Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrm1

Gene Name Gene ID Reads Annotation
rrm1 ENSDARG00000014017 7296 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]










Genes with expression patterns similar to rrm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrm1 ENSDARG00000014017 7296 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
2. MKI67 ENSDARG00000091150 11038 4.849 0.718 - - 0.706 0.919 - 0.749 0.883 0.874 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
3. nova2 ENSDARG00000017673 7685 3.465 0.870 - - 0.798 0.923 - - - 0.874 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
4. tubb5 ENSDARG00000037997 18691 3.401 0.889 - - 0.759 - 0.913 - 0.840 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
5. hmgb3a ENSDARG00000056725 15668 3.351 0.825 - - - - - 0.825 0.864 0.837 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
6. marcksl1b ENSDARG00000035715 37390 3.274 0.757 - - 0.791 - - - 0.898 0.828 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
7. hnrnpub ENSDARG00000004735 16496 3.237 0.817 - - 0.809 - - 0.799 - 0.812 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
8. dla ENSDARG00000010791 9281 3.229 0.874 0.761 - - 0.777 - - - 0.817 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
9. hmgb2b ENSDARG00000053990 11519 3.224 0.841 - 0.702 - - - 0.876 - 0.805 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
10. lfng ENSDARG00000037879 11783 3.188 0.878 0.764 - 0.731 - - - - 0.815 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
11. snrpc ENSDARG00000009871 9567 3.185 0.710 - - 0.812 - - 0.849 - 0.814 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
12. tfdp2 ENSDARG00000042835 1985 3.173 0.769 0.901 - - - - 0.780 - 0.723 transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
13. tmpob ENSDARG00000022978 8121 3.114 0.800 - - 0.763 - - 0.706 - 0.845 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
14. ncalda ENSDARG00000070688 5069 3.113 - 0.724 - - - - 0.781 0.809 0.799 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
15. dut ENSDARG00000106529 3120 3.059 0.748 0.720 - - - - 0.853 - 0.738 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
16. ZFHX3 ENSDARG00000103057 7759 3.044 0.818 - - 0.751 0.755 - 0.720 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
17. dnaja2l ENSDARG00000010745 2367 3.033 0.720 0.704 - - - - - 0.881 0.728 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
18. h2afva ENSDARG00000068820 16427 3.018 - - - 0.731 - - 0.805 0.717 0.765 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
19. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.543 0.831 - - - - - - 0.831 0.881 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
20. wu:fc51f04 wu:fc51f04 7074 2.508 - 0.764 - 0.861 - - - - 0.883
21. hmgb1b ENSDARG00000030479 10398 2.489 0.779 - - - 0.926 - 0.784 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
22. mtss1l mtss1l 2494 2.486 0.751 - - - - 0.989 0.746 - -
23. atp1b2a ENSDARG00000099203 4010 2.484 0.806 - - - - 0.971 0.707 - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
24. elmo1 ENSDARG00000098753 6966 2.483 0.700 - - - - 0.993 - 0.790 - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
25. khsrp ENSDARG00000026489 15738 2.479 0.847 - - - - - 0.794 - 0.838 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
26. HNRNPAB HNRNPAB 22267 2.477 - - - - - - 0.832 0.739 0.906
27. plp1a ENSDARG00000103732 3544 2.474 0.854 - - 0.800 - - - - 0.820 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
28. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.464 - - 0.875 - - - 0.763 0.826 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
29. srsf11 ENSDARG00000098574 12801 2.461 - - - - - 0.982 0.726 - 0.753 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
30. kpnb1 ENSDARG00000104889 9282 2.458 - - - 0.723 - 0.986 - - 0.749 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
31. whsc1l1 8544 2.452 - - - 0.794 - - 0.836 - 0.822 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
32. gnao1a ENSDARG00000016676 8184 2.447 0.853 - - - - - 0.715 - 0.879 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
33. lypla2 ENSDARG00000053656 8971 2.437 - - - - - - 0.761 0.838 0.838 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
34. arnt2 ENSDARG00000103697 5731 2.435 0.766 - - - - - 0.815 - 0.854 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
35. puf60b ENSDARG00000001241 13827 2.421 - 0.760 - - - - - 0.820 0.841 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
36. fzd3a ENSDARG00000021664 1958 2.418 0.833 - - - - - - 0.854 0.731 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
37. slc29a1a ENSDARG00000101289 2074 2.415 0.785 - - 0.818 - - - - 0.812 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
38. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.409 0.812 - - - - - - 0.702 0.895 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
39. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.409 0.745 - - - - - 0.847 - 0.817 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
40. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.406 0.848 - - 0.794 - - - - 0.764 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
41. foxn4 ENSDARG00000010591 2332 2.406 - - - 0.723 - - - 0.852 0.831 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
42. ube2i ube2i 13024 2.394 - - - 0.754 - - 0.821 0.819 -
43. smarca5 ENSDARG00000052348 15433 2.391 - 0.709 - - - - 0.818 - 0.864 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
44. fabp7a ENSDARG00000007697 5211 2.388 0.838 - - 0.760 - - - - 0.790 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
45. snrpe ENSDARG00000033175 7462 2.383 0.783 0.756 - - - - 0.844 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
46. ssbp4 ENSDARG00000056483 10196 2.379 - - 0.722 0.790 - - 0.867 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
47. snrpb ENSDARG00000011125 11729 2.378 - - - 0.752 0.828 - - 0.798 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
48. top1l ENSDARG00000070545 40529 2.369 - - - 0.838 0.751 - 0.780 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
49. sumo3a ENSDARG00000028119 13447 2.36 0.769 - - - - - 0.712 - 0.879 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
50. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.357 0.855 0.740 - - - - - 0.762 - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
51. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.343 - - - 0.722 - - - 0.854 0.767 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
52. mta2 ENSDARG00000013031 2932 2.34 - - - 0.764 - - 0.743 - 0.833 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
53. bri3bp ENSDARG00000010108 6295 2.339 - - - - - - 0.732 0.817 0.790 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
54. sae1 ENSDARG00000010487 2028 2.332 0.831 0.726 - - - - 0.775 - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
55. cdc25 cdc25 3913 2.33 0.748 0.760 - - - - 0.822 - -
56. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.328 - - - 0.758 - - - 0.851 0.719 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
57. srsf4 ENSDARG00000105293 9657 2.324 0.759 0.750 - - - - 0.815 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
58. kif22 ENSDARG00000102624 3694 2.32 - - - - - - 0.798 0.791 0.731 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
59. fubp1 ENSDARG00000029248 15259 2.32 - - - 0.752 0.834 - - 0.734 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
60. puf60a ENSDARG00000032175 5618 2.317 - - - 0.853 - - 0.762 - 0.702 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
61. hoxb9a ENSDARG00000056023 11856 2.317 0.834 - - - - 0.746 0.737 - - homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
62. ebf3 ebf3 4238 2.316 0.711 - - - - - - 0.785 0.820
63. tmem35 ENSDARG00000052567 5685 2.309 0.801 - - 0.770 - - - - 0.738 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
64. vamp2 ENSDARG00000056877 2158 2.3 0.845 - - - - - - 0.737 0.718 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
65. sox3 ENSDARG00000053569 12016 2.295 0.844 0.721 - - - - - - 0.730 SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
66. GATAD2B ENSDARG00000005834 3855 2.295 - - - - - - 0.721 0.843 0.731 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
67. sin3b ENSDARG00000062472 2025 2.294 - 0.800 - - - - 0.744 - 0.750 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
68. ELOVL4 ELOVL4 3026 2.294 0.848 0.743 - - - - - - 0.703
69. dlb ENSDARG00000004232 5120 2.292 0.785 - - 0.742 - - - - 0.765 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
70. bcl11ab ENSDARG00000063153 3032 2.285 - - - 0.749 - - - 0.784 0.752 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
71. smarcd1 ENSDARG00000019004 6028 2.285 - - - 0.746 - - 0.770 - 0.769 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
72. wu:fq41a10 wu:fq41a10 7009 2.282 - - - 0.731 - - 0.778 0.773 -
73. cspg5a ENSDARG00000069981 1699 2.28 0.708 - - 0.742 - - - - 0.830 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
74. SNRPG ENSDARG00000099667 18697 2.274 - 0.708 - - - - 0.799 - 0.767 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
75. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.27 0.752 - - 0.817 - - - - 0.701 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
76. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.27 0.706 0.703 - - - - 0.861 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
77. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 2.268 - - - 0.733 - - 0.742 - 0.793 ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
78. tdg tdg 3269 2.265 0.798 - - - 0.739 - 0.728 - -
79. emc3 ENSDARG00000020607 3406 2.255 - - - - - - 0.719 0.785 0.751 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
80. anp32a ENSDARG00000006487 28249 2.25 0.712 - - - - - 0.751 - 0.787 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
81. kdm1a ENSDARG00000060679 6152 2.249 0.732 - - 0.704 - - 0.813 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
82. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 2.238 - - - - - - 0.730 0.798 0.710 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
83. smc1al ENSDARG00000058203 8838 2.225 - - - - - - 0.702 0.807 0.716 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
84. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 2.222 - - - 0.767 - - - 0.741 0.714 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
85. sarnp ENSDARG00000059357 4768 2.221 - 0.708 - - - - 0.751 - 0.762 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
86. tcea1 ENSDARG00000003531 2912 2.215 - - - 0.746 0.723 - - - 0.746 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
87. pou3f3a ENSDARG00000042032 2835 2.2 0.726 - - 0.736 - - - - 0.738 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
88. TUBA1A ENSDARG00000001889 25294 2.186 0.729 - - 0.701 - - - 0.756 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
89. si:ch73-46j18.5 ENSDARG00000092467 6002 2.176 - 0.716 - - - - 0.743 - 0.717 si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
90. AL954137.2 ENSDARG00000114408 104506 2.156 - - - 0.710 0.721 - - - 0.725
91. mier1a ENSDARG00000041072 1690 2.131 - - - 0.701 0.725 - - - 0.705 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
92. sox21b ENSDARG00000008540 1460 1.87 0.876 - - - - 0.994 - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
93. map1lc3b ENSDARG00000101127 3958 1.862 - - - - - 0.991 0.871 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
94. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.828 - - - - - 0.978 0.850 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
95. fos fos 817 1.799 - - - - - 0.995 0.804 - -
96. GJD2 GJD2 1351 1.785 0.791 - - - - 0.994 - - -
97. HNRNPA2B1 HNRNPA2B1 14997 1.778 - - - - - 0.973 0.805 - -
98. rbm4.2 ENSDARG00000055080 5241 1.761 - - - - - 0.992 - 0.769 - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
99. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.744 - 0.753 - - - 0.991 - - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
100. tuba1c ENSDARG00000055216 8384 1.738 0.883 - - - - - - - 0.855 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]

There are 1420 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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