Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rps29

Gene Name Gene ID Reads Annotation
rps29 ENSDARG00000041232 71334 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]










Genes with expression patterns similar to rps29

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps29 ENSDARG00000041232 71334 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
2. rps26 ENSDARG00000037071 40061 2.487 0.714 - 0.775 - - - 0.998 - - ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
3. rpl5a ENSDARG00000020197 35209 2.425 0.845 - - 0.869 - - 0.711 - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
4. serbp1a ENSDARG00000074242 10818 2.393 0.728 - 0.789 0.876 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
5. murca murca 6614 1.821 0.843 - - - - - 0.978 - -
6. sucla2 ENSDARG00000005359 5992 1.816 0.837 - - - - - 0.979 - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
7. actn3b ENSDARG00000001431 15747 1.801 0.812 - - - - - 0.989 - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
8. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.798 0.813 - - - - - 0.985 - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
9. kars ENSDARG00000103799 20937 1.785 0.796 - - - - - 0.989 - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
10. neb ENSDARG00000032630, ENSDARG00000109273 19493 1.766 0.783 - - - - - 0.983 - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
11. si:ch211-166a6.5 ENSDARG00000079745 11111 1.744 - - 0.767 - - - 0.977 - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
12. hp1bp3 ENSDARG00000044669 23708 1.742 0.754 - - - - - 0.988 - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
13. rpl13 ENSDARG00000099380 20663 1.718 0.828 - - 0.890 - - - - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
14. tomm5 ENSDARG00000068265 11813 1.718 0.823 - - 0.895 - - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
15. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.711 0.851 - - - - - - - 0.860 enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
16. eif2s3 ENSDARG00000008292 17051 1.704 0.798 - - 0.906 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
17. col18a1 col18a1 20555 1.69 - - 0.806 0.884 - - - - -
18. stip1 ENSDARG00000004906 7742 1.672 0.852 - 0.820 - - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
19. rpl6 ENSDARG00000058451 82152 1.67 0.903 - - - - 0.767 - - - ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
20. cox6b2 ENSDARG00000037860 33134 1.667 0.831 - - 0.836 - - - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
21. flncb ENSDARG00000018820 5595 1.667 0.826 - 0.841 - - - - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
22. rpl19 ENSDARG00000013307 122192 1.661 0.834 - - 0.827 - - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
23. psma6b ENSDARG00000013966 4410 1.66 0.840 - 0.820 - - - - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
24. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 1.65 - - 0.848 - - - 0.802 - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
25. fermt2 ENSDARG00000020242 9351 1.631 0.754 - - 0.877 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
26. rpl23 ENSDARG00000053457 174183 1.613 0.848 - - - 0.765 - - - - ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
27. zgc:101846 15202 1.612 0.785 - 0.827 - - - - - - zgc:101846
28. EIF4G1 EIF4G1 19676 1.607 0.792 0.815 - - - - - - -
29. prpf40a ENSDARG00000058467 6565 1.607 - - 0.725 0.882 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
30. casq2 ENSDARG00000008982 21802 1.603 0.832 - - - - - 0.771 - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
31. psma1 ENSDARG00000101560 5390 1.598 0.788 - 0.810 - - - - - - proteasome subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-040801-15]
32. pgam5 ENSDARG00000035608 4044 1.593 0.782 - 0.811 - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
33. pcmt ENSDARG00000015201 5132 1.591 0.718 - - 0.873 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
34. nhp2 ENSDARG00000069422 9925 1.586 0.736 - 0.850 - - - - - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
35. mt-nd3 ENSDARG00000063914 62872 1.571 0.834 - 0.737 - - - - - - NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
36. pgam2 ENSDARG00000057571 23387 1.57 0.813 0.757 - - - - - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
37. rpl26 ENSDARG00000102317 154515 1.57 0.726 - - - - - 0.844 - - ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
38. rplp2 ENSDARG00000101406 77670 1.556 0.778 0.778 - - - - - - - ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
39. rps15a ENSDARG00000010160 94499 1.556 0.803 - 0.753 - - - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
40. abcf1 ENSDARG00000031795 8635 1.555 0.739 - 0.816 - - - - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
41. tceb1b 14935 1.547 0.791 - - 0.756 - - - - - transcription elongation factor B (SIII), polypeptide 1b
42. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.547 0.821 - 0.726 - - - - - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
43. hdgfrp2 7462 1.546 0.774 - 0.772 - - - - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
44. WU:FC32F04 WU:FC32F04 2525 1.541 0.808 - 0.733 - - - - - -
45. tle2 5014 1.524 0.718 - 0.806 - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
46. sox9b ENSDARG00000043923 5375 1.517 0.784 - 0.733 - - - - - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
47. rtn2a ENSDARG00000016088 12184 1.516 0.809 - - - - - - - 0.707 reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
48. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 1.493 0.708 - - - 0.785 - - - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
49. chd4b ENSDARG00000025789 14299 1.491 0.734 - - 0.757 - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
