Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrh

Gene Name Gene ID Reads Annotation
rrh ENSDARG00000039534 4 retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]










Genes with expression patterns similar to rrh

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrh ENSDARG00000039534 4 5 - - - 1.000 1.000 1.000 - 1.000 1.000 retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
2. nid2b ENSDARG00000009471 4 2 - - - - 1.000 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
3. asic4a ENSDARG00000025162 25 2 - - - - 1.000 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
4. FAM13C FAM13C 1 2 - - - - 1.000 1.000 - - -
5. FAM185A ENSDARG00000019142 3 1.867 - - - - 1.000 - - - 0.867 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
6. CR774179.1 ENSDARG00000086969 3 1.867 - - - - 1.000 - - - 0.867
7. CABZ01112732.1 ENSDARG00000068453 4 1.867 - - - - - 1.000 - - 0.867 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
8. zgc:92161 ENSDARG00000101749 27 1.867 - - - - - 1.000 - - 0.867 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
9. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1.867 - - - - - 1.000 - - 0.867 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
10. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.867 - - - - - 1.000 - - 0.867 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
11. grin2cb ENSDARG00000077560 9 1.867 - - - - - 1.000 - - 0.867 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
12. cyp2p9 ENSDARG00000022631 1 1.867 - - - - 1.000 - - - 0.867 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
13. lifra ENSDARG00000098857 11 1.867 - - - - 1.000 - - - 0.867 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
14. ahr1b ENSDARG00000023537 44 1.829 - - - - - 1.000 - - 0.829 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
15. zgc:112958 zgc:112958 5 1.761 - - - - 1.000 - - 0.761 -
16. CR855307.2 CR855307.2 1 1.761 - - - - 1.000 - - 0.761 -
17. CABZ01023423.1 CABZ01023423.1 8 1.758 - - - 0.758 - 1.000 - - -
18. si:dkey-208k4.10 si:dkey-208k4.10 1 1.753 - - - - 0.753 1.000 - - -
19. BX546499.1 ENSDARG00000092602 1 1.628 - - - - - - - 0.761 0.867
20. npy8br ENSDARG00000005780 15 1.58 - - - - - 0.864 - 0.716 - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
21. BX248324.1 ENSDARG00000096489 3 1.567 - - - - 0.806 - - 0.761 -
22. SERINC4 ENSDARG00000044815 45 1.491 - - - - - 0.749 - - 0.742 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
23. SRCIN1 SRCIN1 5 1.487 - - - 0.736 - - - - 0.751
24. si:ch211-167b20.7 si:ch211-167b20.7 3 1.485 - - - - 0.724 - - 0.761 -
25. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - 1.000 - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
26. psmb8 psmb8 0 1 - - - - 1.000 - - - -
27. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
28. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
29. SNORA16 SNORA16 0 1 - - - - 1.000 - - - -
30. CABZ01046997.2 CABZ01046997.2 7 1 - - - - 1.000 - - - -
31. CR846080.4 CR846080.4 6 1 - - - - - 1.000 - - -
32. PATL2 PATL2 10 1 - - - - 1.000 - - - -
33. si:ch211-262l19.1 si:ch211-262l19.1 0 1 - - - - - 1.000 - - -
34. zgc:175284 ENSDARG00000078159 29 1 - - - - - 1.000 - - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
35. si:ch211-209l18.6 si:ch211-209l18.6 0 1 - - - - 1.000 - - - -
36. BX927122.3 BX927122.3 19 1 - - - - - 1.000 - - -
37. smad6b ENSDARG00000031763 12 1 - - - - 1.000 - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
38. TRIM14_12 TRIM14_12 1 1 - - - - 1.000 - - - -
39. olfcg9 ENSDARG00000105189 1 1 - - - - - 1.000 - - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
40. lpar5b ENSDARG00000068638 2 1 - - - - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
41. BX324142.2 ENSDARG00000117006 1 1 - - - - 1.000 - - - -
42. pik3ap1 ENSDARG00000078285 23 1 - - - - - 1.000 - - - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
43. gpc2 ENSDARG00000104217 10 1 - - - - 1.000 - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
44. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
45. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
46. wdr20b ENSDARG00000041239 0 1 - - - - 1.000 - - - - WD repeat domain 20b [Source:ZFIN;Acc:ZDB-GENE-041014-234]
47. si:dkey-188i13.7 ENSDARG00000078389 81 1 - - - - 1.000 - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
48. BSN_1 BSN_1 21 1 - - - - 1.000 - - - -
49. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - - 1.000 - - - -
50. rxfp1 ENSDARG00000090071 6 1 - - - - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
51. ndr2 ENSDARG00000101279 2 1 - - - - 1.000 - - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
52. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
53. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
54. il21r il21r 74 1 - - - - - 1.000 - - -
55. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1 - - - - 1.000 - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]
56. CU459095.1 CU459095.1 7 1 - - - - - 1.000 - - -
57. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
58. zgc:153846 ENSDARG00000040738 1 1 - - - - - 1.000 - - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
59. ZBED1 ZBED1 2 1 - - - - 1.000 - - - -
60. nr4a2a ENSDARG00000017007 140 1 - - - - - 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
61. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
62. si:ch211-277g23.4 si:ch211-277g23.4 0 1 - - - - 1.000 - - - -
63. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -
64. hs6st3b ENSDARG00000069500 5 1 - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
65. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
66. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
67. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
68. gpr12 ENSDARG00000062934 7 1 - - - - - 1.000 - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
69. cpa1 ENSDARG00000030915 0 1 - - - - 1.000 - - - - carboxypeptidase A1 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-050522-438]
70. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
71. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
72. si:dkey-4p15.4 ENSDARG00000096658 0 1 - - - - 1.000 - - - - si:dkey-4p15.4 [Source:ZFIN;Acc:ZDB-GENE-121214-305]
73. FP015916.1 FP015916.1 3 1 - - - - 1.000 - - - -
74. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
75. si:ch211-28e16.5 ENSDARG00000093376 2 1 - - - - 1.000 - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
76. CABZ01048956.1 ENSDARG00000117474 253 1 - - - - 1.000 - - - - probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
77. si:rp71-10g3.1 si:rp71-10g3.1 6 1 - - - - 1.000 - - - -
78. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
79. si:dkey-203o21.2 si:dkey-203o21.2 0 1 - - - - 1.000 - - - -
80. LPHN1_1 LPHN1_1 7 1 - - - - 1.000 - - - -
81. si:dkey-156k2.8 ENSDARG00000087743 0 1 - - - - 1.000 - - - - si:dkey-156k2.8 [Source:ZFIN;Acc:ZDB-GENE-110914-111]
82. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
83. si:dkey-253d23.9 ENSDARG00000074820 24 1 - - - - - 1.000 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
84. zgc:112146 ENSDARG00000104829 34 1 - - - - - 1.000 - - - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
85. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
86. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - - - - 1.000 - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
87. pde11a ENSDARG00000063732 1 1 - - - - 1.000 - - - - phosphodiesterase 11a [Source:ZFIN;Acc:ZDB-GENE-070912-207]
88. BX548000.1 ENSDARG00000099044 45 1 - - - - - 1.000 - - -
89. grpr ENSDARG00000056620 66 1 - - - - - 1.000 - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
90. ppp1r37_1 ENSDARG00000078458 36 1 - - - - 1.000 - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
91. aqp1a.2 ENSDARG00000091027 6 1 - - - - - 1.000 - - - aquaporin 1a (Colton blood group), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-100409-1]
92. smpdl3a ENSDARG00000053119 1 1 - - - - 1.000 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
93. grapb ENSDARG00000022668 6 1 - - - - - 1.000 - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
94. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
95. gpr88 24 1 - - - - - 1.000 - - - G protein-coupled receptor 88
96. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
97. LRRK1 ENSDARG00000007398 2 1 - - - - 1.000 - - - - leucine-rich repeat kinase 1 [Source:ZFIN;Acc:ZDB-GENE-101019-2]
98. emc4 ENSDARG00000039268 553 1 - - - - - 1.000 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
99. GBGT1_1 GBGT1_1 19 1 - - - - - 1.000 - - -
100. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -

There are 806 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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