Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rps6

Gene Name Gene ID Reads Annotation
rps6 ENSDARG00000019778 87546 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]










Genes with expression patterns similar to rps6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps6 ENSDARG00000019778 87546 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
2. tpm2 ENSDARG00000104682 36853 2.415 0.785 - - - - - 0.920 - 0.710 tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
3. tmod4 ENSDARG00000020890 17436 1.73 - - - - - 0.798 0.932 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
4. rpl18 ENSDARG00000029533 89500 1.707 - - - - - 0.730 0.977 - - ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
5. desma ENSDARG00000058656 30292 1.636 - 0.710 - - - - 0.926 - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
6. ostc ENSDARG00000104901 16240 1.56 - - 0.728 - - - 0.832 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
7. tnnt2c ENSDARG00000032242 28801 1.46 0.734 - - - - 0.726 - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
8. mt-nd4 ENSDARG00000063917 481351 1.453 0.725 0.728 - - - - - - - NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. rps15 ENSDARG00000070849, ENSDARG00000110979 102534 0.959 - - - - - - 0.959 - - ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
10. RPL29 ENSDARG00000077717 88791 0.955 - - - - - - 0.955 - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
11. rps27.1 ENSDARG00000023298 86382 0.919 - - - - - - 0.919 - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
12. marcksl1a ENSDARG00000039034 37303 0.906 - - - - - - 0.906 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
13. mt-nd2 ENSDARG00000063899 553982 0.889 0.889 - - - - - - - - NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. atp5h 18018 0.879 - - - - - - 0.879 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
15. atp5c1 31368 0.877 - - - - - - 0.877 - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
16. cfl1 ENSDARG00000021124 78399 0.876 - - - - - 0.876 - - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
17. msna ENSDARG00000058128, ENSDARG00000114614 23727 0.873 - - - - - - - - 0.873 moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
18. rps29 ENSDARG00000041232 71334 0.861 - - - - - 0.861 - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
19. rps9 ENSDARG00000011405, ENSDARG00000113248 100731 0.859 0.859 - - - - - - - - ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
20. hbbe1.1 ENSDARG00000113599 64815 0.857 - - - - - - 0.857 - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
21. rps3 ENSDARG00000103007 77047 0.855 - - - - 0.855 - - - - ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
22. rpl22l1 ENSDARG00000010244 36262 0.85 - - - - - - - - 0.850 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
23. vcl vcl 6667 0.849 - - - - - - 0.849 - -
24. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.845 - - - 0.845 - - - - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
25. aldh7a1 ENSDARG00000018426 4637 0.843 - - - - - - 0.843 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
26. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 0.842 0.842 - - - - - - - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
27. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.842 - - - - - - 0.842 - -
28. ncl ENSDARG00000002710 16951 0.841 - - - - - - 0.841 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
29. eif5a2 ENSDARG00000056186 43804 0.838 - - - - - - 0.838 - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
30. ndufab1b ENSDARG00000014915 12796 0.838 - - - - - 0.838 - - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
31. cx43.4 ENSDARG00000007099 16369 0.835 - - - - - - - - 0.835 connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
32. si:ch211-51e12.7 ENSDARG00000045914 9598 0.833 - - - - - - 0.833 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
33. acta1a ENSDARG00000036371 137508 0.831 0.831 - - - - - - - - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
34. tuba1b ENSDARG00000045367 8485 0.83 - - - - - - - - 0.830 tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
35. SNORD72 SNORD72 4018 0.829 - - - - - - 0.829 - -
36. lfng ENSDARG00000037879 11783 0.829 - - - - - - 0.829 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
37. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 0.829 0.829 - - - - - - - - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
38. si:ch211-160e1.5 5586 0.827 - - - - - - 0.827 - - si:ch211-160e1.5
39. sgms1 ENSDARG00000029621 6376 0.827 - - - - - - 0.827 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
40. mt-co2 ENSDARG00000063908 621861 0.827 0.827 - - - - - - - - cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
41. eif5a ENSDARG00000017235 108602 0.826 0.826 - - - - - - - - eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
42. ryr1a ENSDARG00000011422 2377 0.826 - - - - - - 0.826 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
43. wwp2 ENSDARG00000061345 3459 0.825 - - - - - - 0.825 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
44. mt-nd3 ENSDARG00000063914 62872 0.823 - - - - - - - - 0.823 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
45. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.822 - - - - - - 0.822 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
46. NDUFB2 ENSDARG00000045490 9141 0.822 - - - - - - 0.822 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
47. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.822 - - - - - - 0.822 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
48. rtf1 ENSDARG00000008947 6596 0.822 - - - - - - 0.822 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
49. myoz1b ENSDARG00000071445 13381 0.821 - - - - - 0.821 - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
50. rps26 ENSDARG00000037071 40061 0.821 - - - - - - - - 0.821 ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
51. rnd3a ENSDARG00000076799 4705 0.821 - - - - - - 0.821 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
52. lepre1 lepre1 5346 0.821 - - - - - - 0.821 - -
53. pdlim5b ENSDARG00000027600 4252 0.821 - - - - - - 0.821 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
54. SNORD33 SNORD33 3284 0.821 - - - - - - 0.821 - -
55. dct ENSDARG00000006008 2466 0.819 - - - - - - 0.819 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
56. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 0.819 - - - - - 0.819 - - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
57. smarce1 ENSDARG00000016871 9628 0.819 - - - - - - - - 0.819 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
58. ptprfb ENSDARG00000005754 7178 0.819 - - - - - - 0.819 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
59. CCNA2 ENSDARG00000011094 3996 0.819 - - - - - - 0.819 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
60. pinx1 ENSDARG00000023532 4452 0.818 - - - - - - 0.818 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
61. pcif1 ENSDARG00000099084 2851 0.817 - - - - - - 0.817 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
62. gcn1l1 gcn1l1 6031 0.817 - - - - - - 0.817 - -
63. pfn2l ENSDARG00000012682 21690 0.817 - - - - - - - - 0.817 profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
64. lasp1 ENSDARG00000057867 18721 0.817 - - - - - - - - 0.817 LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
65. oafa ENSDARG00000075851 2015 0.817 - - - - - - 0.817 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
66. rpl6 ENSDARG00000058451 82152 0.816 - - - - - 0.816 - - - ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
67. hoxc10a ENSDARG00000070348 2323 0.815 - - - - - - 0.815 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
68. plagl2 ENSDARG00000076657 2057 0.815 - - - - - - 0.815 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
69. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 0.815 - - - - - - 0.815 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
70. CR847934.1 CR847934.1 2658 0.815 - - - - - - 0.815 - -
71. atp6ap1b ENSDARG00000037153 3970 0.814 - - - - - - 0.814 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
72. purbb ENSDARG00000103546 4983 0.814 - - - - - - 0.814 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
73. rfxap ENSDARG00000076891 1299 0.814 - - - - - - 0.814 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
74. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.814 - - - - - - 0.814 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
75. ttll4 ENSDARG00000078935 1663 0.814 - - - - - - 0.814 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
76. LMLN ENSDARG00000061265 1618 0.813 - - - - - - 0.813 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
77. ckmb ENSDARG00000040565 505935 0.813 0.813 - - - - - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
78. alcamb ENSDARG00000058538 5672 0.813 - - - - - - 0.813 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
79. CR388095.3 CR388095.3 2548 0.813 - - - - - - 0.813 - -
80. cenpf ENSDARG00000055133 5267 0.813 - - - - - - 0.813 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
81. slc4a2b ENSDARG00000052330 1900 0.812 - - - - - - 0.812 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
82. eif3f ENSDARG00000077533 24387 0.812 - - - - - 0.812 - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
83. PREX2 ENSDARG00000071692 827 0.812 - - - - - - 0.812 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
84. slc7a4 ENSDARG00000068286 1693 0.812 - - - - - - 0.812 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
85. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.812 - - - - - - 0.812 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
86. si:dkey-184p9.7 ENSDARG00000092726 2679 0.812 - - - - - - 0.812 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
87. ube2a ENSDARG00000098466 12765 0.812 - - - - - - - - 0.812 ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
88. fam160a1 fam160a1 1445 0.812 - - - - - - 0.812 - -
89. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 0.812 0.812 - - - - - - - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
90. FAT1 FAT1 689 0.811 - - - - - - 0.811 - -
91. cx44.1 cx44.1 799 0.811 - - - - - - 0.811 - -
92. TSG101 TSG101 1686 0.811 - - - - - - 0.811 - -
93. myl1 ENSDARG00000014196 98943 0.81 0.810 - - - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
94. lhfpl2b_1 ENSDARG00000098153 1596 0.81 - - - - - - 0.810 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
95. snrpb ENSDARG00000011125 11729 0.808 - - - - - - - - 0.808 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
96. SSBP4 ENSDARG00000056483 5156 0.808 - - - - - - - - 0.808 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
97. ist1 ENSDARG00000051888 4536 0.807 - - - - - - 0.807 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
98. myh10 ENSDARG00000000103 7522 0.806 - - - - - - 0.806 - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
99. ABHD12B ABHD12B 1877 0.806 - - - - - - 0.806 - -
100. jagn1b ENSDARG00000014995 2063 0.805 - - - - - - 0.805 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]

There are 131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA