Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rrs1

Gene Name Gene ID Reads Annotation
rrs1 ENSDARG00000003941 1257 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]










Genes with expression patterns similar to rrs1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrs1 ENSDARG00000003941 1257 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]
2. bxdc2 ENSDARG00000098935 1348 1.635 - 0.915 - - - - - 0.720 - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
3. si:dkey-242k1.6 ENSDARG00000101205 112 1.626 - 0.789 - - - - 0.837 - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
4. cox6a2 ENSDARG00000054588, ENSDARG00000116120 121 1.589 - - - - - 0.724 0.865 - - cytochrome c oxidase subunit 6A2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
5. lphn3.1 lphn3.1 756 1.57 - 0.821 - - - - - 0.749 -
6. NAV2 NAV2 538 1.566 - 0.785 - - - - - 0.781 -
7. pmpca ENSDARG00000102607 1024 1.566 - 0.810 - - - 0.756 - - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
8. cox16 ENSDARG00000039136 1066 1.563 - 0.782 - - - - 0.781 - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
9. CCDC134_1 CCDC134_1 200 1.542 - 0.706 - - - - 0.836 - -
10. fam13a ENSDARG00000075564 1905 1.541 - 0.816 - - - - 0.725 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
11. spata5l1 ENSDARG00000061763 127 1.527 - 0.755 - - - - 0.772 - - spermatogenesis associated 5-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-204]
12. si:ch211-197h24.6 ENSDARG00000091631 1933 1.512 - 0.781 - - - - - 0.731 - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
13. hmbsa ENSDARG00000008840 2601 1.509 - - - - - 0.801 0.708 - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
14. lgmn ENSDARG00000039150 2788 1.502 - - - - - 0.751 0.751 - - legumain [Source:ZFIN;Acc:ZDB-GENE-021030-1]
15. rrp12 ENSDARG00000022410 2236 1.498 - 0.756 - - - 0.742 - - - ribosomal RNA processing 12 homolog [Source:ZFIN;Acc:ZDB-GENE-050706-182]
16. TACC2 1702 1.491 - 0.764 - - - - - 0.727 - transforming, acidic coiled-coil containing protein 2, transcript variant X17
17. rasa1b ENSDARG00000073665 397 1.489 - 0.728 - - - - 0.761 - - RAS p21 protein activator (GTPase activating protein) 1b [Source:ZFIN;Acc:ZDB-GENE-090311-50]
18. leo1 ENSDARG00000055357 1644 1.489 - 0.743 - - - - - 0.746 - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
19. mrpl36 ENSDARG00000070607 4069 1.481 - - - - - 0.747 0.734 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
20. ptpn2a ENSDARG00000016481 493 1.478 - 0.717 - - - - 0.761 - - protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
21. ints1 ENSDARG00000100419 1958 1.472 - 0.734 - - - - - 0.738 - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
22. nhp2l1b nhp2l1b 3898 1.447 - - - - - - 0.740 0.707 -
23. gpr161 ENSDARG00000055659 454 1.431 - 0.712 - - - - 0.719 - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
24. mrpl37 ENSDARG00000062916 1600 1.427 - - - - - 0.722 0.705 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
25. TYRP1 TYRP1 1450 1.427 - 0.710 - - - - 0.717 - -
26. nol7 ENSDARG00000075795 1559 1.417 - 0.704 - - - - - 0.713 - nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
27. marcksa ENSDARG00000004049 2518 1.415 - 0.706 - - - - - 0.709 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
28. gadd45gip1 ENSDARG00000039338 1878 0.93 - 0.930 - - - - - - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
29. ccdc136b ENSDARG00000057921, ENSDARG00000075513 387 0.929 - - - - - - 0.929 - - coiled-coil domain containing 136b [Source:ZFIN;Acc:ZDB-GENE-081104-244]
30. zgc:153629 zgc:153629 1121 0.916 - 0.916 - - - - - - -
31. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 0.915 - - - - - - 0.915 - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
32. tmem35 ENSDARG00000052567 5685 0.914 - 0.914 - - - - - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
33. tcf7l1b ENSDARG00000007369 2785 0.91 - 0.910 - - - - - - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
34. six4b ENSDARG00000031983 265 0.898 - 0.898 - - - - - - - SIX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-010201-1]
35. eif4e2rs1 ENSDARG00000015835 589 0.895 - 0.895 - - - - - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
36. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.895 - 0.895 - - - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
37. CR391961.2 CR391961.2 107 0.893 - - - - - - 0.893 - -
38. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 0.885 - - - - - - 0.885 - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
39. FGD5 FGD5 250 0.885 - - - - - - 0.885 - -
40. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 0.884 - 0.884 - - - - - - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
41. esrrb ENSDARG00000100847 636 0.884 - - - - - - 0.884 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
42. tfb2m ENSDARG00000074756 600 0.884 - 0.884 - - - - - - - transcription factor B2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070521-3]
43. kcnj1a.1 ENSDARG00000091232 110 0.882 - - - - - - 0.882 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
44. arsh ENSDARG00000002299 331 0.882 - 0.882 - - - - - - - arylsulfatase H [Source:ZFIN;Acc:ZDB-GENE-081104-120]
45. sele ENSDARG00000009123 122 0.88 - - - - - - 0.880 - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
46. mpx ENSDARG00000019521 562 0.88 - - - - - - 0.880 - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
47. mb ENSDARG00000031952 351 0.879 - - - - - - 0.879 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
48. actr1 ENSDARG00000011611 3879 0.879 - 0.879 - - - - - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
49. bzw2 ENSDARG00000035918 1502 0.879 - 0.879 - - - - - - - basic leucine zipper and W2 domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-746]
50. mir21-2 18 0.876 - - - - - - 0.876 - - microRNA 21-2
51. map4k3a ENSDARG00000087742 771 0.875 - 0.875 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
52. NOG NOG 324 0.874 - - - - - - 0.874 - -
53. BX004994.2 BX004994.2 17 0.873 - - - - - - 0.873 - -
54. cerk ENSDARG00000069169 897 0.873 - 0.873 - - - - - - - ceramide kinase [Source:ZFIN;Acc:ZDB-GENE-041210-210]
55. BAIAP2L2 BAIAP2L2 31 0.868 - - - - - - 0.868 - -
56. TULP2 TULP2 38 0.868 - - - - - - 0.868 - -
57. dbpb ENSDARG00000057652, ENSDARG00000116703 71 0.868 - - - - - - 0.868 - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
58. zgc:158446 36 0.868 - - - - - - 0.868 - - zgc:158446
59. atp1a1a.4 ENSDARG00000001870 1864 0.868 - - - - - - 0.868 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
60. sod2 ENSDARG00000042644 1382 0.866 - - - - - - 0.866 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
61. pou3f3a ENSDARG00000042032 2835 0.864 - 0.864 - - - - - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
62. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 0.863 - 0.863 - - - - - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
63. thoc3 ENSDARG00000056517 909 0.863 - 0.863 - - - - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
64. mrps2 ENSDARG00000103198 2410 0.862 - - - - - - 0.862 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
65. klfd klfd 625 0.861 - 0.861 - - - - - - -
66. selrc1 selrc1 453 0.861 - - - - - - 0.861 - -
67. arid2 ENSDARG00000007413 4413 0.86 - 0.860 - - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
68. edn1 ENSDARG00000036912 74 0.859 - - - - - - 0.859 - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
69. eif2b3 ENSDARG00000018106 381 0.859 - 0.859 - - - - - - - eukaryotic translation initiation factor 2B, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1039]
70. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.857 - 0.857 - - - - - - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
71. lca5 ENSDARG00000076153, ENSDARG00000114127 164 0.856 - - - - - - 0.856 - - Leber congenital amaurosis 5 [Source:ZFIN;Acc:ZDB-GENE-090313-268]
72. recql ENSDARG00000007175 501 0.853 - - - - - - 0.853 - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
73. CCDC180 ENSDARG00000032372 21 0.852 - - - - - - 0.852 - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
74. rassf9 ENSDARG00000074721 448 0.851 - - - - - - 0.851 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
75. slc12a3 ENSDARG00000013855 990 0.85 - - - - - - 0.850 - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
76. stil ENSDARG00000024904, ENSDARG00000114288, ENSDARG00000116436 324 0.85 - 0.850 - - - - - - - scl/tal1 interrupting locus [Source:ZFIN;Acc:ZDB-GENE-020419-39]
77. penkb ENSDARG00000036045 304 0.849 - - - - - - 0.849 - - proenkephalin b [Source:ZFIN;Acc:ZDB-GENE-030729-3]
78. gon4l ENSDARG00000005867 982 0.849 - 0.849 - - - - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
79. slc7a6os ENSDARG00000010596 1599 0.849 - 0.849 - - - - - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
80. dhodh ENSDARG00000051889 401 0.849 - 0.849 - - - - - - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
81. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 0.847 - 0.847 - - - - - - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
82. ccl-c5a ccl-c5a 217 0.847 - - - - - - 0.847 - -
83. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.846 - - - - - - - 0.846 - PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
84. mpp6a ENSDARG00000056892 324 0.846 - 0.846 - - - - - - - membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-050506-35]
85. scyl3 ENSDARG00000027046 643 0.845 - 0.845 - - - - - - - SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559]
86. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 0.843 - 0.843 - - - - - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
87. diablob ENSDARG00000014956 745 0.843 - 0.843 - - - - - - - diablo, IAP-binding mitochondrial protein b [Source:ZFIN;Acc:ZDB-GENE-070112-202]
88. kif6 ENSDARG00000053240 75 0.843 - - - - - - 0.843 - - kinesin family member 6 [Source:ZFIN;Acc:ZDB-GENE-061027-130]
89. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 0.841 - 0.841 - - - - - - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
90. ADAM12 ENSDARG00000116062 35 0.84 - - - - - - 0.840 - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
91. ptprb ENSDARG00000076624 323 0.839 - - - - - - 0.839 - - protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
92. gpr182 ENSDARG00000036616 455 0.839 - - - - - - 0.839 - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
93. ppp1r14c ENSDARG00000077341 1587 0.838 - - - - - - 0.838 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
94. cstf2_1 ENSDARG00000090788 709 0.837 - 0.837 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
95. RAPGEF2 ENSDARG00000005482 2068 0.837 - - - - - 0.837 - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
96. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 0.836 - 0.836 - - - - - - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
97. ano2 ENSDARG00000101363 50 0.836 - - - - - - 0.836 - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
98. si:ch211-152p23.2 ENSDARG00000094519 4 0.836 - - - - - - 0.836 - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
99. LINS LINS 42 0.836 - - - - - - 0.836 - -
100. si:ch211-197h24.7 si:ch211-197h24.7 25 0.836 - - - - - - 0.836 - -

There are 787 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA