Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rps4x

Gene Name Gene ID Reads Annotation
rps4x ENSDARG00000014690 88322 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]










Genes with expression patterns similar to rps4x

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps4x ENSDARG00000014690 88322 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
2. rps7 ENSDARG00000042566 57650 2.491 0.817 - - 0.836 - - - - 0.838 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
3. pgam2 ENSDARG00000057571 23387 2.415 0.817 - - - - 0.703 0.895 - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
4. rpl18 ENSDARG00000029533 89500 2.313 0.772 - 0.804 0.737 - - - - - ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
5. rpl11 ENSDARG00000043509 123498 2.275 - - 0.739 0.822 - - 0.714 - - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
6. rpl7 ENSDARG00000007320 81359 1.762 0.879 - - 0.883 - - - - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
7. rpl28 ENSDARG00000005791 61993 1.751 0.782 - - - - - 0.969 - - ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
8. rplp0 ENSDARG00000051783 88740 1.727 0.886 - 0.841 - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
9. rplp1 ENSDARG00000021864 127841 1.707 0.852 - - - - - 0.855 - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
10. rps15a ENSDARG00000010160 94499 1.695 0.819 - - - - 0.876 - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
11. atp5a1 48823 1.674 0.758 - - - - - 0.916 - - ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
12. smyd1b ENSDARG00000091253 4964 1.663 0.808 - 0.855 - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
13. puf60b ENSDARG00000001241 13827 1.642 - - 0.801 - - - 0.841 - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
14. rpl19 ENSDARG00000013307 122192 1.63 0.744 - 0.886 - - - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
15. rps5 ENSDARG00000043453 91085 1.621 0.882 - - 0.739 - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
16. rpl23 ENSDARG00000053457 174183 1.62 0.905 - - 0.715 - - - - - ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
17. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.603 0.773 - 0.830 - - - - - -
18. rps14 ENSDARG00000036629 125331 1.598 0.851 - - - 0.747 - - - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
19. pfn2l ENSDARG00000012682 21690 1.593 0.816 - - - - 0.777 - - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
20. LGALS3 LGALS3 8665 1.592 - - - - - 0.770 0.822 - -
21. pygma ENSDARG00000055518 15972 1.589 0.782 - 0.807 - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
22. nop58 ENSDARG00000104353 8497 1.584 0.735 - 0.849 - - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
23. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.574 0.734 - - - - - 0.840 - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
24. nop56 ENSDARG00000012820 15231 1.574 0.747 - - - - - 0.827 - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
25. hdac1 ENSDARG00000015427 19804 1.572 0.715 - - - - - 0.857 - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
26. selt2 12741 1.564 0.738 - 0.826 - - - - - - selenoprotein T, 2
27. id1 ENSDARG00000040764 112601 1.56 0.731 - 0.829 - - - - - - inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
28. RPL37A RPL37A 62256 1.553 0.831 - - 0.722 - - - - -
29. eef1b2 ENSDARG00000044521 26570 1.546 0.791 - - - - - - - 0.755 eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
30. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 1.545 0.758 - - 0.787 - - - - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
31. rps3 ENSDARG00000103007 77047 1.532 0.758 - - 0.774 - - - - - ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
32. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.506 0.797 - - - - 0.709 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
33. rps26 ENSDARG00000037071 40061 1.5 0.783 - - - 0.717 - - - - ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
34. rps18 ENSDARG00000100392 64615 1.497 - - - 0.741 0.756 - - - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
35. rpl27 ENSDARG00000015128 108038 1.487 0.764 - 0.723 - - - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
36. efemp2a ENSDARG00000094324 39261 1.475 0.768 - - - - 0.707 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
37. eif3m ENSDARG00000013931 8117 1.465 0.752 - - 0.713 - - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
38. RPS17L RPS17L 51105 1.431 0.724 - - - - - - - 0.707
39. cox8a ENSDARG00000095273 60672 0.978 - - - - - - 0.978 - - cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
40. rps10 ENSDARG00000034897 71395 0.947 - - - - - 0.947 - - - ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
41. ppiaa ENSDARG00000009212 290634 0.923 0.923 - - - - - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
42. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 0.907 - - - - - - 0.907 - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
43. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 0.899 - - - - - - 0.899 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
44. rps23 ENSDARG00000021838 145026 0.896 0.896 - - - - - - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
45. ran ENSDARG00000057026 54670 0.886 - - - - - - 0.886 - - RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
46. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 0.879 0.879 - - - - - - - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
47. mef2ca ENSDARG00000029764 18547 0.879 - - - - - - 0.879 - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
48. rpl23a ENSDARG00000006316 59831 0.879 0.879 - - - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
49. rpl38 ENSDARG00000006413 59590 0.875 0.875 - - - - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
50. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 0.864 - - 0.864 - - - - - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
51. rps27.1 ENSDARG00000023298 86382 0.864 0.864 - - - - - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
52. CPAMD8 ENSDARG00000056530 3481 0.863 - - 0.863 - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
53. s100v2 ENSDARG00000070702 8645 0.863 - - 0.863 - - - - - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
54. ddah2 ENSDARG00000105009 4570 0.863 - - 0.863 - - - - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
55. AKAP2 AKAP2 4178 0.863 - - 0.863 - - - - - -
56. C13H10orf11 1209 0.862 - - 0.862 - - - - - - c13h10orf11 homolog (H. sapiens), transcript variant X2
57. CU695232.1 ENSDARG00000098286 1266 0.862 - - 0.862 - - - - - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
58. si:ch211-152p11.4 ENSDARG00000079705 2341 0.862 - - 0.862 - - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
59. prkag3b ENSDARG00000000369 1945 0.862 - - 0.862 - - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
60. ercc4 ENSDARG00000014161 2167 0.862 - - 0.862 - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
61. dusp11 ENSDARG00000038156 2490 0.862 - - 0.862 - - - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
62. mtor ENSDARG00000053196 2156 0.862 - - 0.862 - - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
63. psmd11a ENSDARG00000060150 4529 0.862 - - 0.862 - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
64. btbd2 btbd2 1296 0.862 - - 0.862 - - - - - -
65. ola1 ENSDARG00000044565 22424 0.862 - - - - - - 0.862 - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
66. vapal ENSDARG00000115862 3108 0.862 - - 0.862 - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
67. tbcela ENSDARG00000002682 1179 0.862 - - 0.862 - - - - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
68. CT485993.2 CT485993.2 1419 0.861 - - 0.861 - - - - - -
69. igf2bp2a ENSDARG00000003421 2810 0.861 - - 0.861 - - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
70. ITFG3 ITFG3 1803 0.861 - - 0.861 - - - - - -
71. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 0.861 - - 0.861 - - - - - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
72. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 0.861 - - 0.861 - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
73. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.861 - - 0.861 - - - - - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
74. sdad1 ENSDARG00000105117 2819 0.861 - - 0.861 - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
75. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.86 0.860 - - - - - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
76. snrpa1 ENSDARG00000024651 3306 0.86 - - 0.860 - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
77. bc2 5213 0.859 - - 0.859 - - - - - - putative breast adenocarcinoma marker
78. mknk2b ENSDARG00000015164 2158 0.859 - - 0.859 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
79. hat1 ENSDARG00000034916 5712 0.858 - - 0.858 - - - - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
80. ccdc25 ENSDARG00000021753 3837 0.858 - - 0.858 - - - - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
81. hars ENSDARG00000003693 7217 0.858 - - 0.858 - - - - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
82. si:rp71-45k5.4 ENSDARG00000035679 10411 0.858 - - 0.858 - - - - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
83. cmn ENSDARG00000055527 14039 0.855 - - - - - - 0.855 - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
84. abracl ENSDARG00000042876 10208 0.855 - - 0.855 - - - - - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
85. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 0.854 - - - - - - 0.854 - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
86. IP6K1 ENSDARG00000073744 524 0.854 - - - - - 0.854 - - - inositol hexakisphosphate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-110317-2]
87. ebna1bp2 ENSDARG00000054980 4621 0.853 0.853 - - - - - - - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
88. psmc2 ENSDARG00000020101 8095 0.852 - - 0.852 - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
89. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.852 0.852 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
90. rpl26 ENSDARG00000102317 154515 0.85 0.850 - - - - - - - - ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
91. rpl15 ENSDARG00000009285 81944 0.849 0.849 - - - - - - - - ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
92. NDUFB1 ENSDARG00000087456 8270 0.849 - - - - - - 0.849 - - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
93. ndufs2 ENSDARG00000007526 6516 0.848 - - - - - - 0.848 - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
94. ptges3b ENSDARG00000089626 5666 0.848 - - - - - 0.848 - - - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
95. slc1a3a ENSDARG00000104431 9888 0.847 - - 0.847 - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
96. rps16 ENSDARG00000045487 43243 0.846 0.846 - - - - - - - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
97. ACTN4_1 ACTN4_1 8550 0.844 - - 0.844 - - - - - -
98. zgc:153867 35088 0.843 - - - - - - 0.843 - - zgc:153867, transcript variant X2
99. tpm4a ENSDARG00000023963 10932 0.843 - - - - - - 0.843 - - tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
100. snrpf ENSDARG00000105037 10241 0.843 - - 0.843 - - - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]

There are 456 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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