Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rragca

Gene Name Gene ID Reads Annotation
rragca ENSDARG00000069829, ENSDARG00000110332 1110 Ras-related GTP binding Ca [Source:ZFIN;Acc:ZDB-GENE-050522-355]










Genes with expression patterns similar to rragca

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rragca ENSDARG00000069829, ENSDARG00000110332 1110 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ras-related GTP binding Ca [Source:ZFIN;Acc:ZDB-GENE-050522-355]
2. gfpt2 ENSDARG00000044094 2503 1.646 - 0.847 - - - - 0.799 - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
3. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 1.59 - 0.817 - - - - 0.773 - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
4. ufc1 ENSDARG00000022340 2618 1.583 - 0.703 - - - - 0.880 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
5. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.555 - 0.719 - - - - 0.836 - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
6. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 1.554 - 0.752 - - - - 0.802 - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
7. vps9d1 ENSDARG00000019195 582 1.54 - 0.724 - - - - 0.816 - - VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
8. krt17 ENSDARG00000094041 7683 1.537 - 0.781 - - - - 0.756 - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
9. si:dkey-199f5.8 ENSDARG00000018853 3249 1.535 - 0.811 - - - - 0.724 - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
10. zgc:153924 507 1.532 - 0.763 - - - - 0.769 - - zgc:153924
11. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.527 - - - - - 0.794 0.733 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
12. llgl2 ENSDARG00000023920 2617 1.523 0.725 - - - - - 0.798 - - lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
13. CABZ01054962.1 CABZ01054962.1 91 1.509 0.732 - - - - - 0.777 - -
14. pafah1b1a ENSDARG00000032013 3183 1.506 - 0.798 - - - - 0.708 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
15. lpar2b ENSDARG00000042561 1086 1.497 0.725 - - - - - 0.772 - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
16. GANAB_2 GANAB_2 3210 1.494 - 0.737 - - - - 0.757 - -
17. CABZ01013938.1 CABZ01013938.1 4497 1.487 - - - - - 0.764 0.723 - -
18. si:ch211-232i5.3 ENSDARG00000086874 1256 1.481 - 0.738 - - - - 0.743 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
19. lsr ENSDARG00000099291 881 1.48 - 0.710 - - - - 0.770 - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
20. aup1 ENSDARG00000092609 2431 1.474 - 0.718 - - - - 0.756 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
21. GIT1 ENSDARG00000039489 1157 1.467 - - - - - 0.709 0.758 - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
22. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.461 - 0.743 - - - - 0.718 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
23. myrf ENSDARG00000078676 614 1.46 - - - - - 0.748 0.712 - - myelin regulatory factor [Source:ZFIN;Acc:ZDB-GENE-080204-57]
24. ankrd9 ENSDARG00000028804 392 1.459 - - - - - 0.753 0.706 - - ankyrin repeat domain 9 [Source:ZFIN;Acc:ZDB-GENE-041114-3]
25. si:ch211-71n6.4 ENSDARG00000102234 2499 1.453 - 0.721 - - - 0.732 - - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
26. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 0.916 - - - - - - 0.916 - - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
27. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 0.904 - - - - - - 0.904 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
28. C6H17orf67 C6H17orf67 687 0.903 - 0.903 - - - - - - -
29. tmem258 ENSDARG00000078785 9578 0.902 - - - - - - 0.902 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
30. si:ch73-22o12.1 ENSDARG00000062831 251 0.893 - - - - - - 0.893 - - si:ch73-22o12.1 [Source:ZFIN;Acc:ZDB-GENE-110411-27]
31. ruvbl1 ENSDARG00000002591 2381 0.883 - - - - - - 0.883 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
32. pef1 ENSDARG00000023989 3013 0.879 - - - - - - 0.879 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
33. inhbb ENSDARG00000040777 2141 0.879 - - - - - - 0.879 - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
34. fam102ab ENSDARG00000016866, ENSDARG00000113063 1080 0.878 - 0.878 - - - - - - - family with sequence similarity 102, member Ab [Source:ZFIN;Acc:ZDB-GENE-060929-412]
35. cisd2 ENSDARG00000052703 2841 0.876 - - - - - - 0.876 - - CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
36. prelid1a ENSDARG00000098671 4745 0.873 - - - - - - 0.873 - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
37. prp19 prp19 4804 0.872 - - - - - - 0.872 - -
38. zgc:91985 zgc:91985 1517 0.869 - - - - - - 0.869 - -
39. man1a1 ENSDARG00000005652 877 0.868 - - - - - - 0.868 - - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
40. zc3h7b 2936 0.867 - - - - - - 0.867 - - zinc finger CCCH-type containing 7B
41. slc2a10 ENSDARG00000090820 637 0.863 - 0.863 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
42. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 0.862 - - - - - - 0.862 - - erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
43. phospho1 ENSDARG00000008403 729 0.858 - 0.858 - - - - - - - phosphatase, orphan 1 [Source:ZFIN;Acc:ZDB-GENE-040801-198]
44. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 0.857 - - - - - - 0.857 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
45. bnipl ENSDARG00000060435 1382 0.857 - - - - - - 0.857 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
46. CU862021.1 CU862021.1 5925 0.856 - - - - - - 0.856 - -
47. SLC12A7 SLC12A7 1702 0.855 - - - - - - 0.855 - -
48. cdc20 ENSDARG00000100741 3264 0.852 - - - - - - 0.852 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
49. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 0.852 - - - - - - 0.852 - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
50. ankzf1 ENSDARG00000041904 917 0.85 - - - - - - 0.850 - - ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
51. nudt9 ENSDARG00000087927 1148 0.85 - - - - - - 0.850 - - nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
52. ahctf1 ENSDARG00000077530 2315 0.848 - 0.848 - - - - - - - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
53. rac2 ENSDARG00000038010 5837 0.848 - - - - - - 0.848 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
54. ITCH ITCH 1226 0.848 - - - - - - 0.848 - -
55. brd4 ENSDARG00000078904 5367 0.847 - - - - - - 0.847 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
56. pitpnaa ENSDARG00000039490 1096 0.847 - - - - - - 0.847 - - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
57. ptbp1a ENSDARG00000019362 6290 0.847 - - - - - - 0.847 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
58. spint1a ENSDARG00000102332 1930 0.847 - 0.847 - - - - - - - serine peptidase inhibitor, Kunitz type 1 a [Source:ZFIN;Acc:ZDB-GENE-040426-2169]
59. AL929434.1 AL929434.1 3294 0.847 - - - - - - 0.847 - -
60. CLDN23 CLDN23 2002 0.847 - - - - - - 0.847 - -
61. galnt10 ENSDARG00000103825 320 0.846 - - - - - - 0.846 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
62. ezrb ENSDARG00000025091 2861 0.846 - - - - - - 0.846 - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
63. AC024175.17 AC024175.17 59065 0.845 - - - - - - 0.845 - -
64. galnt12 ENSDARG00000055490 1653 0.844 - - - - - - 0.844 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
65. mtmr9 ENSDARG00000015860 1339 0.844 - - - - - - 0.844 - - myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
66. PLEKHA6 ENSDARG00000020328 2076 0.841 - - - - - - 0.841 - - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
67. ptgs2a ENSDARG00000004539 1207 0.839 - - - - - - 0.839 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
68. s1pr5a ENSDARG00000040526 923 0.838 - 0.838 - - - - - - - sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
69. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.838 - - - - - - 0.838 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
70. casp7 ENSDARG00000091836 657 0.837 - - - - - - 0.837 - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
71. si:ch73-234b20.5 ENSDARG00000086996, ENSDARG00000109882, ENSDARG00000111886 2759 0.837 - - - - - - 0.837 - - si:ch73-234b20.5 [Source:ZFIN;Acc:ZDB-GENE-041008-183]
72. zgc:110540 ENSDARG00000054929 2154 0.836 - - - - - - 0.836 - - zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
73. sar1b ENSDARG00000103403 1699 0.836 - - - - - - 0.836 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
74. abca12 ENSDARG00000074749 2712 0.835 - - - - - - 0.835 - - ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
75. psmg3 ENSDARG00000098391 920 0.835 - - - - - - 0.835 - - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
76. ELMSAN1_1 ELMSAN1_1 1337 0.834 - - - - - - 0.834 - -
77. ubr7 ENSDARG00000005536 1108 0.833 - - - - - - 0.833 - - ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]
78. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.833 - - - - - - 0.833 - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
79. arhgap5 ENSDARG00000061294 2228 0.832 - - - - - - 0.832 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
80. MDFIC ENSDARG00000074223 781 0.829 - - - - - - 0.829 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
81. morc2 ENSDARG00000028539 3259 0.828 - - - - - - 0.828 - - MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
82. srrt ENSDARG00000017762, ENSDARG00000114824 2158 0.828 - - - - - - 0.828 - - serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
83. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 0.828 - - - - - - 0.828 - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
84. zgc:91909 ENSDARG00000021287 1488 0.827 - 0.827 - - - - - - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
85. arhgap27 ENSDARG00000104255 439 0.827 - - - - - - 0.827 - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
86. agpat5 ENSDARG00000063187 1315 0.827 - - - - - - 0.827 - - 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) [Source:ZFIN;Acc:ZDB-GENE-060929-914]
87. CFP ENSDARG00000094451 852 0.826 - - - - - - 0.826 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
88. gmnn ENSDARG00000035957, ENSDARG00000113743 682 0.826 - - - - - - 0.826 - - geminin, DNA replication inhibitor [Source:ZFIN;Acc:ZDB-GENE-030429-30]
89. irf2a ENSDARG00000007387 915 0.826 - - - - - - 0.826 - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
90. TCEB3 2429 0.825 - - - - - - 0.825 - - transcription elongation factor B (SIII), polypeptide 3
91. CABZ01070045.1 CABZ01070045.1 1322 0.825 - - - - - - 0.825 - -
92. acvr1b acvr1b 2963 0.825 - 0.825 - - - - - - -
93. epcam ENSDARG00000040534, ENSDARG00000110073 3322 0.825 - - - - - - 0.825 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
94. padi2 ENSDARG00000044167 6765 0.825 - - - - - - 0.825 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
95. piezo1 ENSDARG00000076870 4704 0.824 - - - - - - 0.824 - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
96. SAYSD1 SAYSD1 149 0.824 - - - - - - 0.824 - -
97. ZDHHC3 ZDHHC3 1208 0.824 - 0.824 - - - - - - -
98. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 0.824 - - - - - - 0.824 - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
99. si:dkey-95p16.2 ENSDARG00000093484 3413 0.824 - - - - - - 0.824 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
100. dnmbp ENSDARG00000074121 2711 0.822 - - - - - - 0.822 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]

There are 741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA