Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrp36

Gene Name Gene ID Reads Annotation
rrp36 ENSDARG00000032516, ENSDARG00000109916 916 ribosomal RNA processing 36 [Source:ZFIN;Acc:ZDB-GENE-030131-9751]










Genes with expression patterns similar to rrp36

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrp36 ENSDARG00000032516, ENSDARG00000109916 916 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 36 [Source:ZFIN;Acc:ZDB-GENE-030131-9751]
2. srxn1 ENSDARG00000079160 265 1.575 - - - - - 0.800 0.775 - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
3. CREB3L4 1085 1.512 - - - - - 0.714 0.798 - - cAMP responsive element binding protein 3-like 4
4. dpf3 ENSDARG00000025309 1376 1.509 - 0.790 - - - 0.719 - - - D4, zinc and double PHD fingers, family 3 [Source:ZFIN;Acc:ZDB-GENE-041014-190]
5. heg heg 559 1.505 - 0.782 - - - - 0.723 - -
6. parn ENSDARG00000102634 2049 1.491 - 0.707 - - - - 0.784 - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
7. si:ch73-127m5.2 ENSDARG00000096797 429 1.484 - 0.707 - - - 0.777 - - - si:ch73-127m5.2 [Source:ZFIN;Acc:ZDB-GENE-030131-1052]
8. KBTBD2 ENSDARG00000087226 707 1.469 - - - - - 0.702 0.767 - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
9. xrn1 ENSDARG00000091652 2864 1.466 0.705 - - - - - 0.761 - - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
10. apip ENSDARG00000003132 1212 1.446 - - - - - 0.701 0.745 - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
11. brd7 ENSDARG00000008380 3654 1.443 - 0.723 - - - 0.720 - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
12. homer3 homer3 1974 1.437 - 0.728 - 0.709 - - - - -
13. si:ch73-280o22.2 ENSDARG00000077072 67 1.436 - - - - - 0.721 0.715 - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
14. BX571811.2 ENSDARG00000105655 11 1.414 - - - - - 0.713 0.701 - -
15. ecsit ENSDARG00000062834 896 1.406 - 0.704 - - - - 0.702 - - ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
16. ABCC6_1 ABCC6_1 403 0.925 - - - - - - 0.925 - -
17. vsig8b ENSDARG00000013685 246 0.903 - - - - - - 0.903 - - V-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
18. cdon ENSDARG00000061328 1441 0.885 - 0.885 - - - - - - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
19. AKAP12 AKAP12 140 0.883 - - - - - - 0.883 - -
20. ano9a ENSDARG00000076320, ENSDARG00000078941 865 0.878 - - - - - - 0.878 - - anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
21. si:dkey-117m1.3 si:dkey-117m1.3 154 0.877 - - - - - - 0.877 - -
22. FRMD5_1 ENSDARG00000075942 883 0.877 - 0.877 - - - - - - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
23. akap1b ENSDARG00000006062 4214 0.876 - 0.876 - - - - - - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
24. zgc:111983 ENSDARG00000006588 671 0.874 - - - - - - 0.874 - - zgc:111983 [Source:ZFIN;Acc:ZDB-GENE-050417-335]
25. noxo1a ENSDARG00000041294 440 0.873 - - - - - - 0.873 - - NADPH oxidase organizer 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9700]
26. emx3 ENSDARG00000020417 85 0.872 - - - - - - 0.872 - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
27. NEK3 ENSDARG00000058869 55 0.87 - - - - - 0.870 - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
28. g3bp2 ENSDARG00000014790 257 0.863 - - - - - - 0.863 - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
29. inhbaa ENSDARG00000012671 207 0.861 - - - - - - 0.861 - - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
30. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 0.86 - 0.860 - - - - - - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
31. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 0.86 - - - - - - 0.860 - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
32. fam63a 381 0.858 - - - - - 0.858 - - - family with sequence similarity 63, member A, transcript variant X1
33. VPS16 ENSDARG00000059902, ENSDARG00000109363 423 0.857 - - - - - 0.857 - - - vacuolar protein sorting protein 16 [Source:ZFIN;Acc:ZDB-GENE-050809-9]
