Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rrp7a

Gene Name Gene ID Reads Annotation
rrp7a ENSDARG00000098934 1123 ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]










Genes with expression patterns similar to rrp7a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrp7a ENSDARG00000098934 1123 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
2. si:ch211-161h7.4 ENSDARG00000087238 4399 2.273 0.851 - - 0.710 0.712 - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
3. cyr61 ENSDARG00000023062 1213 1.908 0.929 - - - - - 0.979 - - cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
4. eif3s10 ENSDARG00000076815 10822 1.871 - - - - 0.908 - 0.963 - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
5. ppp2ca ENSDARG00000030224 2760 1.85 0.860 - - - - - 0.990 - - protein phosphatase 2, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-050417-441]
6. nup98 ENSDARG00000074955 3998 1.837 - - - - 0.840 - 0.997 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
7. ptp4a3 ENSDARG00000039997 1964 1.803 - 0.817 - - - - 0.986 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
8. auh ENSDARG00000042975 1841 1.778 - 0.798 - - - - 0.980 - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
9. IGSF8 ENSDARG00000038467 2102 1.772 - 0.774 - - - - 0.998 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
10. arrb2b ENSDARG00000011545 3126 1.77 - - - - 0.807 - 0.963 - - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
11. hfe2 4113 1.767 - 0.776 - - - - 0.991 - - hemochromatosis type 2
12. C25H12orf73 C25H12orf73 2031 1.762 0.906 0.856 - - - - - - -
13. rspry1 ENSDARG00000062558 1424 1.762 0.922 0.840 - - - - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
14. ubald1a_1 ENSDARG00000002362 401 1.758 - 0.761 - - - - 0.997 - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
15. utp3 ENSDARG00000056720 922 1.754 0.901 - - - 0.853 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
16. anxa4 ENSDARG00000036456 3332 1.73 - - - - 0.836 - 0.894 - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
17. ppm1ab ENSDARG00000043250 772 1.727 - - - 0.731 - - 0.996 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
18. phax ENSDARG00000044298 2302 1.716 - 0.723 - - - - 0.993 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
19. arfrp1 ENSDARG00000057857 2840 1.714 0.932 - - - 0.782 - - - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
20. rassf10a 417 1.713 0.845 - - - 0.868 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
21. timeless ENSDARG00000078497 1114 1.713 - 0.715 - - - - 0.998 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
22. gnl3 ENSDARG00000006219 3854 1.709 - 0.715 - - - - 0.994 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
23. src ENSDARG00000008107 3643 1.706 - - - - 0.720 - 0.986 - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
24. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.705 0.884 - - - 0.821 - - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
25. casc4 ENSDARG00000074490 2019 1.701 - 0.712 - - - - 0.989 - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
26. pho ENSDARG00000035133 670 1.693 0.950 - - 0.743 - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
27. gpx7 ENSDARG00000091511 3045 1.691 0.924 0.767 - - - - - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
28. ccnb1 ENSDARG00000051923 3226 1.69 - - - - 0.856 - 0.834 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
29. rcn1 ENSDARG00000070006 8455 1.685 - - - - 0.788 - 0.897 - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
30. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.685 - 0.701 - - - - 0.984 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
31. mrpl27 ENSDARG00000032985 2158 1.683 - 0.854 - - 0.829 - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
32. arhgef1b ENSDARG00000055837 2330 1.674 0.844 - - - 0.830 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
33. ddx49 ENSDARG00000012899 1604 1.653 0.813 - - - 0.840 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
34. pmela ENSDARG00000091298 5179 1.651 0.895 - - - 0.756 - - - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
35. bc2 5213 1.65 0.727 - - - - - 0.923 - - putative breast adenocarcinoma marker
36. ehd3 ENSDARG00000007869 3238 1.649 0.851 - - - 0.798 - - - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
37. nle1 ENSDARG00000057105 522 1.649 0.948 - - 0.701 - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
38. zgc:158564 ENSDARG00000052244 954 1.64 0.782 0.858 - - - - - - - zgc:158564 [Source:ZFIN;Acc:ZDB-GENE-070112-1662]
39. cds2 ENSDARG00000035577 1475 1.629 0.838 0.791 - - - - - - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-4]
40. CNOT4_1 CNOT4_1 697 1.618 0.915 0.703 - - - - - - -
41. lap3 ENSDARG00000061981 1188 1.617 0.908 0.709 - - - - - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
42. gpr161 ENSDARG00000055659 454 1.611 - - - 0.745 0.866 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
43. efr3bb 1533 1.607 0.906 0.701 - - - - - - - EFR3 homolog Bb (S. cerevisiae), transcript variant X2
44. trim55b ENSDARG00000058158 586 1.598 0.889 0.709 - - - - - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
45. flot2a ENSDARG00000004830 5276 1.592 0.837 - - - 0.755 - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
46. ranbp1 ENSDARG00000014817 3371 1.592 0.769 - - - 0.823 - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
47. fbxo5 ENSDARG00000039020 1284 1.587 0.828 0.759 - - - - - - - F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
48. brd8 ENSDARG00000025071 2605 1.574 - 0.759 - - 0.815 - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
49. si:dkey-25o16.2 1990 1.566 - 0.749 - - 0.817 - - - - si:dkey-25o16.2, transcript variant X1
50. etfdh ENSDARG00000038834 1811 1.557 0.840 0.717 - - - - - - - electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
51. fkbp7 ENSDARG00000010962 2986 1.551 0.763 - - - 0.788 - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
52. hps3 ENSDARG00000015749 481 1.546 0.838 0.708 - - - - - - - Hermansky-Pudlak syndrome 3 [Source:ZFIN;Acc:ZDB-GENE-061110-115]
53. cdkn2aipnl ENSDARG00000053395 5107 1.53 - 0.742 - - 0.788 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
54. gstz1 ENSDARG00000027984 278 1.524 - - - 0.729 - 0.795 - - - glutathione S-transferase zeta 1 [Source:ZFIN;Acc:ZDB-GENE-040718-184]
55. arpc4 ENSDARG00000054063 6150 1.506 - - - - 0.735 - 0.771 - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
56. AREL1 ENSDARG00000100359 260 1.505 - 0.785 - - - 0.720 - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
57. zgc:123105 ENSDARG00000003127 3061 1.502 0.727 0.775 - - - - - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
58. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 1.438 - 0.732 - - - 0.706 - - - KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
59. rpa2 ENSDARG00000037188 4284 1.434 - 0.722 - - 0.712 - - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
60. eif2s3 ENSDARG00000008292 17051 1.43 - 0.705 - - - - 0.725 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
61. itsn2a ENSDARG00000000161 115 0.999 - - - - - - 0.999 - - intersectin 2a [Source:ZFIN;Acc:ZDB-GENE-041014-84]
62. magixa ENSDARG00000025108 561 0.999 - - - - - - 0.999 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
63. cryba1b ENSDARG00000053875 3256 0.999 - - - - - - 0.999 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
64. acad11 ENSDARG00000045411 350 0.999 - - - - - - 0.999 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
65. mpeg1 mpeg1 123 0.999 - - - - - - 0.999 - -
66. ankrd6b ENSDARG00000029370 429 0.999 - - - - - - 0.999 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
67. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.999 - - - - - - 0.999 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
68. rtdr1 rtdr1 158 0.999 - - - - - - 0.999 - -
69. ENSDARG00000078787 ENSDARG00000078787 97 0.999 - - - - - - 0.999 - -
70. gnpat ENSDARG00000074401 479 0.999 - - - - - - 0.999 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
71. CU019646.2 CU019646.2 519 0.999 - - - - - - 0.999 - -
72. mapk15 ENSDARG00000100822 157 0.998 - - - - - - 0.998 - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
73. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.998 - - - - - - 0.998 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
74. AL954146.1 ENSDARG00000038891 114 0.998 - - - - - - 0.998 - - trypsin I-P1-like [Source:NCBI gene;Acc:560023]
75. ptk6a ENSDARG00000017947 682 0.998 - - - - - - 0.998 - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
76. CABZ01115256.1 CABZ01115256.1 683 0.998 - - - - - - 0.998 - -
77. CABZ01078431.1 CABZ01078431.1 183 0.998 - - - - - - 0.998 - -
78. cap1 ENSDARG00000016350 891 0.998 - - - - - - 0.998 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
79. ipmkb ENSDARG00000029291 625 0.998 - - - - - - 0.998 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
80. ncoa6 ENSDARG00000071272 759 0.998 - - - - - - 0.998 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
81. PDE3B ENSDARG00000062190 372 0.998 - - - - - - 0.998 - - phosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]
82. crb3b ENSDARG00000068182 683 0.998 - - - - - - 0.998 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
83. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 0.998 - - - - - - 0.998 - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
84. tmem104 ENSDARG00000088560 859 0.998 - - - - - - 0.998 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
85. znf451 ENSDARG00000076939 508 0.998 - - - - - - 0.998 - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
86. ino80c ENSDARG00000055719 1512 0.998 - - - - - - 0.998 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
87. fam102ba ENSDARG00000053104 845 0.998 - - - - - - 0.998 - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
88. RAB38 122 0.998 - - - - - - 0.998 - - RAB38, member RAS oncogene family
89. slc35b1 ENSDARG00000038213 465 0.998 - - - - - - 0.998 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
90. TPGS1 TPGS1 228 0.998 - - - - - - 0.998 - -
91. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.998 - - - - - - 0.998 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
92. C2H6orf52 C2H6orf52 2847 0.997 - - - - - - 0.997 - -
93. si:ch211-13c6.2 ENSDARG00000027738 1521 0.997 - - - - - - 0.997 - - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
94. pcyt2 ENSDARG00000043003 3506 0.997 - - - - - - 0.997 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
95. nlk1 ENSDARG00000006566 1123 0.997 - - - - - - 0.997 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
96. med14 ENSDARG00000009953 1383 0.997 - - - - - - 0.997 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
97. thbs4a ENSDARG00000102777 625 0.997 - - - - - - 0.997 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
98. SLC24A2 ENSDARG00000042988 242 0.997 - - - - - - 0.997 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
99. trappc3 ENSDARG00000045364 1021 0.997 - - - - - - 0.997 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
100. hiat1a ENSDARG00000013117 607 0.997 - - - - - - 0.997 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]

There are 1217 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA