Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrp12

Gene Name Gene ID Reads Annotation
rrp12 ENSDARG00000022410 2236 ribosomal RNA processing 12 homolog [Source:ZFIN;Acc:ZDB-GENE-050706-182]










Genes with expression patterns similar to rrp12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrp12 ENSDARG00000022410 2236 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 12 homolog [Source:ZFIN;Acc:ZDB-GENE-050706-182]
2. myod1 ENSDARG00000030110 6019 2.35 - 0.819 - - - 0.726 0.805 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
3. gypc ENSDARG00000041546 1487 2.338 - 0.767 - - - 0.755 0.816 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
4. cmya5 ENSDARG00000061379 1423 2.259 - 0.721 - - - 0.737 0.801 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
5. hsd17b10 ENSDARG00000017781 1793 2.24 - 0.704 - - - 0.759 0.777 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
6. vars ENSDARG00000044575 1367 2.215 - 0.770 0.735 - - - 0.710 - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
7. txlnbb ENSDARG00000076241 6396 1.678 - 0.852 - - - - 0.826 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
8. PTPLA PTPLA 4044 1.669 - 0.859 - - - - 0.810 - -
9. mir133b_1 671 1.667 - 0.894 - - - - 0.773 - - microRNA 133b
10. zgc:66479 ENSDARG00000008732 3347 1.652 - 0.877 - - - - 0.775 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
11. pno1 ENSDARG00000008502 4547 1.646 - 0.782 - - - - 0.864 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
12. ntmt1 ENSDARG00000022399 5779 1.645 - 0.829 - - - - 0.816 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
13. trim55a ENSDARG00000029596 2858 1.636 - 0.826 - - - - 0.810 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
14. chrnd ENSDARG00000019342 2728 1.635 - 0.904 - - - - 0.731 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
15. larp4aa ENSDARG00000078401 2526 1.631 - 0.902 - - - 0.729 - - - La ribonucleoprotein domain family, member 4Aa [Source:ZFIN;Acc:ZDB-GENE-090313-50]
16. hadhaa ENSDARG00000057128 2179 1.616 - - - - - 0.772 0.844 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
17. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.615 - 0.837 - - - - 0.778 - -
18. fkbp1b ENSDARG00000052625 883 1.615 - - - - - 0.839 0.776 - - FK506 binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1785]
19. znf106a ENSDARG00000016651 6049 1.612 - 0.820 - - - - 0.792 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
20. znf648 ENSDARG00000104823 1918 1.608 - 0.813 - - - - 0.795 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
21. pdss1 ENSDARG00000017910 1290 1.604 - 0.783 - - - - 0.821 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
22. rp42-pen rp42-pen 3395 1.602 - 0.819 - - - - 0.783 - -
23. timm8b ENSDARG00000055708 7291 1.599 - 0.767 - - - - 0.832 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
24. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.599 - - 0.746 - - - 0.853 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
25. sh3bgr ENSDARG00000021633 3498 1.597 - 0.816 - - - - 0.781 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
26. pbxip1a ENSDARG00000071015 4960 1.597 - 0.850 - - - - 0.747 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
27. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.595 - 0.853 - - - - 0.742 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
28. hhatla ENSDARG00000039051 6598 1.594 - 0.803 - - - - 0.791 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
29. mtdhb ENSDARG00000004939 1225 1.591 - 0.790 - - - - 0.801 - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
30. jph1a ENSDARG00000058603 2852 1.591 - 0.824 - - - - 0.767 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
31. mlf1 ENSDARG00000077301 789 1.59 - 0.748 - - - - 0.842 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
32. hapln1a ENSDARG00000089769 12334 1.586 - 0.785 - - - - 0.801 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
33. pcmt ENSDARG00000015201 5132 1.583 - 0.743 - - - - 0.840 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
34. TRIM63 TRIM63 1600 1.578 - 0.808 - - - - 0.770 - -
35. fitm1 ENSDARG00000056464 1759 1.578 - 0.803 - - - - 0.775 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
36. egfl7 ENSDARG00000100657 776 1.577 - - - - - 0.852 0.725 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
37. anxa6 ENSDARG00000013335 3588 1.576 - - - - - 0.757 0.819 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
38. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.576 - - - - - 0.719 0.857 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
39. ppp1r14c ENSDARG00000077341 1587 1.575 - 0.771 - - - - 0.804 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
40. eif2b3 ENSDARG00000018106 381 1.574 - 0.776 - - - - 0.798 - - eukaryotic translation initiation factor 2B, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1039]
41. chrna1 ENSDARG00000009021 2931 1.573 - 0.794 - - - - 0.779 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
42. COL22A1 COL22A1 4473 1.572 - 0.772 - - - - 0.800 - -
43. zgc:158296 ENSDARG00000070923 3935 1.572 - 0.748 - - - - 0.824 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
44. mrps9 ENSDARG00000061505 1636 1.571 - 0.737 - - - - 0.834 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
45. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.571 - 0.860 - - - - 0.711 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
46. sptb ENSDARG00000030490 7128 1.568 - 0.838 - - - - 0.730 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
47. BX294434.1 ENSDARG00000061272 6493 1.567 - 0.781 - - - - 0.786 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
48. lpl ENSDARG00000087697 2578 1.566 - 0.804 - - - - 0.762 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
49. limch1a ENSDARG00000074275 2981 1.566 - 0.752 - - - - 0.814 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
50. pygma ENSDARG00000055518 15972 1.562 - 0.835 - - - - 0.727 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
51. casq1b ENSDARG00000018105 2643 1.562 - 0.746 - - - - 0.816 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
52. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.561 - - - - - 0.751 0.810 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
53. TMPO TMPO 3264 1.558 - 0.800 - - - - 0.758 - -
54. CR847973.1 ENSDARG00000115516 8754 1.558 - 0.835 - - - 0.723 - - -
55. nmrk2 ENSDARG00000067848 10293 1.557 - 0.838 - - - - 0.719 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
56. tns1 tns1 5891 1.555 - 0.706 - - - - 0.849 - -
57. tnw 16679 1.553 - 0.806 - - - - 0.747 - - tenascin W, transcript variant X2
58. DNAJA4 ENSDARG00000051762 5657 1.55 - 0.778 - - - - 0.772 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
59. ryr3 ENSDARG00000071331 6795 1.548 - 0.807 - - - - 0.741 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
60. xirp2a ENSDARG00000071113 7113 1.545 - 0.757 - - - - 0.788 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
61. mybphb ENSDARG00000003081 5208 1.545 - 0.829 0.716 - - - - - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
62. kcnma1a ENSDARG00000079840 2584 1.541 - 0.760 - - - - 0.781 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
63. ndufa5 ENSDARG00000039346 2617 1.541 - 0.777 - - - - 0.764 - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
64. ddx49 ENSDARG00000012899 1604 1.536 - 0.816 - - - - 0.720 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
65. ALDH1L2 ENSDARG00000070230 2550 1.536 - - 0.791 - - - 0.745 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
66. pmpca ENSDARG00000102607 1024 1.533 - 0.730 - - - - 0.803 - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
67. akap6 ENSDARG00000077295 1382 1.532 - 0.775 - - - - 0.757 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
68. eef2k ENSDARG00000035835 2906 1.531 - 0.727 - - - - 0.804 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
69. zgc:193541 ENSDARG00000092873 21276 1.53 - - - - - 0.739 0.791 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
70. klhl40a ENSDARG00000039052 2537 1.528 - 0.762 - - - - 0.766 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
71. slc43a1b ENSDARG00000037748 1406 1.527 - 0.776 - - - - 0.751 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
72. srl ENSDARG00000104587 11126 1.525 - 0.808 - - - - 0.717 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
73. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.523 - 0.782 - - - - 0.741 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
74. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.522 - 0.731 - - - - 0.791 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
75. EHBP1L1 EHBP1L1 2500 1.52 - 0.752 - - - - 0.768 - -
76. rwdd1 ENSDARG00000015930 2380 1.519 - 0.808 - - - - 0.711 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
77. acsl1 acsl1 4216 1.519 - - - - - 0.732 0.787 - -
78. cacna2d1a ENSDARG00000014804 1924 1.517 - 0.760 - - - - 0.757 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
79. mt-nd4l ENSDARG00000063916 2229 1.516 - - - - - 0.746 0.770 - - NADH dehydrogenase 4L, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-11]
80. ITGB1BP2 ENSDARG00000030176 2472 1.516 - 0.712 - - - - 0.804 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
81. cspg4 ENSDARG00000078227 1084 1.516 - 0.748 0.768 - - - - - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
82. alpk2 ENSDARG00000079637 1483 1.515 - 0.734 - - - - 0.781 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
83. usp28 ENSDARG00000008880 1850 1.513 - 0.781 - - - - 0.732 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
84. cacng1 cacng1 3118 1.51 - 0.757 - - - - 0.753 - -
85. yars ENSDARG00000035913, ENSDARG00000113430 2043 1.509 - 0.798 0.711 - - - - - - tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
86. frmd6 ENSDARG00000002332 2698 1.507 - 0.765 - - - - 0.742 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
87. ryr1b ENSDARG00000023797 5693 1.505 - 0.795 - - - - 0.710 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
88. alg3 ENSDARG00000053155 1843 1.504 - 0.782 - - - - 0.722 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
89. rab5if ENSDARG00000074790 8807 1.503 - 0.726 - - - - 0.777 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
90. nars ENSDARG00000061100 2948 1.503 - 0.785 - - - - 0.718 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
91. smtnl1 ENSDARG00000041257 7410 1.498 - - - - - 0.749 0.749 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
92. rrs1 ENSDARG00000003941 1257 1.498 - 0.756 - - - 0.742 - - - RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]
93. minos1 ENSDARG00000101619 5273 1.497 - 0.720 - - - - 0.777 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
94. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.496 - 0.708 - - - - 0.788 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
95. alpk3a ENSDARG00000078989 1992 1.495 - 0.795 - - - - 0.700 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
96. MUSTN1 MUSTN1 1882 1.494 - 0.769 - - - - 0.725 - -
97. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.494 - 0.794 - - - - 0.700 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
98. NRAP ENSDARG00000009341 3565 1.492 - 0.736 - - - - 0.756 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
99. BCKDHB ENSDARG00000014676 3725 1.489 - 0.703 - - - - 0.786 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
100. tspan12 ENSDARG00000032389 419 1.485 - 0.762 - - - - 0.723 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]

There are 882 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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