34. cdkn1ba ENSDARG00000029018 1431 0.857 - - - - - - 0.857 - - cyclin-dependent kinase inhibitor 1Ba [Source:ZFIN;Acc:ZDB-GENE-040812-3]
35. tgm5l ENSDARG00000098837 174 0.857 - - - - - 0.857 - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
36. abca3b ENSDARG00000100524 2416 0.854 - - - - - - 0.854 - - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
37. yipf5 ENSDARG00000007279 2334 0.852 - - - - - - 0.852 - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
38. msto1 ENSDARG00000024381 298 0.852 - - - - - 0.852 - - - misato 1, mitochondrial distribution and morphology regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6238]
39. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.85 - 0.850 - - - - - - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
40. zgc:113452 ENSDARG00000074146 759 0.849 - - - - - 0.849 - - - zgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
41. CABZ01088149.1 ENSDARG00000114019 530 0.848 - - - - - - 0.848 - - mitochondrial ubiquitin ligase activator of nfkb 1-A [Source:NCBI gene;Acc:402879]
42. lrrc8a lrrc8a 674 0.847 - 0.847 - - - - - - -
43. tshz3a ENSDARG00000087394 2455 0.847 - - - - - - 0.847 - - teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
44. SNAP23 SNAP23 270 0.845 - - - - - - 0.845 - -
45. wbp11 ENSDARG00000099151, ENSDARG00000101411 567 0.839 - - - - - 0.839 - - - WW domain binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-040426-1829]
46. mrps9 ENSDARG00000061505 1636 0.839 - 0.839 - - - - - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
47. nars ENSDARG00000061100 2948 0.838 - 0.838 - - - - - - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
48. il17rd ENSDARG00000098359 1153 0.838 - - - - - - 0.838 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
49. ddx39b ENSDARG00000036069 1151 0.837 - - - - - 0.837 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]
50. wnk1b ENSDARG00000039392 3587 0.837 - 0.837 - - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
51. spg11 ENSDARG00000045968 542 0.836 - - - - - - 0.836 - - spastic paraplegia 11 [Source:ZFIN;Acc:ZDB-GENE-101017-1]
52. dennd5a ENSDARG00000017006 3426 0.833 - 0.833 - - - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
53. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 0.833 - - - - - 0.833 - - - heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
54. zgc:66448 ENSDARG00000022952 1045 0.832 - 0.832 - - - - - - - zgc:66448 [Source:ZFIN;Acc:ZDB-GENE-030131-5612]
55. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.832 - - - - - 0.832 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
56. trmt1l ENSDARG00000042057 466 0.83 - - - - - - 0.830 - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
57. pigo ENSDARG00000011743 928 0.829 - - - - - 0.829 - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
58. MAPRE2 ENSDARG00000099943 3041 0.827 - 0.827 - - - - - - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
59. rhbdd1 ENSDARG00000021046 120 0.826 - - - - - 0.826 - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
60. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 0.826 - 0.826 - - - - - - - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
61. esyt1a ENSDARG00000034714 129 0.826 - - - - - 0.826 - - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
62. rin1a ENSDARG00000079095 99 0.826 - - - - - 0.826 - - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
63. ano10b ENSDARG00000018159 535 0.826 - - - - - - 0.826 - - anoctamin 10b [Source:ZFIN;Acc:ZDB-GENE-061013-169]
64. b3gnt3.4 ENSDARG00000058100 117 0.825 - - - - - 0.825 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
65. fastkd2 ENSDARG00000074031 748 0.824 - 0.824 - - - - - - - FAST kinase domains 2 [Source:ZFIN;Acc:ZDB-GENE-090313-7]
66. IER2 IER2 604 0.824 - - - - - 0.824 - - -
67. STARD10 ENSDARG00000097718 181 0.824 - - - - - - 0.824 - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
68. ppm1e ENSDARG00000026499 770 0.824 - 0.824 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1E [Source:ZFIN;Acc:ZDB-GENE-070326-2]
69. NAALAD2 ENSDARG00000021383 704 0.823 - - - - - - 0.823 - - N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
70. soat2 ENSDARG00000059824 62 0.822 - - - - - 0.822 - - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
71. C22H6orf89 C22H6orf89 1076 0.821 - - - - - 0.821 - - -
72. erf ENSDARG00000063417 1053 0.821 - - - - - - 0.821 - - Ets2 repressor factor [Source:ZFIN;Acc:ZDB-GENE-010724-17]
73. auh ENSDARG00000042975 1841 0.82 - 0.820 - - - - - - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
74. myoz2b ENSDARG00000037266 2139 0.819 - 0.819 - - - - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
75. slc43a1b ENSDARG00000037748 1406 0.819 - 0.819 - - - - - - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
76. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 0.819 - 0.819 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
77. mesdc2 776 0.818 - 0.818 - - - - - - - mesoderm development candidate 2, transcript variant X2
78. wu:fc17b08 ENSDARG00000094249 427 0.818 - - - 0.818 - - - - - wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
79. CABZ01111926.1 CABZ01111926.1 249 0.818 - - - - - - 0.818 - -
80. CERS4 CERS4 319 0.817 - - - - - - 0.817 - -
81. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 0.816 - 0.816 - - - - - - - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
82. ubr5 ENSDARG00000018192 9267 0.816 - 0.816 - - - - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
83. SNORA2 SNORA2 486 0.815 - - - - - 0.815 - - -
84. gins1 ENSDARG00000007624 1421 0.815 - - - - - 0.815 - - - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
85. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 0.815 - 0.815 - - - - - - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
86. vwde ENSDARG00000103443 5758 0.815 - 0.815 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
87. hoxc6b ENSDARG00000101954 967 0.814 - 0.814 - - - - - - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
88. nras ENSDARG00000038225 450 0.814 - 0.814 - - - - - - - NRAS proto-oncogene, GTPase [Source:ZFIN;Acc:ZDB-GENE-990415-166]
89. si:dkey-266m15.6 ENSDARG00000078508 490 0.814 - - - - - - 0.814 - - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
90. zgc:113025 zgc:113025 619 0.814 - 0.814 - - - - - - -
91. BX470149.1 BX470149.1 235 0.813 - - - - - - 0.813 - -
92. prdx1 ENSDARG00000058734 4582 0.813 - 0.813 - - - - - - - peroxiredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-35]
93. si:ch211-22i13.2 ENSDARG00000043485 4719 0.813 - 0.813 - - - - - - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
94. ttll4 ENSDARG00000078935 1663 0.813 - 0.813 - - - - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
95. poc1b ENSDARG00000021110, ENSDARG00000116944 254 0.812 - - - - - 0.812 - - - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
96. hoxd4a ENSDARG00000059276 1516 0.81 - 0.810 - - - - - - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
97. prlra ENSDARG00000016570 297 0.81 - - - - - - 0.810 - - prolactin receptor a [Source:ZFIN;Acc:ZDB-GENE-080103-2]
98. grb2a ENSDARG00000105276, ENSDARG00000111933, ENSDARG00000115948 1477 0.809 - 0.809 - - - - - - - growth factor receptor-bound protein 2a [Source:ZFIN;Acc:ZDB-GENE-041121-1]
99. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 0.809 - 0.809 - - - - - - - laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
100. ankrd44 ENSDARG00000026028 324 0.809 - - - - - - 0.809 - - ankyrin repeat domain 44 [Source:ZFIN;Acc:ZDB-GENE-070912-605]

There are 693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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