Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpsa

Gene Name Gene ID Reads Annotation
rpsa ENSDARG00000019181 93440 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]










Genes with expression patterns similar to rpsa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpsa ENSDARG00000019181 93440 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
2. rps23 ENSDARG00000021838 145026 2.562 0.888 - - - 0.755 - 0.919 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
3. calm1b ENSDARG00000034187 13158 2.391 0.755 0.804 - 0.832 - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
4. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.856 0.887 - - - - - 0.969 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
5. rpl38 ENSDARG00000006413 59590 1.832 0.840 - - - 0.992 - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
6. sf3a1 ENSDARG00000041887 6702 1.771 - - 0.925 0.846 - - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
7. rpl18 ENSDARG00000029533 89500 1.744 0.894 - - - - - - - 0.850 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
8. rplp0 ENSDARG00000051783 88740 1.728 0.747 - - - 0.981 - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
9. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 1.701 0.757 - - - 0.944 - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
10. rpl35 ENSDARG00000018334 69583 1.689 0.721 - - - - - 0.968 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
11. aurkb ENSDARG00000037640 4874 1.674 - 0.767 0.907 - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
12. rps5 ENSDARG00000043453 91085 1.672 0.812 - 0.860 - - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
13. rps20 ENSDARG00000036044 121457 1.66 - - 0.911 0.749 - - - - - ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
14. rpl23 ENSDARG00000053457 174183 1.659 0.762 - 0.897 - - - - - - ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
15. mybpc3 ENSDARG00000011615 7271 1.613 - - - - - 0.708 0.905 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
16. rps16 ENSDARG00000045487 43243 1.612 0.776 - - 0.836 - - - - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
17. flna ENSDARG00000074201 26242 1.593 - - 0.737 - - - 0.856 - - filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
18. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 1.563 0.794 - - - - - 0.769 - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
19. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 1.55 0.727 - - - - - 0.823 - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
20. ldb3b ENSDARG00000099974 33615 1.546 0.825 - - 0.721 - - - - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
21. rpl19 ENSDARG00000013307 122192 1.512 0.742 0.770 - - - - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
22. myhz1.3 ENSDARG00000067997 155509 1.432 0.724 - - - - - 0.708 - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
23. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.993 - - - - 0.993 - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
24. rap1a rap1a 5654 0.993 - - - - 0.993 - - - -
25. ints12 ENSDARG00000091678 3261 0.993 - - - - 0.993 - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
26. strap ENSDARG00000007405 6426 0.993 - - - - 0.993 - - - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
27. ddx21 ENSDARG00000063626 6695 0.993 - - - - 0.993 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
28. CU862021.1 CU862021.1 5925 0.993 - - - - 0.993 - - - -
29. extl3 ENSDARG00000026811 4815 0.993 - - - - 0.993 - - - - exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
30. tox ENSDARG00000032317 9126 0.993 - - - - 0.993 - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
31. ppm1da ENSDARG00000009273 7713 0.993 - - - - 0.993 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
32. si:ch73-21g5.7 ENSDARG00000093156 9412 0.993 - - - - 0.993 - - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
33. las1l ENSDARG00000062457, ENSDARG00000114475 3987 0.993 - - - - 0.993 - - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
34. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.993 - - - - 0.993 - - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
35. RFC4 ENSDARG00000042458 3694 0.993 - - - - 0.993 - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
36. BX088708.1 BX088708.1 6503 0.993 - - - - 0.993 - - - -
37. ddx39ab ENSDARG00000015111 11619 0.992 - - - - 0.992 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
38. sesn3 ENSDARG00000015822 5328 0.992 - - - - 0.992 - - - - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
39. hif1al ENSDARG00000100826 18627 0.992 - - - - 0.992 - - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
40. FP102272.1 FP102272.1 9473 0.992 - - - - 0.992 - - - -
41. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 0.992 - - - - 0.992 - - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
42. CABZ01080098.1 ENSDARG00000110680 10942 0.992 - - - - 0.992 - - - -
43. cmn ENSDARG00000055527 14039 0.991 - - - - 0.991 - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
44. icn ENSDARG00000009978 85647 0.976 - - - - 0.976 - - - - ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
45. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 0.966 - - - - - - 0.966 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
46. aldob ENSDARG00000053684 30498 0.965 - - - - 0.965 - - - - aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
47. tnni2b.1 ENSDARG00000035958 51597 0.956 - - - - - - 0.956 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
48. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.955 - - - - - - 0.955 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
49. aldoaa ENSDARG00000011665 56184 0.953 - - - - 0.953 - - - - aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
50. mt-nd3 ENSDARG00000063914 62872 0.948 - - - - - - 0.948 - - NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
51. zgc:174153 ENSDARG00000079376 12007 0.948 - - - - 0.948 - - - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
52. erh ENSDARG00000032866 20633 0.945 - - 0.945 - - - - - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
53. atp2a1l ENSDARG00000035458 6222 0.94 - - - - - - 0.940 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
54. tnni1al 8272 0.934 - - - - - - 0.934 - - troponin I, skeletal, slow like, transcript variant X1
55. khdrbs1b ENSDARG00000070475 18157 0.929 - - 0.929 - - - - - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
56. rpl4 ENSDARG00000041182 18655 0.929 - - - - - - 0.929 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
57. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.928 - - - - - - 0.928 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
58. cirbp cirbp 88363 0.927 - - - - - - 0.927 - -
59. rplp2l ENSDARG00000011201 77026 0.927 - - 0.927 - - - - - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
60. srsf3b ENSDARG00000059360 14888 0.927 - - 0.927 - - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
61. smo ENSDARG00000002952 6411 0.926 - - 0.926 - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
62. hsp90ab1 ENSDARG00000029150 102372 0.923 - - - - 0.923 - - - - heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
63. glrx ENSDARG00000028106 16225 0.923 - - 0.923 - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
64. dlx3b ENSDARG00000014626 3647 0.922 - - 0.922 - - - - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
65. fbn2b ENSDARG00000098237 10835 0.921 - - 0.921 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
66. kazald2 ENSDARG00000078518 3062 0.921 - - 0.921 - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
67. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.92 - - 0.920 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
68. mrpl12 ENSDARG00000038768 5539 0.92 - - 0.920 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
69. pdia3 ENSDARG00000102640 7239 0.92 - - 0.920 - - - - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
70. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.92 - - 0.920 - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
71. cops2 ENSDARG00000004785 4911 0.92 - - 0.920 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
72. lamtor2 ENSDARG00000039872 3250 0.919 - - 0.919 - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
73. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 0.919 - - 0.919 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
74. HPCAL1 ENSDARG00000022763 2885 0.919 - - 0.919 - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
75. rps26l ENSDARG00000030408 146322 0.919 - - - - 0.919 - - - - ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
76. ash2l ENSDARG00000060392 4916 0.919 - - 0.919 - - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
77. tfdp1b ENSDARG00000016304 3071 0.919 - - 0.919 - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
78. ik ENSDARG00000004161 3132 0.918 - - 0.918 - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
79. CABZ01029822.1 ENSDARG00000086931 1654 0.918 - - 0.918 - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
80. blzf1 ENSDARG00000011299 2568 0.918 - - 0.918 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
81. ost4 ENSDARG00000096118 7679 0.918 - - 0.918 - - - - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
82. fmr1 ENSDARG00000037433 5132 0.918 - - 0.918 - - - - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
83. eif2ak3 ENSDARG00000062139 3276 0.917 - - 0.917 - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
84. smarcal1 ENSDARG00000102265 1921 0.917 - - 0.917 - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
85. mpz ENSDARG00000038609 1740 0.917 - - 0.917 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
86. hmga2 ENSDARG00000069912 20402 0.917 - - 0.917 - - - - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
87. si:dkey-177p2.6 ENSDARG00000042322 2783 0.917 - - 0.917 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
88. toporsb ENSDARG00000105028 1898 0.917 - - 0.917 - - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
89. NSMCE2 ENSDARG00000076379 2133 0.917 - - 0.917 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
90. timmdc1 ENSDARG00000053466 2179 0.917 - - 0.917 - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
91. bdh1 ENSDARG00000059388 3390 0.917 - - 0.917 - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
92. si:ch73-138n13.1 ENSDARG00000075349 4411 0.916 - - 0.916 - - - - - - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
93. commd4 ENSDARG00000061946 3281 0.916 - - 0.916 - - - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
94. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.916 - - - - - - 0.916 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
95. mef2d ENSDARG00000040237 6144 0.915 - - 0.915 - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
96. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 0.914 - - 0.914 - - - - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
97. zgc:92061 zgc:92061 21304 0.914 - - 0.914 - - - - - -
98. ube2e1 ENSDARG00000116649 10656 0.91 - - 0.910 - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
99. hspe1 ENSDARG00000056167 21636 0.909 - - - - - - 0.909 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
100. sdprb sdprb 13647 0.906 - - - - - - 0.906 - -

There are 285 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA