Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rps23

Gene Name Gene ID Reads Annotation
rps23 ENSDARG00000021838 145026 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]










Genes with expression patterns similar to rps23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps23 ENSDARG00000021838 145026 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
2. vbp1 ENSDARG00000030241 10619 2.588 0.757 - - - - - 0.910 - 0.921 von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
3. rpsa ENSDARG00000019181 93440 2.562 0.888 - - - 0.755 - 0.919 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
4. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 2.431 0.827 - - 0.707 - - - - 0.897 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
5. rpl38 ENSDARG00000006413 59590 2.407 0.939 - 0.735 - 0.733 - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
6. rpl18 ENSDARG00000029533 89500 2.387 0.835 - - 0.725 - 0.827 - - - ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
7. rps14 ENSDARG00000036629 125331 2.36 0.866 - - 0.745 - - - - 0.749 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
8. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 2.337 0.900 - - - - - 0.727 0.710 - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
9. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.844 0.913 - - - - - 0.931 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
10. rpl26 ENSDARG00000102317 154515 1.762 0.874 - - - - - - - 0.888 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
11. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 1.721 0.806 - - - - - 0.915 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
12. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.72 0.848 - - - - 0.872 - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
13. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 1.716 0.842 - - - - - 0.874 - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
14. rpl17 ENSDARG00000057556 60281 1.713 0.754 - - - - - - - 0.959 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
15. rpl35 ENSDARG00000018334 69583 1.703 0.777 - - - - - 0.926 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
16. rps25 ENSDARG00000041811 52182 1.692 0.824 - - - 0.868 - - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
17. smyd2b ENSDARG00000005629 8181 1.679 0.773 - - - - - 0.906 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
18. selt2 12741 1.663 0.753 - - - - - 0.910 - - selenoprotein T, 2
19. tnni1al 8272 1.662 0.737 - - - - - 0.925 - - troponin I, skeletal, slow like, transcript variant X1
20. rpl23a ENSDARG00000006316 59831 1.624 0.904 - - 0.720 - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
21. rpl22l1 ENSDARG00000010244 36262 1.606 0.811 - - 0.795 - - - - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
22. rpl5b ENSDARG00000015862, ENSDARG00000109661 79810 1.584 - 0.824 - 0.760 - - - - - ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
23. si:dkey-151g10.6 si:dkey-151g10.6 344398 1.575 0.849 - - - - - - 0.726 -
24. RPL37A RPL37A 62256 1.56 0.793 - - 0.767 - - - - -
25. rpl36 ENSDARG00000100588 115695 1.559 0.797 - 0.762 - - - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
26. rplp0 ENSDARG00000051783 88740 1.547 0.847 - - - 0.700 - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
27. rps26l ENSDARG00000030408 146322 1.531 0.813 - - - - - - - 0.718 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
28. rps28 ENSDARG00000035860 34765 1.521 0.734 - - - - 0.787 - - - ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
29. rpl18a ENSDARG00000025073 170983 1.491 - - 0.713 - - 0.778 - - - ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
30. ddx21 ENSDARG00000063626 6695 1.473 0.710 - - - 0.763 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
31. rpl15 ENSDARG00000009285 81944 1.473 0.759 - - - - 0.714 - - - ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
32. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 1.447 - - - 0.706 0.741 - - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
33. rps24 ENSDARG00000039347 70399 1.437 0.723 - - 0.714 - - - - - ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
34. cox6b2 ENSDARG00000037860 33134 1.436 0.714 - 0.722 - - - - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
35. fkbp1aa ENSDARG00000022684 74052 1.42 0.703 - - 0.717 - - - - - FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
36. ddx5 ENSDARG00000038068 35302 0.941 - - - - - - - - 0.941 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
37. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 0.938 - - - - - - - - 0.938 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
38. ppiaa ENSDARG00000009212 290634 0.934 0.934 - - - - - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
39. eif5a2 ENSDARG00000056186 43804 0.933 - - - - - - - - 0.933 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
40. ppib ENSDARG00000092798 21969 0.931 - - - - - - - - 0.931 peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
41. ctnnb1 ENSDARG00000014571 12004 0.929 - - - - - - - - 0.929 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
42. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 0.928 - - - - - - - - 0.928 chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
43. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 0.926 - - - - - - - - 0.926 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
44. lect1 7551 0.924 - - - - - - - - 0.924 leukocyte cell derived chemotaxin 1, transcript variant X1
45. rpl4 ENSDARG00000041182 18655 0.924 - - - - - - 0.924 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
46. mapk6 ENSDARG00000032103 6422 0.924 - - - - - - - - 0.924 mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
47. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.923 - - - - - - 0.923 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
48. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 0.923 - - - - - - - - 0.923 one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
49. NDUFB2 ENSDARG00000045490 9141 0.922 - - - - - - - - 0.922 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
50. KLF16 KLF16 3773 0.92 - - - - - - - - 0.920
51. osgn1 ENSDARG00000052279 5607 0.919 - - - - - - - - 0.919 oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
52. DST ENSDARG00000101858 4395 0.919 - - - - - - - - 0.919 dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
53. slc40a1 ENSDARG00000000241 4882 0.918 - - - - - - - - 0.918 solute carrier family 40 (iron-regulated transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-000511-8]
54. pip5k1bb ENSDARG00000006508 2812 0.917 - - - - - - - - 0.917 phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
55. irf5 ENSDARG00000045681 2594 0.917 - - - - - - - - 0.917 interferon regulatory factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2587]
56. BX000999.2 BX000999.2 2353 0.917 - - - - - - - - 0.917
57. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 0.916 - - - - - - 0.916 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
58. zgc:101000 zgc:101000 9041 0.916 - - - - - - - - 0.916
59. hspe1 ENSDARG00000056167 21636 0.912 - - - - - - 0.912 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
60. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 0.911 - - - - - - - - 0.911 FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
61. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.91 - - - - - - 0.910 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
62. sdprb sdprb 13647 0.908 - - - - - - 0.908 - -
63. rps29 ENSDARG00000041232 71334 0.907 0.907 - - - - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
64. kpnb1 ENSDARG00000104889 9282 0.907 - - - - - - 0.907 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
65. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.907 - - - - - - 0.907 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
66. psmb1 ENSDARG00000009640 8628 0.905 - - - - - - 0.905 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
67. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.905 - - - - - - 0.905 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
68. atp2a1l ENSDARG00000035458 6222 0.904 - - - - - - 0.904 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
69. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.904 - - - - - - 0.904 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
70. rhoad rhoad 8007 0.903 - - - - - - 0.903 - -
71. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.903 - - - - - - 0.903 - -
72. mybpc3 ENSDARG00000011615 7271 0.903 - - - - - - 0.903 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
73. tnni2b.1 ENSDARG00000035958 51597 0.903 - - - - - - 0.903 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
74. CR548630.1 CR548630.1 3301 0.902 - - - - - - 0.902 - -
75. fam133b ENSDARG00000013863 5070 0.902 - - - - - - 0.902 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
76. cirbp cirbp 88363 0.901 - - - - - - 0.901 - -
77. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.901 - - - - - - 0.901 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
78. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.901 - - - - - - 0.901 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
79. si:ch211-71n6.4 ENSDARG00000102234 2499 0.901 - - - - - - 0.901 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
80. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.901 - - - - - - 0.901 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
81. clasp2 ENSDARG00000020345 3382 0.901 - - - - - - 0.901 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
82. BX511252.1 BX511252.1 59309 0.9 - - - - - - - - 0.900
83. foxp1a ENSDARG00000004843 3961 0.9 - - - - - - 0.900 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
84. map7d3 ENSDARG00000060771 1739 0.9 - - - - - - 0.900 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
85. sfrp5 ENSDARG00000039041 1777 0.9 - - - - - - 0.900 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
86. SEMA5B SEMA5B 1316 0.899 - - - - - - 0.899 - -
87. SGPP1 ENSDARG00000060534 1802 0.899 - - - - - - 0.899 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
88. aaas ENSDARG00000102274 1192 0.899 - - - - - - 0.899 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
89. CAPN2 CAPN2 1497 0.898 - - - - - - 0.898 - -
90. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 0.897 - - - - - - - - 0.897 prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
91. rps4x ENSDARG00000014690 88322 0.896 0.896 - - - - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
92. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.896 0.896 - - - - - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
93. rplp1 ENSDARG00000021864 127841 0.895 0.895 - - - - - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
94. syncrip ENSDARG00000040184 24690 0.895 - - - - - - 0.895 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
95. seta ENSDARG00000031495 39977 0.894 - - - - - - 0.894 - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
96. klf11a ENSDARG00000030844 3972 0.894 - - - - - - 0.894 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
97. tegt ENSDARG00000077934 27182 0.893 - - - - - - 0.893 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
98. rps5 ENSDARG00000043453 91085 0.885 0.885 - - - - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
99. apg3l apg3l 5153 0.884 - - - - - - 0.884 - -
100. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 0.88 0.880 - - - - - - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]

There are 458 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA