Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrp1

Gene Name Gene ID Reads Annotation
rrp1 ENSDARG00000103337 2366 ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]










Genes with expression patterns similar to rrp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrp1 ENSDARG00000103337 2366 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]
2. C1QBP ENSDARG00000039887 11186 2.535 0.899 0.917 - - - - 0.719 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
3. pfn2l ENSDARG00000012682 21690 2.359 0.733 0.873 - - - - 0.753 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
4. txlnbb ENSDARG00000076241 6396 2.21 0.766 - - - - 0.739 0.705 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
5. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 1.771 - 0.997 - - - 0.774 - - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
6. rtn2a ENSDARG00000016088 12184 1.77 0.781 0.989 - - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
7. ndufa9 ndufa9 8846 1.738 - 0.989 - - - - 0.749 - -
8. polr2d ENSDARG00000076509 3386 1.719 - 0.997 - - - - 0.722 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
9. cox6c ENSDARG00000038577 16845 1.643 - 0.923 - - - - 0.720 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
10. mrpl54 ENSDARG00000071468 2715 1.589 0.735 - - - - - 0.854 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
11. flncb ENSDARG00000018820 5595 1.576 0.859 - - - - - 0.717 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
12. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.572 0.797 - - - - 0.775 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
13. cct3 ENSDARG00000016173 15869 1.555 0.771 - - - - - 0.784 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
14. CR388002.1 CR388002.1 1998 1.553 0.734 - - - - - 0.819 - -
15. arvcfb ENSDARG00000061688 2388 1.552 0.813 - - - - - 0.739 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
16. tnrc6b ENSDARG00000074161 4597 1.55 - 0.840 - - - - - - 0.710 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
17. fitm1 ENSDARG00000056464 1759 1.549 0.791 - - - - 0.758 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
18. aimp1 ENSDARG00000060036 5343 1.548 - - - - - 0.760 0.788 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
19. usp2a ENSDARG00000020107 2586 1.547 0.708 0.839 - - - - - - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
20. mrps18b ENSDARG00000007065 2121 1.545 0.773 - - - - - 0.772 - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
21. sms ENSDARG00000008155 1192 1.544 0.785 - - - - - 0.759 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
22. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.544 0.811 - - - - - 0.733 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
23. mrps2 ENSDARG00000103198 2410 1.543 0.715 - - - - - 0.828 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
24. chrna1 ENSDARG00000009021 2931 1.541 0.820 - - - - - 0.721 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
25. limch1a ENSDARG00000074275 2981 1.529 0.796 - - - - - 0.733 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
26. sdhdb ENSDARG00000030139 9761 1.528 0.749 - - - - 0.779 - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
27. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.526 0.785 - - - - - 0.741 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
28. txn2 ENSDARG00000034777 4071 1.525 0.750 - - - - - 0.775 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
29. sar1ab ENSDARG00000033320 3984 1.519 0.789 - - - - - 0.730 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
30. PTGES3L PTGES3L 4801 1.518 0.799 - - - - - 0.719 - -
31. ndufv1 ENSDARG00000036438 8437 1.517 0.741 - - - - 0.776 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
32. eif3m ENSDARG00000013931 8117 1.517 0.783 - - - - - 0.734 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
33. EIF4G1 EIF4G1 19676 1.517 0.752 0.765 - - - - - - -
34. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.515 0.750 - - - - - 0.765 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
35. sh3bgr ENSDARG00000021633 3498 1.511 0.768 - - - - 0.743 - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
36. efcab1 ENSDARG00000061377 234 1.501 - - - - - 0.774 0.727 - - EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-040914-40]
37. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.499 0.735 - - - - - 0.764 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
38. crls1 ENSDARG00000038000 1088 1.499 0.700 - - - - - 0.799 - - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
39. myoz2b ENSDARG00000037266 2139 1.494 0.729 - - - - 0.765 - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
40. hif1an ENSDARG00000031915 2098 1.491 - - - - - 0.779 0.712 - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
41. ndufb3 ENSDARG00000075709 6609 1.491 - - - - - 0.779 0.712 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
42. stip1 ENSDARG00000004906 7742 1.478 0.754 - - - - - 0.724 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
43. phb ENSDARG00000057414 9551 1.478 0.739 - - - - - 0.739 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
44. mrpl22 ENSDARG00000109961 1374 1.475 0.735 - - - - - 0.740 - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
45. naca ENSDARG00000005513 2745 1.474 0.768 - - - - - 0.706 - - nascent polypeptide associated complex subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020423-4]
46. ntmt1 ENSDARG00000022399 5779 1.474 - - - - - 0.748 0.726 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
47. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.472 0.746 - - - - - 0.726 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
