Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rps3a

Gene Name Gene ID Reads Annotation
rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 61276 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]










Genes with expression patterns similar to rps3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 61276 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
2. seta ENSDARG00000031495 39977 2.347 - - - 0.795 - - - 0.767 0.785 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
3. uqcrc2a ENSDARG00000014794 3949 1.915 0.953 - - - - - - - 0.962 ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
4. aurka ENSDARG00000012485 3304 1.772 - - - - - - - 0.809 0.963 aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
5. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.769 - - 0.807 - - - - - 0.962 Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
6. rps25 ENSDARG00000041811 52182 1.765 - - - - - - - 0.804 0.961 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
7. vgll4b ENSDARG00000103730 5266 1.737 - - - - - - - 0.775 0.962 vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
8. tmeff1b ENSDARG00000056740 11253 1.718 0.953 - - - - - - 0.765 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
9. eif3f ENSDARG00000077533 24387 1.691 0.845 - 0.846 - - - - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
10. ddi2 ENSDARG00000006477 4190 1.689 0.900 - - - - - - 0.789 - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
11. atp6ap2 ENSDARG00000008735 5096 1.678 0.836 - - - - - - 0.842 - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
12. pdlim4 ENSDARG00000068973 2567 1.674 - - - - - - 0.898 0.776 - PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
13. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.659 0.932 - - - - 0.727 - - - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
14. postnb ENSDARG00000104267 28076 1.652 0.747 - - - - - - - 0.905 periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
15. rps21 ENSDARG00000025850 25954 1.643 0.903 - - - - 0.740 - - - ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-040426-1102]
16. limk2 ENSDARG00000005104 2598 1.628 0.863 - - - - - - 0.765 - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
17. zgc:110339 ENSDARG00000046030 8180 1.612 0.802 - - - - - - 0.810 - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
18. arpc4 ENSDARG00000054063 6150 1.612 0.910 - - 0.702 - - - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
19. snrpf ENSDARG00000105037 10241 1.609 - - 0.846 - - - - 0.763 - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
20. C7H16orf87 C7H16orf87 5197 1.6 - - - - - 0.700 0.900 - -
21. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.582 0.745 - - - - - - - 0.837 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
22. ppib ENSDARG00000092798 21969 1.572 0.755 - - 0.817 - - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
23. psmc2 ENSDARG00000020101 8095 1.563 - - 0.822 - - 0.741 - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
24. txnl4a ENSDARG00000036190 2048 1.563 - - - - - 0.714 - 0.849 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
25. atp5c1 31368 1.561 0.785 - - - - 0.776 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
26. dusp11 ENSDARG00000038156 2490 1.555 - - 0.811 - - - - 0.744 - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
27. ndufs8a ENSDARG00000051986 17548 1.548 0.776 - - - - 0.772 - - - NADH:ubiquinone oxidoreductase core subunit S8a [Source:ZFIN;Acc:ZDB-GENE-040426-2153]
28. cbx3a ENSDARG00000003860 4922 1.541 - - - - - 0.724 - 0.817 - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
29. srsf2a ENSDARG00000057484 25721 1.533 - - 0.819 - - 0.714 - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
30. prc1a ENSDARG00000100918 1746 1.533 - - - - - 0.708 - 0.825 - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
31. cct6a ENSDARG00000021252 33641 1.529 0.723 - - - - - - - 0.806 chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
32. spna2 28368 1.527 - - - - - 0.734 0.793 - - spectrin alpha 2, transcript variant X12
33. pygma ENSDARG00000055518 15972 1.519 - - 0.761 - - 0.758 - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
34. tmed7 ENSDARG00000046022 2435 1.479 - - - - - 0.714 - 0.765 - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
35. rpl5b ENSDARG00000015862, ENSDARG00000109661 79810 1.463 0.760 0.703 - - - - - - - ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
36. zgc:77262 ENSDARG00000044545 5563 1.42 - - - - - 0.710 - 0.710 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
37. cox4i1 ENSDARG00000032970 53784 0.993 - - - - - - 0.993 - - cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
38. si:ch1073-429i10.3 75111 0.976 - - - - - - 0.976 - - si:ch1073-429i10.3, transcript variant X2
39. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 0.974 0.974 - - - - - - - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
40. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 0.965 0.965 - - - - - - - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
41. eif3ha ENSDARG00000102452 9238 0.963 - - - - - - - - 0.963 eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
42. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.963 - - - - - - - - 0.963 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
43. pno1 ENSDARG00000008502 4547 0.963 0.963 - - - - - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
44. ccnt2b ENSDARG00000036510 3353 0.963 - - - - - - - - 0.963 cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
45. nol11 ENSDARG00000026767 2528 0.962 - - - - - - - - 0.962 nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
46. obsl1b ENSDARG00000077388 2511 0.962 - - - - - - - - 0.962 obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
47. ranbp10 ENSDARG00000062138, ENSDARG00000110661 2067 0.962 - - - - - - - - 0.962 RAN binding protein 10 [Source:ZFIN;Acc:ZDB-GENE-070705-86]
48. bhlhe22 ENSDARG00000058039 1673 0.962 - - - - - - - - 0.962 basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
49. nhp2 ENSDARG00000069422 9925 0.962 - - - - - - - - 0.962 NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
50. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 0.962 - - - - - - - - 0.962 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
51. eno2 ENSDARG00000014287 2162 0.962 - - - - - - - - 0.962 enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
52. hoxb9a ENSDARG00000056023 11856 0.962 - - - - - - - - 0.962 homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
53. impdh1b ENSDARG00000029524 7472 0.962 - - - - - - 0.962 - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
54. abca12 ENSDARG00000074749 2712 0.961 - - - - - - - - 0.961 ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
55. vps51 ENSDARG00000062016, ENSDARG00000110076 1646 0.961 - - - - - - - - 0.961 vacuolar protein sorting 51 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6008]
56. MYO5C ENSDARG00000104235 1285 0.961 - - - - - - - - 0.961 myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
57. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.961 - - - - - - - - 0.961 l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
58. SLC9A1 ENSDARG00000067784 1494 0.961 - - - - - - - - 0.961 solute carrier family 9 member A1 [Source:HGNC Symbol;Acc:HGNC:11071]
59. eif2a ENSDARG00000101061 3800 0.961 0.961 - - - - - - - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
60. lig3 ENSDARG00000052553 2665 0.961 - - - - - - - - 0.961 ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
61. notch2 ENSDARG00000043130 4430 0.961 - - - - - - - - 0.961 notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
62. cxcl12a ENSDARG00000037116 5433 0.961 0.961 - - - - - - - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
63. nacad ENSDARG00000012347 1268 0.961 - - - - - - - - 0.961 NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
64. slc25a47a ENSDARG00000059923 1285 0.961 - - - - - - - - 0.961 solute carrier family 25, member 47a [Source:ZFIN;Acc:ZDB-GENE-060616-266]
65. EPHB3 2215 0.96 - - - - - - - - 0.960 EPH receptor B3
66. h2afy2_1 ENSDARG00000087897 9887 0.96 - - - - - - - - 0.960 H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
67. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 0.96 0.960 - - - - - - - - ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
68. hoxb4a ENSDARG00000013533 3857 0.96 - - - - - - - - 0.960 homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
69. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.96 - - - - - - - - 0.960 BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
70. add3a ENSDARG00000040874 4938 0.96 - - - - - - - - 0.960 adducin 3 (gamma) a [Source:ZFIN;Acc:ZDB-GENE-030131-2721]
71. bin2b ENSDARG00000010255 2649 0.96 - - - - - - - - 0.960 bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
72. hnrnpua ENSDARG00000015206 4012 0.959 0.959 - - - - - - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
73. ppm1la ENSDARG00000063218 2142 0.959 0.959 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
74. rnf150a ENSDARG00000024827 1903 0.959 - - - - - - - - 0.959 ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
75. csde1_1 ENSDARG00000074758 2759 0.959 0.959 - - - - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
76. HRC ENSDARG00000045947 10287 0.958 0.958 - - - - - - - - histidine rich calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041008-189]
77. dhx15 ENSDARG00000015392 7496 0.957 0.957 - - - - - - - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
78. CABZ01111496.1 ENSDARG00000003041 15566 0.957 - - - - - - 0.957 - - E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
79. knop1 ENSDARG00000077721 2198 0.957 0.957 - - - - - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
80. C17H14orf166 C17H14orf166 1553 0.957 0.957 - - - - - - - -
81. gtf2a1 ENSDARG00000011000 2026 0.956 0.956 - - - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
82. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.956 0.956 - - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
83. pdlim5b ENSDARG00000027600 4252 0.956 0.956 - - - - - - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
84. naa15a ENSDARG00000003213 5889 0.956 0.956 - - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
85. ndufv2 ENSDARG00000013044 3758 0.956 0.956 - - - - - - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
86. thoc2 ENSDARG00000037503 8711 0.956 - - - - - - - - 0.956 THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
87. ndufa9 ndufa9 8846 0.955 0.955 - - - - - - - -
88. erc1b ENSDARG00000031930 3670 0.955 - - - - - - - - 0.955 ELKS/RAB6-interacting/CAST family member 1b [Source:ZFIN;Acc:ZDB-GENE-041210-51]
89. hadh ENSDARG00000030765 3406 0.955 0.955 - - - - - - - - hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
90. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 0.955 - - - - - - - - 0.955 histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
91. sf3b4 ENSDARG00000018574 7470 0.955 0.955 - - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
92. farsb ENSDARG00000016864 6776 0.955 0.955 - - - - - - - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
93. nktr ENSDARG00000059097 1998 0.955 0.955 - - - - - - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
94. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 0.954 - - - - - - - - 0.954 adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
95. si:ch211-10d23.5 ENSDARG00000095510 2632 0.954 0.954 - - - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
96. nckap5l ENSDARG00000079148 4227 0.954 0.954 - - - - - - - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
97. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 0.954 0.954 - - - - - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
98. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.954 0.954 - - - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
99. st13 ENSDARG00000021973 7787 0.953 0.953 - - - - - - - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
100. ZNF385C ENSDARG00000058154 478 0.953 0.953 - - - - - - - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]

There are 712 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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