Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rps9

Gene Name Gene ID Reads Annotation
rps9 ENSDARG00000011405, ENSDARG00000113248 100731 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]










Genes with expression patterns similar to rps9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps9 ENSDARG00000011405, ENSDARG00000113248 100731 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
2. cav3 ENSDARG00000024141 14906 1.663 0.787 - - - - - - - 0.876 caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
3. pfdn4 ENSDARG00000061228 8266 1.663 0.751 - - - - - - - 0.912 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
4. atp5mf ENSDARG00000037867 11052 1.628 0.702 - - - - - - - 0.926 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
5. rpl24 ENSDARG00000099104 65580 1.553 0.823 - - 0.730 - - - - - ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
6. rpl8 ENSDARG00000014867 168995 1.53 0.722 - - - - - 0.808 - - ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
7. rpl36 ENSDARG00000100588 115695 1.508 0.766 - - 0.742 - - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
8. cfl1 ENSDARG00000021124 78399 1.489 0.760 - - - 0.729 - - - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
9. rpl27 ENSDARG00000015128 108038 1.468 0.716 - - - - - - 0.752 - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
10. eef1g ENSDARG00000056119 52958 1.439 0.705 - - - - - 0.734 - - eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
11. prpf39 ENSDARG00000100209 3721 0.928 - - - - - - - - 0.928 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
12. ubqln4 ENSDARG00000052975 6453 0.928 - - - - - - - - 0.928 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
13. snrpd1 ENSDARG00000011648 8615 0.928 - - - - - - - - 0.928 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
14. stip1 ENSDARG00000004906 7742 0.927 - - - - - - - - 0.927 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
15. vta1 ENSDARG00000013732 6072 0.927 - - - - - - - - 0.927 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
16. apex1 ENSDARG00000045843 6345 0.927 - - - - - - - - 0.927 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
17. nup98 ENSDARG00000074955 3998 0.927 - - - - - - - - 0.927 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
18. BAZ2B BAZ2B 3285 0.926 - - - - - - - - 0.926
19. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.926 - - - - - - - - 0.926 regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
20. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 0.926 - - - - - - - - 0.926 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
21. nup155 ENSDARG00000001777 3417 0.925 - - - - - - - - 0.925 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
22. myh10 ENSDARG00000000103 7522 0.925 - - - - - - - - 0.925 myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
23. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.925 - - - - - - - - 0.925 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
24. ash1l ENSDARG00000070981 2520 0.925 - - - - - - - - 0.925 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
25. BX957337.1 BX957337.1 1685 0.925 - - - - - - - - 0.925
26. igfbp5b ENSDARG00000025348 3803 0.925 - - - - - - - - 0.925 insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
27. kctd5 kctd5 13455 0.925 - - - - - - - - 0.925
28. C1QBP ENSDARG00000039887 11186 0.925 - - - - - - - - 0.925 complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
29. foxp2 ENSDARG00000005453 1504 0.924 - - - - - - - - 0.924 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
30. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.924 - - - - - - - - 0.924 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
31. kdm1a ENSDARG00000060679 6152 0.924 - - - - - - - - 0.924 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
32. cnrip1a ENSDARG00000091683 1491 0.924 - - - - - - - - 0.924 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
33. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 0.923 - - - - - - - - 0.923 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
34. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.923 - - - - - - - - 0.923 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
35. gata3 ENSDARG00000016526 1857 0.923 - - - - - - - - 0.923 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
36. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.923 - - - - - - - - 0.923 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
37. acbd6 ENSDARG00000039456 2355 0.923 - - - - - - - - 0.923 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
38. gltscr1 gltscr1 1487 0.923 - - - - - - - - 0.923
39. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.923 - - - - - - - - 0.923 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
40. cdk5r1b ENSDARG00000045087 2075 0.922 - - - - - - - - 0.922 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
41. mtmr9 ENSDARG00000015860 1339 0.922 - - - - - - - - 0.922 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
42. hddc3 ENSDARG00000020473 2814 0.922 - - - - - - - - 0.922 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
43. tmed7 ENSDARG00000046022 2435 0.922 - - - - - - - - 0.922 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
44. NRD1 NRD1 3486 0.922 - - - - - - - - 0.922
45. NDST1 NDST1 1584 0.922 - - - - - - - - 0.922
46. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 0.922 - - - - - - - - 0.922 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
47. naa15a ENSDARG00000003213 5889 0.922 - - - - - - - - 0.922 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
48. C24H7orf50 1417 0.921 - - - - - - - - 0.921 chromosome 24 C7orf50 homolog, transcript variant X2
49. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 0.921 - - - - - - - - 0.921 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
50. tsen2 ENSDARG00000091851 1467 0.921 - - - - - - - - 0.921 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
51. ndufa2 ENSDARG00000021984 4754 0.921 - - - - - - - - 0.921 NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
52. agpat9 agpat9 938 0.921 - - - - - - - - 0.921
53. zgc:162967 zgc:162967 2132 0.921 - - - - - - - - 0.921
54. vsnl1a ENSDARG00000023228 1584 0.921 - - - - - - - - 0.921 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
55. polr3k ENSDARG00000037835 1552 0.921 - - - - - - - - 0.921 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
56. eya2 ENSDARG00000018984 1768 0.92 - - - - - - - - 0.920 EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
57. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.92 - - - - - - - - 0.920 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
58. kbtbd12 ENSDARG00000001882 1196 0.92 - - - - - - - - 0.920 kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
59. smyd5 ENSDARG00000071669 1194 0.92 - - - - - - - - 0.920 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
60. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.92 - - - - - - - - 0.920 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
61. spag1a ENSDARG00000004017 1140 0.92 - - - - - - - - 0.920 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
62. BX296557.2 BX296557.2 1083 0.92 - - - - - - - - 0.920
63. jam2b ENSDARG00000079071 1031 0.92 - - - - - - - - 0.920 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
64. TRIM65 ENSDARG00000077098 991 0.92 - - - - - - - - 0.920 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
65. jam3a ENSDARG00000114589 630 0.92 - - - - - - - - 0.920 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
66. serpinb1 ENSDARG00000055416 1320 0.92 - - - - - - - - 0.920 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
67. rnf115 ENSDARG00000062450 1284 0.919 - - - - - - - - 0.919 ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
68. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.918 - - - - - - - - 0.918 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
69. mier1b ENSDARG00000001447 1680 0.917 - - - - - - - - 0.917 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
70. selt2 12741 0.916 - - - - - - - - 0.916 selenoprotein T, 2
71. cdc42bpb ENSDARG00000019383 5976 0.915 - - - - - - - - 0.915 CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
72. nid1a ENSDARG00000068710 3948 0.915 - - - - - - - - 0.915 nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
73. tmeff1b ENSDARG00000056740 11253 0.914 - - - - - - - - 0.914 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
74. ndufs8a ENSDARG00000051986 17548 0.914 - - - - - - 0.914 - - NADH:ubiquinone oxidoreductase core subunit S8a [Source:ZFIN;Acc:ZDB-GENE-040426-2153]
75. ckap5 ENSDARG00000102674 5068 0.913 - - - - - - - - 0.913 cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
76. cnih4 ENSDARG00000087759 3937 0.912 - - - - - - - - 0.912 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
77. snx12 ENSDARG00000019060 9563 0.912 - - - - - - - - 0.912 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
78. zgc:195001 ENSDARG00000070484 3281 0.91 - - - - - - - - 0.910 zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
79. ZFHX2 2463 0.909 - - - - - - - - 0.909 zinc finger homeobox 2, transcript variant X2
80. hoxa10b ENSDARG00000031337 3992 0.909 - - - - - - - - 0.909 homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
81. zgc:77816 zgc:77816 800 0.907 - - - - - - - - 0.907
82. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.906 - - - - - - - - 0.906 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
83. jph1b ENSDARG00000038826 7416 0.905 - - - - - - - - 0.905 junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
84. syne2b ENSDARG00000053484 9225 0.904 - - - - - - - - 0.904 spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
85. CNDP1 CNDP1 6456 0.904 - - - - - - - - 0.904
86. nt5c3a ENSDARG00000058597 14299 0.901 - - - - - - - - 0.901 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
87. rpl4 ENSDARG00000041182 18655 0.888 - - - - - - - - 0.888 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
88. midn ENSDARG00000018524 7559 0.879 - - - - - - - - 0.879 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
89. cbx5 ENSDARG00000061187 24026 0.879 - - - - - - - - 0.879 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
90. myhz1.2 ENSDARG00000067995 29117 0.874 - - - - - - 0.874 - - myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
91. rpl34 ENSDARG00000029500 48540 0.874 0.874 - - - - - - - - ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
92. TNRC6A ENSDARG00000079688 14433 0.873 - - - - - - - - 0.873 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
93. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.871 - - - - - - - - 0.871 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
94. rps5 ENSDARG00000043453 91085 0.865 - - - - - - 0.865 - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
95. rps6 ENSDARG00000019778 87546 0.859 0.859 - - - - - - - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
96. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 0.844 - - - - - - - - 0.844 adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
97. ccne2 ENSDARG00000098529 4695 0.84 - - - - - - - - 0.840 cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
98. rpl14 ENSDARG00000103433 69914 0.835 0.835 - - - - - - - - ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
99. capza1a ENSDARG00000034240 24012 0.834 - - - - - - - - 0.834 capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
100. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 0.832 0.832 - - - - - - - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]

There are 49 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA