Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rrm2

Gene Name Gene ID Reads Annotation
rrm2 ENSDARG00000020711, ENSDARG00000078069 1280 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]










Genes with expression patterns similar to rrm2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrm2 ENSDARG00000020711, ENSDARG00000078069 1280 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
2. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.45 - 0.939 - - - - 0.713 - 0.798 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
3. zgc:158463_1 ENSDARG00000089382 23 1.87 0.947 - - - - - 0.923 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
4. si:ch73-91k6.1 18 1.824 0.901 - - - - - 0.923 - - si:ch73-91k6.1
5. si:dkey-262g12.4 si:dkey-262g12.4 144 1.813 0.868 0.945 - - - - - - -
6. gfm2 ENSDARG00000005561 302 1.797 0.855 0.942 - - - - - - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
7. nefla ENSDARG00000057568 62 1.795 0.901 - - - - - 0.894 - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
8. srsf11 ENSDARG00000098574 12801 1.773 - 0.893 - - - - - - 0.880 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
9. ANKRD13D ENSDARG00000098140 88 1.77 - - - - 0.917 - 0.853 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
10. her2 ENSDARG00000038205 3219 1.74 - 0.942 - - - - 0.798 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
11. fmnl2b ENSDARG00000075041 1744 1.722 - 0.943 - - - - 0.779 - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
12. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.693 - 0.939 - - - - - - 0.754 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
13. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.688 - - - - - - 0.884 - 0.804 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
14. prdm14 ENSDARG00000045371 106 1.666 - - - - 0.743 - 0.923 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
15. CHL1 CHL1 1553 1.665 - - - - 0.804 - 0.861 - -
16. magi1a ENSDARG00000070145 547 1.659 0.803 - - - - - 0.856 - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
17. alg2 ENSDARG00000070399 772 1.651 0.839 - - - 0.812 - - - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
18. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.643 - - - - - - 0.906 - 0.737 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
19. lrrtm1 ENSDARG00000052713 1041 1.639 - - - - 0.828 - 0.811 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
20. PHYHIP ENSDARG00000116497 456 1.633 - - - - 0.789 - 0.844 - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
21. nova2 ENSDARG00000017673 7685 1.626 - - - - - - 0.761 - 0.865 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
22. zgc:110425 ENSDARG00000058479 5216 1.625 - 0.903 - - - - - - 0.722 zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
23. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.622 - 0.866 - - - - - - 0.756 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
24. tuba1c ENSDARG00000055216 8384 1.619 - - - - - - 0.815 - 0.804 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
25. myt1b ENSDARG00000102879 5411 1.605 - - - - - - 0.815 - 0.790 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
26. gnao1a ENSDARG00000016676 8184 1.6 - - - - - - 0.815 - 0.785 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
27. stmn1b ENSDARG00000033655 9491 1.6 - - - - - - 0.808 - 0.792 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
28. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.593 - 0.803 - - - - - - 0.790 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
29. kcnj11l ENSDARG00000031438 369 1.592 - - - - 0.728 - 0.864 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
30. CABZ01111990.1 CABZ01111990.1 4374 1.59 - - - - - - 0.817 - 0.773
31. FAM171A2 FAM171A2 707 1.578 - - 0.701 - - - 0.877 - -
32. msi1 ENSDARG00000010710 2634 1.573 - - - - - - 0.820 - 0.753 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
33. emp1 ENSDARG00000069632 251 1.573 - - - - 0.857 - 0.716 - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
34. dla ENSDARG00000010791 9281 1.572 - - - - - - 0.797 - 0.775 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
35. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.567 - - - - - - 0.730 - 0.837 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
36. parp1 ENSDARG00000019529 6787 1.555 - 0.851 - - - - - - 0.704 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
37. fam60al 2846 1.554 - - - - - - 0.748 - 0.806 family with sequence similarity 60, member A, like
38. tox ENSDARG00000032317 9126 1.549 - - - - - - 0.810 - 0.739 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
39. tmpob ENSDARG00000022978 8121 1.547 - - - - - - 0.770 - 0.777 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
40. pou3f2a ENSDARG00000070220 817 1.538 - - - - - - 0.814 - 0.724 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
41. stard3nl ENSDARG00000045421 316 1.532 0.737 - - - 0.795 - - - - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
42. fyna ENSDARG00000011370 1679 1.529 - - - - - - 0.798 - 0.731 FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
43. cspg5a ENSDARG00000069981 1699 1.513 - - - - - - 0.733 - 0.780 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
44. dpysl3 ENSDARG00000002587 4381 1.511 - - - - - - 0.802 - 0.709 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
45. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.497 - - - - - - 0.790 - 0.707 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
46. ADAM22 ENSDARG00000060532 2259 1.461 - - - - - - 0.734 - 0.727 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
47. plp1a ENSDARG00000103732 3544 1.457 - - - - - - 0.726 - 0.731 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
48. celf4 ENSDARG00000070045 1537 1.444 - - 0.728 - - - 0.716 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
49. pcdh19 ENSDARG00000034344 2378 1.421 - - - - - - 0.705 - 0.716 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
50. CABZ01063077.1 CABZ01063077.1 22 1 - - - - - - 1.000 - -
51. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 1 - - - - - - 1.000 - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
52. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
53. slc35g2a ENSDARG00000056262 52 0.996 - - - - - - 0.996 - - solute carrier family 35, member G2a [Source:ZFIN;Acc:ZDB-GENE-041114-202]
54. TMEM151A ENSDARG00000077986 78 0.996 - - - - - - 0.996 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
55. hif1aa ENSDARG00000006181 109 0.995 - - - - - - 0.995 - - hypoxia inducible factor 1 subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-080917-55]
56. neto1l ENSDARG00000071596 57 0.988 - - - - - - 0.988 - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
57. si:ch211-237c9.3 si:ch211-237c9.3 17 0.986 - - - - - - 0.986 - -
58. si:dkey-238f9.1 ENSDARG00000079446 51 0.986 - - - - - - 0.986 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
59. brf1a ENSDARG00000017835 206 0.986 - - - - - - 0.986 - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
60. tmem91 ENSDARG00000068456 81 0.986 - - - - - - 0.986 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
61. si:dkey-26c10.5 ENSDARG00000088023 9 0.986 - - - - - - 0.986 - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
62. rnf165a ENSDARG00000077906 133 0.986 - - - - - - 0.986 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
63. RBPMS ENSDARG00000099396 61 0.986 - - - - - - 0.986 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
64. si:ch211-39a7.1 ENSDARG00000037427 31 0.986 - - - - - - 0.986 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
65. si:dkey-284e7.2 si:dkey-284e7.2 14 0.986 - - - - - - 0.986 - -
66. fez1 ENSDARG00000023174 701 0.985 - - - - - - 0.985 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
67. kcnd1 ENSDARG00000074746 153 0.985 - - - - - - 0.985 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
68. xkr6 xkr6 286 0.982 - - - - - - 0.982 - -
69. seh1l ENSDARG00000004280 2915 0.98 - 0.980 - - - - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
70. kansl3 ENSDARG00000029556 2487 0.976 - 0.976 - - - - - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
71. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 0.976 - - - - - - 0.976 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
72. ranbp1 ENSDARG00000014817 3371 0.976 - 0.976 - - - - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
73. tmem30aa ENSDARG00000030236 2842 0.974 - 0.974 - - - - - - - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
74. stat5.2 stat5.2 1187 0.972 - 0.972 - - - - - - -
75. schip1 ENSDARG00000035175 3838 0.972 - 0.972 - - - - - - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
76. tpd52l2a ENSDARG00000027154 4359 0.972 - 0.972 - - - - - - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
77. lhfpl4a ENSDARG00000111810 206 0.971 - - - - - - 0.971 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
78. nrp1a ENSDARG00000102153 4154 0.969 - 0.969 - - - - - - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
79. bcar1 ENSDARG00000056525 6563 0.969 - 0.969 - - - - - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
80. zgc:171497 ENSDARG00000100614 1040 0.969 - 0.969 - - - - - - - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
81. IWS1 2428 0.969 - 0.969 - - - - - - - IWS1, SUPT6H interacting protein, transcript variant X2
82. csnk1db ENSDARG00000006125 2581 0.968 - 0.968 - - - - - - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
83. otpa ENSDARG00000014201 2290 0.968 - - - - - - 0.968 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
84. clcn3 ENSDARG00000003269, ENSDARG00000110064 2961 0.967 - 0.967 - - - - - - - chloride channel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1699]
85. rela ENSDARG00000098696 889 0.967 - 0.967 - - - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
86. vgll4b ENSDARG00000103730 5266 0.967 - 0.967 - - - - - - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
87. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.967 - 0.967 - - - - - - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
88. tarbp2 ENSDARG00000070471 1946 0.966 - 0.966 - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
89. ZBTB7B ENSDARG00000021891 843 0.966 - 0.966 - - - - - - - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
90. znf292a ENSDARG00000016763 2253 0.966 - 0.966 - - - - - - - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
91. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 0.966 - 0.966 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
92. taf3 ENSDARG00000045513 1819 0.965 - 0.965 - - - - - - - TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
93. TEP1 ENSDARG00000038713 289 0.965 - 0.965 - - - - - - - telomerase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6153]
94. flot2b ENSDARG00000069774 2831 0.965 - 0.965 - - - - - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
95. snx13 ENSDARG00000013828 684 0.964 - 0.964 - - - - - - - sorting nexin 13 [Source:ZFIN;Acc:ZDB-GENE-050306-12]
96. igf2r ENSDARG00000006094 1578 0.964 - 0.964 - - - - - - - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
97. isoc1 ENSDARG00000060069 1621 0.964 - 0.964 - - - - - - - isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
98. mcts1 ENSDARG00000025972 4662 0.963 - 0.963 - - - - - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
99. SGIP1 SGIP1 236 0.963 - - - - - - 0.963 - -
100. ARHGAP35 2409 0.963 - 0.963 - - - - - - - Rho GTPase activating protein 35b, transcript variant X2

There are 1621 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA