Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrm2_1

Gene Name Gene ID Reads Annotation
rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]










Genes with expression patterns similar to rrm2_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
2. cdc14b ENSDARG00000021483 4958 3.535 - 0.977 - 0.984 0.772 - 0.802 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
3. notch3 ENSDARG00000052139 15033 2.658 0.802 0.959 - - - - 0.897 - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
4. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.63 - - - 0.992 0.868 - - - 0.770 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
5. ppp3r1a ENSDARG00000092659 9729 2.522 - 0.879 - - - 0.723 0.920 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
6. safb ENSDARG00000020467 5608 2.503 - - - - - 0.902 0.879 - 0.722 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
7. zgc:101569 ENSDARG00000038876 1525 2.496 - 0.979 - - - 0.743 - 0.774 - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
8. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 2.458 - - 0.743 0.988 - 0.727 - - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
9. sox3 ENSDARG00000053569 12016 2.445 - - 0.735 - - - 0.885 - 0.825 SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
10. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 2.426 - - - - - 0.858 0.784 0.784 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
11. stmn1a ENSDARG00000004169 21169 2.366 - - 0.809 - 0.836 - - - 0.721 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
12. snrnp70 ENSDARG00000077126 5921 2.3 - - - - 0.761 - 0.794 - 0.745 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
13. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.3 - - 0.760 - - - 0.823 - 0.717 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
14. tmpob ENSDARG00000022978 8121 2.282 - - 0.781 - - 0.701 - - 0.800 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
15. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.26 - - 0.728 - 0.818 - - - 0.714 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
16. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 2.241 - - 0.723 - - - 0.784 - 0.734 DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
17. atl3 ENSDARG00000004270 2806 2.19 - - - - - 0.737 0.706 0.747 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
18. nkx6.2 ENSDARG00000104735 5081 1.847 - 0.977 - 0.870 - - - - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
19. ywhah ENSDARG00000005560 11079 1.847 - - - 0.984 - - 0.863 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
20. gng5 ENSDARG00000039830 12102 1.846 - 0.916 - 0.930 - - - - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
21. cdc42 ENSDARG00000044573 11795 1.798 - - - 0.985 - - 0.813 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
22. tbc1d17 ENSDARG00000005927 1769 1.797 - 0.977 - - - 0.820 - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
23. cdkn1c cdkn1c 17427 1.79 - 0.895 - - - - - 0.895 -
24. CABZ01111990.1 CABZ01111990.1 4374 1.783 - - - 0.988 - - - - 0.795
25. ranbp1 ENSDARG00000014817 3371 1.779 - - 0.794 0.985 - - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
26. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.773 - - - 0.985 - 0.788 - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
27. CWC15 ENSDARG00000013382 8969 1.773 - - - 0.980 0.793 - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
28. zgc:63587 ENSDARG00000017140 8399 1.769 - - - 0.984 - - 0.785 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
29. wu:fc51f04 wu:fc51f04 7074 1.766 - - - - - - 0.918 - 0.848
30. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.766 - 0.969 - - - - 0.797 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
31. C19H1orf85 C19H1orf85 1587 1.762 - 0.979 - - - - - 0.783 -
32. rbb4 rbb4 15541 1.753 - - 0.915 - - - - - 0.838
33. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.749 - 0.959 0.790 - - - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
34. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.741 - - - 0.986 0.755 - - - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
35. tpd52l2b ENSDARG00000013655 9460 1.726 - - - 0.980 - - 0.746 - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
36. epn2 ENSDARG00000008377 5458 1.722 - 0.880 - - - 0.842 - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
37. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.714 - 0.947 - - - - - 0.767 - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
38. FP016176.1 FP016176.1 7030 1.71 - - - 0.991 - - - - 0.719
39. kpna2 ENSDARG00000038066 7954 1.704 - 0.966 - - - - - - 0.738 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
40. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.698 - 0.934 - - - - - - 0.764 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
41. erh ENSDARG00000032866 20633 1.692 - - - - - 0.831 0.861 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
42. sf3a1 ENSDARG00000041887 6702 1.691 - - - 0.985 0.706 - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
43. trpc4apa ENSDARG00000018840 2543 1.69 - 0.972 - - - 0.718 - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
44. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.686 - 0.983 0.703 - - - - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
45. PELP1 ENSDARG00000079313 5771 1.682 - 0.947 - - - 0.735 - - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
46. rtn3_1 ENSDARG00000091348 3290 1.676 - 0.974 - - 0.702 - - - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
47. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.67 - 0.931 - - - - - 0.739 - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
48. SRGAP3 ENSDARG00000060309 5353 1.669 - 0.935 - - - 0.734 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
49. znf385a ENSDARG00000009899 3433 1.664 - 0.957 - - - - 0.707 - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
50. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.659 - - 0.828 - - - 0.831 - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
51. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.653 - 0.944 - - - - - - 0.709 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
52. tfam ENSDARG00000063145 4524 1.652 - - - - - 0.808 0.844 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
53. SNRPG ENSDARG00000099667 18697 1.651 - - - - - - - 0.877 0.774 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
54. slbp ENSDARG00000100558 3405 1.648 - - 0.830 - - - - - 0.818 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
55. nfe2l3 ENSDARG00000019810 3682 1.639 - - 0.767 - - 0.872 - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
56. srsf2a ENSDARG00000057484 25721 1.632 - - - - - - 0.901 - 0.731 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
57. ftr82 ENSDARG00000055647 3302 1.627 - 0.917 - - 0.710 - - - - finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
58. mdkb ENSDARG00000020708 5393 1.627 - - - - 0.839 - - - 0.788 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
59. psma3 ENSDARG00000086618 6200 1.625 - - - - - - 0.871 - 0.754 proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
60. srsf3b ENSDARG00000059360 14888 1.623 - - - - - - 0.860 - 0.763 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
61. tmed4 ENSDARG00000024954 3476 1.62 - - - - - 0.870 0.750 - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
62. snrpd1 ENSDARG00000011648 8615 1.611 - - 0.772 - - - 0.839 - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
63. smarca5 ENSDARG00000052348 15433 1.609 - - - 0.746 - - - - 0.863 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
64. psmb6 ENSDARG00000002240 8015 1.607 - - - - - 0.822 - - 0.785 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
65. abcf1 ENSDARG00000031795 8635 1.606 - 0.860 - - - - - - 0.746 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
66. tyms ENSDARG00000042894 3068 1.598 - - - - 0.783 - 0.815 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
67. plxnb1b ENSDARG00000017211 4676 1.597 - - - - 0.784 0.813 - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
68. khsrp ENSDARG00000026489 15738 1.597 - - - - 0.766 - - - 0.831 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
69. ubc ENSDARG00000102632 36050 1.593 - - - - 0.764 0.829 - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
70. ylpm1 ENSDARG00000043680 7676 1.591 - - 0.720 - - - - 0.871 - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
71. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.589 - - 0.743 - 0.846 - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
72. uhrf1 ENSDARG00000103409 3282 1.587 - - - - - - 0.796 - 0.791 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
73. ppiab ENSDARG00000103994 47491 1.587 - - - - 0.774 - 0.813 - - peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
74. wtap ENSDARG00000042642 1779 1.587 - - - - - 0.825 0.762 - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
75. CR936437.1 CR936437.1 6465 1.586 - - 0.786 - - - - - 0.800
76. smc1al ENSDARG00000058203 8838 1.584 - - - - 0.850 - - - 0.734 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
77. pvrl1b 1645 1.58 - - - - - 0.806 - 0.774 - poliovirus receptor-related 1b
78. hnrpl 6412 1.58 - - 0.705 - - - - - 0.875 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
79. brd1b ENSDARG00000051798 1712 1.58 - - - - - 0.785 - 0.795 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
80. cdc34b ENSDARG00000012627 3879 1.578 - - - - - 0.830 - - 0.748 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
81. gmps ENSDARG00000079848 8217 1.578 - 0.826 - - - - 0.752 - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
82. ZNF281 ZNF281 1946 1.575 - - 0.711 - - 0.864 - - -
83. ccnb1 ENSDARG00000051923 3226 1.574 - - 0.729 - - 0.845 - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
84. kansl3 ENSDARG00000029556 2487 1.572 - - - - 0.778 - 0.794 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
85. ncalda ENSDARG00000070688 5069 1.571 - - - - - 0.812 - - 0.759 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
86. gbas gbas 735 1.571 - - - - - 0.817 0.754 - -
87. si:ch211-22i13.2 ENSDARG00000043485 4719 1.568 - - - - 0.760 - 0.808 - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
88. alyref ENSDARG00000077732 25934 1.568 - 0.720 - - - - - 0.848 - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
89. klc2 3058 1.567 - - - - 0.765 - 0.802 - - kinesin light chain 2
90. msi1 ENSDARG00000010710 2634 1.563 - - 0.769 - - - - - 0.794 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
91. nhp2l1b nhp2l1b 3898 1.562 - - - - 0.783 0.779 - - -
92. lmnb2 ENSDARG00000101624 11304 1.561 - - - - - - 0.734 - 0.827 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
93. zgc:56493 ENSDARG00000031435 33407 1.558 - - - - - 0.808 - - 0.750 zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
94. rap1b ENSDARG00000008867 7915 1.558 - 0.789 - - - - 0.769 - - RAP1B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9662]
95. rbb4l ENSDARG00000015208 5542 1.556 0.722 - 0.834 - - - - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
96. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.556 - - - - - - 0.741 0.815 - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
97. ezh2 ENSDARG00000010571 3273 1.556 - - 0.833 - - - - - 0.723 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
98. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.555 - - 0.714 - - - - - 0.841 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
99. purba ENSDARG00000068822 2537 1.551 - - - - - 0.758 0.793 - - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
100. TMEM184B TMEM184B 1280 1.548 - - - - - 0.794 0.754 - -

There are 1657 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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