50. rpl36 ENSDARG00000100588 115695 1.455 0.754 - - - 0.701 - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
51. ube2v2 ENSDARG00000028198 23341 1.451 0.714 - - - - - - - 0.737 ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
52. rps16 ENSDARG00000045487 43243 1.43 0.727 - - - - 0.703 - - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
53. COL2A1 COL2A1 18161 0.983 - - - - - - 0.983 - -
54. matn3a ENSDARG00000069245 2410 0.98 - - - - - - 0.980 - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
55. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 0.979 - - - - - - 0.979 - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
56. serp1 ENSDARG00000099439 23682 0.978 - - - - - - 0.978 - - stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
57. C7H16orf87 C7H16orf87 5197 0.978 - - - - - - 0.978 - -
58. slc22a7a ENSDARG00000056028 2426 0.977 - - - - - - 0.977 - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
59. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 0.977 - - - - - - 0.977 - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
60. csrp1a ENSDARG00000006603 5188 0.976 - - - - - - 0.976 - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
61. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 0.976 - - - - - - 0.976 - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
62. RB1CC1 ENSDARG00000076559 2771 0.976 - - - - - - 0.976 - - RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
63. rnf20 ENSDARG00000016664 3641 0.976 - - - - - - 0.976 - - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
64. hes6 ENSDARG00000019335 4754 0.976 - - - - - - 0.976 - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
65. CR293507.1 ENSDARG00000112572 3198 0.976 - - - - - - 0.976 - -
66. twf1a ENSDARG00000115712 3465 0.976 - - - - - - 0.976 - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
67. st14a ENSDARG00000061173 3800 0.975 - - - - - - 0.975 - - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
68. acat2 ENSDARG00000007127 3052 0.975 - - - - - - 0.975 - - acetyl-CoA acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-990714-22]
69. tmem5 1630 0.975 - - - - - - 0.975 - - transmembrane protein 5
70. cers2a ENSDARG00000013704 4239 0.975 - - - - - - 0.975 - - ceramide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020808-2]
71. XPR1 XPR1 3354 0.975 - - - - - - 0.975 - -
72. pdlim4 ENSDARG00000068973 2567 0.975 - - - - - - 0.975 - - PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
73. smurf2 ENSDARG00000038067 2057 0.975 - - - - - - 0.975 - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
74. si:dkey-42p8.3 1117 0.974 - - - - - - 0.974 - - si:dkey-42p8.3, transcript variant X1
75. SAMD4A ENSDARG00000075759 3282 0.973 - - - - - - 0.973 - - sterile alpha motif domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-070720-7]
76. epdl1 ENSDARG00000076386 1747 0.973 - - - - - - 0.973 - - ependymin-like 1 [Source:ZFIN;Acc:ZDB-GENE-090710-3]
77. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.943 0.943 - - - - - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
78. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.94 0.940 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
79. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 0.924 0.924 - - - - - - - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
80. rpl28 ENSDARG00000005791 61993 0.924 0.924 - - - - - - - - ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
81. RPL37A RPL37A 62256 0.919 0.919 - - - - - - - -
82. RPL29 ENSDARG00000077717 88791 0.915 0.915 - - - - - - - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
83. cox4i1 ENSDARG00000032970 53784 0.911 - - - - - - 0.911 - - cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
84. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 61276 0.909 - - - - - - 0.909 - - ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
85. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.909 0.909 - - - - - - - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
86. eef1b2 ENSDARG00000044521 26570 0.907 0.907 - - - - - - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
87. si:ch1073-429i10.3 75111 0.907 - - - - - - 0.907 - - si:ch1073-429i10.3, transcript variant X2
88. rps23 ENSDARG00000021838 145026 0.907 0.907 - - - - - - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
89. fgg ENSDARG00000037281, ENSDARG00000114705 10817 0.897 - - - - - - 0.897 - - fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
90. ywhabb ENSDARG00000075758 23104 0.893 - - - 0.893 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
91. eif1b ENSDARG00000012688 34711 0.893 - - - 0.893 - - - - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
92. rps25 ENSDARG00000041811 52182 0.892 0.892 - - - - - - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
93. rplp0 ENSDARG00000051783 88740 0.891 0.891 - - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
94. zgc:56493 ENSDARG00000031435 33407 0.89 - - - 0.890 - - - - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
95. hmgb1b ENSDARG00000030479 10398 0.889 - - - 0.889 - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
96. tuba1c ENSDARG00000055216 8384 0.887 - - - 0.887 - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
97. txndc5 ENSDARG00000009342 5387 0.886 - - - 0.886 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
98. chrna1 ENSDARG00000009021 2931 0.885 0.885 - - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
99. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 0.885 - - - - - - 0.885 - - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
100. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 0.884 0.884 - - - - - - - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]

There are 678 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA