Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrh

Gene Name Gene ID Reads Annotation
rrh ENSDARG00000039534 4 retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]










Genes with expression patterns similar to rrh

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrh ENSDARG00000039534 4 5 - - - 1.000 1.000 1.000 - 1.000 1.000 retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
2. nid2b ENSDARG00000009471 4 2 - - - - 1.000 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
3. FAM13C FAM13C 1 2 - - - - 1.000 1.000 - - -
4. asic4a ENSDARG00000025162 25 2 - - - - 1.000 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
5. CR774179.1 ENSDARG00000086969 3 1.867 - - - - 1.000 - - - 0.867
6. FAM185A ENSDARG00000019142 3 1.867 - - - - 1.000 - - - 0.867 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
7. CABZ01112732.1 ENSDARG00000068453 4 1.867 - - - - - 1.000 - - 0.867 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
8. cyp2p9 ENSDARG00000022631 1 1.867 - - - - 1.000 - - - 0.867 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
9. grin2cb ENSDARG00000077560 9 1.867 - - - - - 1.000 - - 0.867 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
10. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1.867 - - - - - 1.000 - - 0.867 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
11. zgc:92161 ENSDARG00000101749 27 1.867 - - - - - 1.000 - - 0.867 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
12. lifra ENSDARG00000098857 11 1.867 - - - - 1.000 - - - 0.867 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
13. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.867 - - - - - 1.000 - - 0.867 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
14. ahr1b ENSDARG00000023537 44 1.829 - - - - - 1.000 - - 0.829 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
15. CR855307.2 CR855307.2 1 1.761 - - - - 1.000 - - 0.761 -
16. zgc:112958 zgc:112958 5 1.761 - - - - 1.000 - - 0.761 -
17. CABZ01023423.1 CABZ01023423.1 8 1.758 - - - 0.758 - 1.000 - - -
18. si:dkey-208k4.10 si:dkey-208k4.10 1 1.753 - - - - 0.753 1.000 - - -
19. BX546499.1 ENSDARG00000092602 1 1.628 - - - - - - - 0.761 0.867
20. npy8br ENSDARG00000005780 15 1.58 - - - - - 0.864 - 0.716 - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
21. BX248324.1 ENSDARG00000096489 3 1.567 - - - - 0.806 - - 0.761 -
22. SERINC4 ENSDARG00000044815 45 1.491 - - - - - 0.749 - - 0.742 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
23. SRCIN1 SRCIN1 5 1.487 - - - 0.736 - - - - 0.751
24. si:ch211-167b20.7 si:ch211-167b20.7 3 1.485 - - - - 0.724 - - 0.761 -
25. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
26. CU570800.3 ENSDARG00000109285 0 1 - - - - 1.000 - - - -
27. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
28. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
29. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - - - 1.000 - - - -
30. zgc:194418 ENSDARG00000111790 1 1 - - - - 1.000 - - - - zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
31. si:ch211-262l19.1 si:ch211-262l19.1 0 1 - - - - - 1.000 - - -
32. CABZ01086801.1 CABZ01086801.1 41 1 - - - - 1.000 - - - -
33. TMEM240 TMEM240 13 1 - - - - - 1.000 - - -
34. six7 ENSDARG00000070107 140 1 - - - - - 1.000 - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
35. CABZ01046997.2 CABZ01046997.2 7 1 - - - - 1.000 - - - -
36. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - - - - 1.000 - - - -
37. BX323035.1 ENSDARG00000096937 0 1 - - - - 1.000 - - - -
38. dnah9 ENSDARG00000103383 2 1 - - - - 1.000 - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
39. cpa1 ENSDARG00000030915 0 1 - - - - 1.000 - - - - carboxypeptidase A1 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-050522-438]
40. si:dkey-23a23.1 ENSDARG00000094824 1 1 - - - - - 1.000 - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
41. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
42. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
43. si:dkeyp-50f5.4 si:dkeyp-50f5.4 0 1 - - - - 1.000 - - - -
44. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
45. zgc:101560 1 1 - - - - 1.000 - - - - zgc:101560, transcript variant 2
46. CABZ01080435.1 CABZ01080435.1 1 1 - - - - 1.000 - - - -
47. BX649394.1 BX649394.1 1 1 - - - - 1.000 - - - -
48. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
49. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - 1.000 - - -
50. PHF15 PHF15 2 1 - - - - 1.000 - - - -
51. LAMB3 LAMB3 31 1 - - - - 1.000 - - - -
52. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
53. smtlb ENSDARG00000017251 7 1 - - - - 1.000 - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
54. si:dkeyp-80d11.4 ENSDARG00000103254 13 1 - - - - 1.000 - - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
55. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - - - 1.000 - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
56. si:dkey-21o22.2 ENSDARG00000094118 0 1 - - - - 1.000 - - - - si:dkey-21o22.2 [Source:ZFIN;Acc:ZDB-GENE-061106-4]
57. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
58. PCDH10 PCDH10 7 1 - - - - - 1.000 - - -
59. CR388046.2 ENSDARG00000105519 0 1 - - - - 1.000 - - - -
60. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
61. CT573234.2 CT573234.2 1 1 - - - - - 1.000 - - -
62. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
63. scpp1 ENSDARG00000090416 1 1 - - - - 1.000 - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]
64. neu4 ENSDARG00000057677 1 1 - - - - 1.000 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
65. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
66. zgc:112146 ENSDARG00000104829 34 1 - - - - - 1.000 - - - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
67. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
68. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
69. slc44a5a ENSDARG00000017398 5 1 - - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
70. asip asip 2 1 - - - - - 1.000 - - -
71. rxfp1 ENSDARG00000090071 6 1 - - - - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
72. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
73. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
74. nms 19 1 - - - - 1.000 - - - - neuromedin S, transcript variant X1
75. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
76. MYO9B ENSDARG00000078313 97 1 - - - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
77. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
78. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
79. MDFI ENSDARG00000089564 8 1 - - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
80. wdr20b ENSDARG00000041239 0 1 - - - - 1.000 - - - - WD repeat domain 20b [Source:ZFIN;Acc:ZDB-GENE-041014-234]
81. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
82. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
83. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
84. CR942805.1 CR942805.1 94 1 - - - - 1.000 - - - -
85. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
86. v2ra16 ENSDARG00000091990 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, a16 [Source:ZFIN;Acc:ZDB-GENE-050419-85]
87. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
88. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - - - - - 1.000 - - -
89. si:ch211-162i8.2 ENSDARG00000096041 4 1 - - - - 1.000 - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
90. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
91. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
92. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
93. wdr65 wdr65 251 1 - - - - - 1.000 - - -
94. BSN_1 BSN_1 21 1 - - - - 1.000 - - - -
95. CR339051.1 CR339051.1 9 1 - - - - - 1.000 - - -
96. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
97. GPC5 GPC5 11 1 - - - - 1.000 - - - -
98. PLD4 1 1 - - - - 1.000 - - - - phospholipase D family member 4
99. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - - 1.000 - - -
100. CU929159.1 CU929159.1 0 1 - - - - - 1.000 - - -

There are 806 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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