0.935 - - - - - - - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
60. henmt1 ENSDARG00000018871 46 0.934 0.934 - - - - - - - - HEN methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-387]
61. TRAF3IP2 TRAF3IP2 153 0.934 - - - - - 0.934 - - -
62. si:ch211-102c2.8 ENSDARG00000093823 168 0.931 0.931 - - - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
63. gdf10b ENSDARG00000073891 116 0.928 - - 0.928 - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
64. SLC46A2 ENSDARG00000075229 78 0.928 0.928 - - - - - - - - solute carrier family 46 member 2 [Source:ZFIN;Acc:ZDB-GENE-170126-3]
65. CU896555.1 CU896555.1 27 0.924 - 0.924 - - - - - - -
66. apex2 ENSDARG00000008472 39 0.924 - 0.924 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
67. BX323793.1 ENSDARG00000104134 24 0.924 - 0.924 - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
68. si:dkey-204f11.49p si:dkey-204f11.49p 97 0.924 - 0.924 - - - - - - -
69. fto ENSDARG00000044216 33 0.924 - 0.924 - - - - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
70. slc4a4b ENSDARG00000044808 9 0.924 - 0.924 - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
71. setmar ENSDARG00000074836 29 0.924 - 0.924 - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
72. wdr65 wdr65 251 0.923 0.923 - - - - - - - -
73. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.923 - 0.923 - - - - - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
74. FOLR1 FOLR1 25 0.922 0.922 - - - - - - - -
75. igfbp3 ENSDARG00000099144 269 0.922 0.922 - - - - - - - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
76. bokb ENSDARG00000008807 29 0.921 - - - - - 0.921 - - - BOK, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-040426-1346]
77. zgc:66443 ENSDARG00000057707 624 0.921 - - - - - - 0.921 - - zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
78. FP236810.2 ENSDARG00000113218 140 0.919 0.919 - - - - - - - - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
79. cc2d2a ENSDARG00000090971 363 0.917 0.917 - - - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
80. si:dkey-225f23.4 ENSDARG00000102520 86 0.915 - - 0.915 - - - - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
81. ctssb.1 ctssb.1 1368 0.915 - - - - - 0.915 - - -
82. TTC17 ENSDARG00000044812 124 0.914 - 0.914 - - - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
83. cfp ENSDARG00000094451 211 0.912 0.912 - - - - - - - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
84. arl16 ENSDARG00000059498, ENSDARG00000110386 229 0.912 - 0.912 - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
85. fut7 ENSDARG00000044775 25 0.911 - - 0.911 - - - - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
86. efhc2 ENSDARG00000004204 59 0.904 0.904 - - - - - - - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
87. tecrl2a ENSDARG00000089485 12 0.901 - - 0.901 - - - - - - trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138]
88. si:ch211-147d7.5 ENSDARG00000095457 132 0.9 - - 0.900 - - - - - - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
89. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 0.9 0.900 - - - - - - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
90. Metazoa_SRP_13 Metazoa_SRP_13 7 0.898 - - 0.898 - - - - - -
91. si:ch1073-312b22.1 si:ch1073-312b22.1 6 0.898 - - 0.898 - - - - - -
92. ENSDARG00000089996 ENSDARG00000089996 17 0.898 - - 0.898 - - - - - -
93. si:ch211-286m4.1 si:ch211-286m4.1 47 0.898 - - - - - 0.898 - - -
94. si:dkey-285e18.5 ENSDARG00000093665 5 0.898 - - 0.898 - - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
95. tdrd9 ENSDARG00000013453 22 0.897 0.897 - - - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
96. radil ENSDARG00000079779 14 0.897 - - 0.897 - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
97. FOXN2 FOXN2 118 0.897 0.897 - - - - - - - -
98. med30 ENSDARG00000101115 133 0.897 - - - - - 0.897 - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
99. ddx43 ENSDARG00000022614 48 0.897 - - 0.897 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
100. si:dkey-4c15.14 ENSDARG00000094410 107 0.897 0.897 - - - - - - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]

There are 963 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA