Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrnad1_1

Gene Name Gene ID Reads Annotation
rrnad1_1 ENSDARG00000089033 43 ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]










Genes with expression patterns similar to rrnad1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrnad1_1 ENSDARG00000089033 43 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
2. npas4a ENSDARG00000055752 5 1.764 - - 1.000 - - - 0.764 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
3. si:ch211-255g12.5 si:ch211-255g12.5 7 1.491 - - 0.727 - - - 0.764 - -
4. twsg1b 7 1 - - 1.000 - - - - - - twisted gastrulation BMP signaling modulator 1b
5. si:ch211-160j14.4 si:ch211-160j14.4 0 1 - - 1.000 - - - - - -
6. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - - 1.000 - - - - - - calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
7. fam154b fam154b 2 1 - - 1.000 - - - - - -
8. CU570981.1 CU570981.1 9 1 - - 1.000 - - - - - -
9. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - 1.000 - - - - - -
10. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - 1.000 - - - - - -
11. si:dkey-92c21.3 si:dkey-92c21.3 2 1 - - 1.000 - - - - - -
12. morc3b ENSDARG00000043271 8 1 - - 1.000 - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
13. ROBO3 ENSDARG00000005645 10 1 - - 1.000 - - - - - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
14. si:ch211-260c23.1 13 1 - - 1.000 - - - - - - si:ch211-260c23.1, transcript variant X7
15. zgc:153499 ENSDARG00000070166 8 1 - - 1.000 - - - - - - zgc:153499 [Source:ZFIN;Acc:ZDB-GENE-060825-234]
16. or131-2 ENSDARG00000073812 0 1 - - 1.000 - - - - - - odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
17. SLC4A8 ENSDARG00000015531 16 1 - - 1.000 - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
18. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - 1.000 - - - - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
19. CABZ01079442.1 CABZ01079442.1 1 1 - - 1.000 - - - - - -
20. RGS9BP ENSDARG00000086756 65 1 - - 1.000 - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
21. BX950859.2 BX950859.2 10 1 - - 1.000 - - - - - -
22. PLBD1 ENSDARG00000063313 1 1 - - 1.000 - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
23. olfm3b ENSDARG00000039174 3 1 - - 1.000 - - - - - - olfactomedin 3b [Source:ZFIN;Acc:ZDB-GENE-070912-606]
24. si:ch211-167j6.3 ENSDARG00000095504 5 1 - - 1.000 - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
25. th2 ENSDARG00000038384 1 1 - - 1.000 - - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
26. U1_46 U1_46 1 1 - - 1.000 - - - - - -
27. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1 - - 1.000 - - - - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
28. si:ch211-234c11.2 ENSDARG00000093041, ENSDARG00000109255 1 1 - - 1.000 - - - - - - si:ch211-234c11.2 [Source:ZFIN;Acc:ZDB-GENE-110914-70]
29. si:ch211-210c8.5 si:ch211-210c8.5 6 1 - - 1.000 - - - - - -
30. FETUB ENSDARG00000053973 4 1 - - 1.000 - - - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
31. PIK3R6_1 PIK3R6_1 1 1 - - 1.000 - - - - - -
32. CR848784.2 ENSDARG00000111157 16 1 - - 1.000 - - - - - -
33. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - 1.000 - - - - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
34. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - 1.000 - - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
35. GPT GPT 2 1 - - 1.000 - - - - - -
36. CU464087.2 CU464087.2 15 1 - - 1.000 - - - - - -
37. tmem176l.2 ENSDARG00000089399 22 1 - - 1.000 - - - - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
38. mamdc2a ENSDARG00000098345 21 1 - - 1.000 - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
39. myo15aa ENSDARG00000075292 29 0.95 - - - - - - 0.950 - - myosin XVAa [Source:ZFIN;Acc:ZDB-GENE-080425-2]
40. LRAT LRAT 12 0.943 - - 0.943 - - - - - -
41. crygs1 ENSDARG00000042992 45 0.939 - - - - - - 0.939 - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
42. angptl1 angptl1 82 0.939 - - - - - - 0.939 - -
43. ift81 ENSDARG00000007444 97 0.934 - - - - - - 0.934 - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]
44. opn3 ENSDARG00000052775 8 0.929 - - 0.929 - - - - - - opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16]
45. lmo1 ENSDARG00000034504 260 0.917 - - - - - - 0.917 - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
46. nos1apb ENSDARG00000058701 148 0.915 - - - - - - 0.915 - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
47. blf ENSDARG00000043126 433 0.905 - - - - - - 0.905 - - bloody fingers [Source:ZFIN;Acc:ZDB-GENE-050721-1]
48. si:ch211-142h2.1 si:ch211-142h2.1 11 0.903 - - 0.903 - - - - - -
49. GPR45 ENSDARG00000063357 57 0.892 - - - - - - 0.892 - - G protein-coupled receptor 45 [Source:HGNC Symbol;Acc:HGNC:4503]
50. fam166b ENSDARG00000100292 14 0.892 - - - - - - 0.892 - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
51. CABZ01030107.1 ENSDARG00000058631 52 0.886 - - - - - - 0.886 - -
52. CT573433.2 CT573433.2 115 0.886 - - - - - - 0.886 - -
53. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 0.88 - - - - - - 0.880 - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
54. CR854899.1 ENSDARG00000102357 8 0.871 - - 0.871 - - - - - -
55. TTYH1 ENSDARG00000076804 399 0.869 - - - - - - 0.869 - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
56. si:ch211-229d2.5 ENSDARG00000079119 95 0.866 - - 0.866 - - - - - - si:ch211-229d2.5 [Source:ZFIN;Acc:ZDB-GENE-121214-200]
57. si:dkeyp-109b10.4 si:dkeyp-109b10.4 23 0.858 - - 0.858 - - - - - -
58. vstm2l ENSDARG00000098289 19 0.852 - - - - - - 0.852 - - V-set and transmembrane domain containing 2 like [Source:ZFIN;Acc:ZDB-GENE-040426-1548]
59. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 0.852 - - - - - - 0.852 - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
60. ANO8 ANO8 380 0.843 - - - - - - 0.843 - -
61. gpr155b ENSDARG00000071086 54 0.83 - - - - - - 0.830 - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
62. nek2 ENSDARG00000005619 273 0.828 - - - - - - 0.828 - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
63. mhc1zea ENSDARG00000001470 184 0.822 - - - - - - 0.822 - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
64. tmlhe ENSDARG00000077547 301 0.821 - - - - - - 0.821 - - trimethyllysine hydroxylase, epsilon [Source:ZFIN;Acc:ZDB-GENE-091204-144]
65. zgc:174708 zgc:174708 11 0.82 - - 0.820 - - - - - -
66. CABZ01069020.1 ENSDARG00000105806 19 0.82 - - 0.820 - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
67. BX465848.2 ENSDARG00000116920 6 0.82 - - 0.820 - - - - - -
68. CTTNBP2NL CTTNBP2NL 260 0.82 - - - - - - 0.820 - -
69. CU183952.2 CU183952.2 6 0.82 - - 0.820 - - - - - -
70. si:dkey-183p4.10 ENSDARG00000077907 5 0.82 - - 0.820 - - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
71. pnocb ENSDARG00000024189 18 0.82 - - 0.820 - - - - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
72. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.82 - - 0.820 - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
73. gper gper 4 0.82 - - 0.820 - - - - - -
74. LECT2 LECT2 4 0.82 - - 0.820 - - - - - -
75. CABZ01072950.1 ENSDARG00000114879 2 0.82 - - 0.820 - - - - - -
76. ARX ARX 71 0.818 - - - - - - 0.818 - -
77. ak8 ENSDARG00000030961, ENSDARG00000113361, ENSDARG00000116619 50 0.818 - - - - - - 0.818 - - adenylate kinase 8 [Source:ZFIN;Acc:ZDB-GENE-050522-275]
78. C22H19orf26 C22H19orf26 66 0.818 - - - - - - 0.818 - -
79. slitrk2 ENSDARG00000006636 40 0.818 - - - - - - 0.818 - - SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
80. si:ch211-26b3.4 ENSDARG00000075491 50 0.818 - - - - - - 0.818 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
81. fam57ba ENSDARG00000026875 504 0.815 - - - - - - 0.815 - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
82. six4b ENSDARG00000031983 265 0.809 - - - - - - 0.809 - - SIX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-010201-1]
83. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.809 - - - - - - 0.809 - - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
84. PSMG4 1007 0.808 - - - - - - 0.808 - - proteasome (prosome, macropain) assembly chaperone 4
85. chrna6 ENSDARG00000055559 60 0.798 - - - - - - 0.798 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
86. CU467824.1 CU467824.1 76 0.795 - - - - - - 0.795 - -
87. ccdc78 ENSDARG00000030095 8 0.793 - - 0.793 - - - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
88. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 0.793 - - 0.793 - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
89. INSM2 ENSDARG00000020655 122 0.792 - - - - - - 0.792 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
90. TMEM100_1 TMEM100_1 44 0.792 - - - - - - 0.792 - -
91. si:ch211-117c9.5 ENSDARG00000071235 154 0.792 - - - - - - 0.792 - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
92. pth1a ENSDARG00000093738 106 0.789 - - - - - - 0.789 - - parathyroid hormone 1a [Source:ZFIN;Acc:ZDB-GENE-040623-1]
93. TULP1_1 TULP1_1 260 0.788 - - - - - - 0.788 - -
94. EFNA2 EFNA2 640 0.787 - - - - - - 0.787 - -
95. UNC13C 119 0.784 - - - - - - 0.784 - - unc-13 homolog C (C. elegans)
96. si:dkey-25i10.5 si:dkey-25i10.5 18 0.779 - - 0.779 - - - - - -
97. zufsp ENSDARG00000059983 261 0.779 - - - - - - 0.779 - - zinc finger containing ubiquitin peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-070209-211]
98. si:dkey-240n22.8 ENSDARG00000096001 37 0.778 - - - - - - 0.778 - - si:dkey-240n22.8 [Source:ZFIN;Acc:ZDB-GENE-110914-150]
99. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 0.778 - - - - - - 0.778 - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
100. gfra3 ENSDARG00000087704 122 0.778 - - - - - - 0.778 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]

There are 262 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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