48. vldlr ENSDARG00000006257 772 1.47 - - - - - - 0.758 - 0.712 very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
49. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.47 0.754 - - - - - 0.716 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
50. smyd2b ENSDARG00000005629 8181 1.47 0.744 - - - - 0.726 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
51. jam3b ENSDARG00000061794 5655 1.466 0.744 - - - - - 0.722 - - junctional adhesion molecule 3b [Source:ZFIN;Acc:ZDB-GENE-030131-441]
52. ITGB1BP2 ENSDARG00000030176 2472 1.465 0.755 - - - - - 0.710 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
53. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.458 0.711 - - - - - 0.747 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
54. rwdd1 ENSDARG00000015930 2380 1.457 0.718 - - - - - 0.739 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
55. minos1 ENSDARG00000101619 5273 1.45 0.721 - - - - - 0.729 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
56. atp5o 10343 1.45 - - - - - 0.711 0.739 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
57. PTP4A3 ENSDARG00000039997 3814 1.444 0.714 - - - - - 0.730 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
58. FNIP1 ENSDARG00000102171 1005 1.438 0.703 - - - - - 0.735 - - folliculin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3586]
59. alg3 ENSDARG00000053155 1843 1.434 - - - - - 0.709 0.725 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
60. alpk3a ENSDARG00000078989 1992 1.433 0.722 - - - - - 0.711 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
61. lsm6 ENSDARG00000036995 4377 1.43 0.702 - - - - - 0.728 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
62. mt-atp8 ENSDARG00000063910 1376 1.429 - - - - - 0.705 0.724 - - ATP synthase 8, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-19]
63. tmsb ENSDARG00000054911 6411 1.427 0.715 - - - - - 0.712 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
64. ATP5J_2 ATP5J_2 2381 1.417 0.705 - - - - - 0.712 - -
65. acsl1 acsl1 4216 1.411 - - - - - 0.707 0.704 - -
66. cox6a1 ENSDARG00000022438 18811 1.409 0.702 - - - - - 0.707 - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
67. PRODH_1 PRODH_1 3400 0.999 - 0.999 - - - - - - -
68. dnajc18 ENSDARG00000056005 8084 0.998 - 0.998 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
69. cxxc5a ENSDARG00000078865 3447 0.998 - 0.998 - - - - - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
70. PEAK1 ENSDARG00000079756 1330 0.998 - 0.998 - - - - - - - pseudopodium-enriched atypical kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100422-1]
71. agla ENSDARG00000103811 2856 0.998 - 0.998 - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
72. cdk16_1 ENSDARG00000032072 2031 0.998 - 0.998 - - - - - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
73. wdr75 ENSDARG00000040730 1247 0.998 - 0.998 - - - - - - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
74. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 0.998 - 0.998 - - - - - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
75. mettl16 ENSDARG00000055838 818 0.997 - 0.997 - - - - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
76. taf5 ENSDARG00000018325 1363 0.997 - 0.997 - - - - - - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
77. PLEKHG1 2100 0.997 - 0.997 - - - - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
78. tbl1x ENSDARG00000060438 1386 0.997 - 0.997 - - - - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
79. sipa1l2 ENSDARG00000061640 4545 0.997 - 0.997 - - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
80. CR847934.1 CR847934.1 2658 0.997 - 0.997 - - - - - - -
81. TSPY2 TSPY2 1371 0.997 - 0.997 - - - - - - -
82. uba5 ENSDARG00000063588 1260 0.997 - 0.997 - - - - - - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
83. CR352249.1 ENSDARG00000114701 857 0.997 - 0.997 - - - - - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
84. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.997 - 0.997 - - - - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
85. dnajb12b ENSDARG00000087473 3811 0.997 - 0.997 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
86. gprc5c ENSDARG00000100862 457 0.997 - 0.997 - - - - - - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
87. pard6b ENSDARG00000003865 990 0.997 - 0.997 - - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
88. C1H7orf55 C1H7orf55 2552 0.997 - 0.997 - - - - - - -
89. akr1b1 ENSDARG00000006215 2511 0.997 - 0.997 - - - - - - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
90. vash2 ENSDARG00000007774 2537 0.997 - 0.997 - - - - - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
91. frem1a ENSDARG00000069473 1847 0.997 - 0.997 - - - - - - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
92. ebna1bp2 ENSDARG00000054980 4621 0.997 - 0.997 - - - - - - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
93. SCARF2 1117 0.997 - 0.997 - - - - - - - scavenger receptor class F, member 2
94. wasf3 wasf3 3287 0.997 - 0.997 - - - - - - -
95. ACVR1B ACVR1B 4824 0.997 - 0.997 - - - - - - -
96. C4H12orf45 C4H12orf45 483 0.997 - 0.997 - - - - - - -
97. gpc4 ENSDARG00000015472 2529 0.997 - 0.997 - - - - - - - glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
98. CU019646.2 CU019646.2 519 0.997 - 0.997 - - - - - - -
99. mboat7 ENSDARG00000033436 848 0.997 - 0.997 - - - - - - - membrane bound O-acyltransferase domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1516]
100. atraid ENSDARG00000043388 648 0.996 - 0.996 - - - - - - - all-trans retinoic acid-induced differentiation factor [Source:ZFIN;Acc:ZDB-GENE-040724-177]

There are 849 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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