Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rps20

Gene Name Gene ID Reads Annotation
rps20 ENSDARG00000036044 121457 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]










Genes with expression patterns similar to rps20

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps20 ENSDARG00000036044 121457 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
2. sf3a1 ENSDARG00000041887 6702 1.827 - - 0.963 0.864 - - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
3. rpl14 ENSDARG00000103433 69914 1.698 0.786 - - - - - 0.912 - - ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
4. rpsa ENSDARG00000019181 93440 1.66 - - 0.911 0.749 - - - - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
5. rpl22 ENSDARG00000070437 56743 1.654 0.840 - - - 0.814 - - - - ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
6. mt-co2 ENSDARG00000063908 621861 1.533 0.767 - - - - - - - 0.766 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 1.522 - - - 0.803 - - - 0.719 - ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
8. rps5 ENSDARG00000043453 91085 1.507 - - 0.785 - - - - - 0.722 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
9. syncrip ENSDARG00000040184 24690 1.504 0.772 - - - - - 0.732 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
10. rps14 ENSDARG00000036629 125331 1.464 0.719 - - - - - - 0.745 - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
11. lamtor2 ENSDARG00000039872 3250 0.986 - - 0.986 - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
12. CABZ01029822.1 ENSDARG00000086931 1654 0.986 - - 0.986 - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
13. timmdc1 ENSDARG00000053466 2179 0.986 - - 0.986 - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
14. dlx3b ENSDARG00000014626 3647 0.986 - - 0.986 - - - - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
15. HPCAL1 ENSDARG00000022763 2885 0.986 - - 0.986 - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
16. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 0.985 - - 0.985 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
17. mrpl12 ENSDARG00000038768 5539 0.985 - - 0.985 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
18. mpz ENSDARG00000038609 1740 0.985 - - 0.985 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
19. blzf1 ENSDARG00000011299 2568 0.985 - - 0.985 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
20. commd4 ENSDARG00000061946 3281 0.985 - - 0.985 - - - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
21. smarcal1 ENSDARG00000102265 1921 0.985 - - 0.985 - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
22. eif2ak3 ENSDARG00000062139 3276 0.985 - - 0.985 - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
23. rplp2l ENSDARG00000011201 77026 0.985 - - 0.985 - - - - - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
24. ik ENSDARG00000004161 3132 0.985 - - 0.985 - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
25. cops2 ENSDARG00000004785 4911 0.985 - - 0.985 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
26. tfdp1b ENSDARG00000016304 3071 0.985 - - 0.985 - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
27. bdh1 ENSDARG00000059388 3390 0.985 - - 0.985 - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
28. kazald2 ENSDARG00000078518 3062 0.985 - - 0.985 - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
29. NSMCE2 ENSDARG00000076379 2133 0.985 - - 0.985 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
30. toporsb ENSDARG00000105028 1898 0.985 - - 0.985 - - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
31. si:dkey-177p2.6 ENSDARG00000042322 2783 0.985 - - 0.985 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
32. glrx ENSDARG00000028106 16225 0.985 - - 0.985 - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
33. pdia3 ENSDARG00000102640 7239 0.985 - - 0.985 - - - - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
34. mef2d ENSDARG00000040237 6144 0.984 - - 0.984 - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
35. ash2l ENSDARG00000060392 4916 0.984 - - 0.984 - - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
36. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.984 - - 0.984 - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
37. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.983 - - 0.983 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
38. fbn2b ENSDARG00000098237 10835 0.983 - - 0.983 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
39. srsf3b ENSDARG00000059360 14888 0.982 - - 0.982 - - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
40. aurkb ENSDARG00000037640 4874 0.982 - - 0.982 - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
41. arhgap1 ENSDARG00000024324 6904 0.982 - - 0.982 - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
42. ube2e1 ENSDARG00000116649 10656 0.98 - - 0.980 - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
43. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 0.98 - - 0.980 - - - - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
44. smo ENSDARG00000002952 6411 0.976 - - 0.976 - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
45. si:ch73-138n13.1 ENSDARG00000075349 4411 0.974 - - 0.974 - - - - - - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
46. khdrbs1b ENSDARG00000070475 18157 0.972 - - 0.972 - - - - - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
47. fmr1 ENSDARG00000037433 5132 0.969 - - 0.969 - - - - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
48. ost4 ENSDARG00000096118 7679 0.967 - - 0.967 - - - - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
49. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 0.967 - - 0.967 - - - - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
50. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 0.964 - - 0.964 - - - - - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
51. hmga2 ENSDARG00000069912 20402 0.961 - - 0.961 - - - - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
52. zgc:92061 zgc:92061 21304 0.955 - - 0.955 - - - - - -
53. erh ENSDARG00000032866 20633 0.954 - - 0.954 - - - - - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
54. znf865 ENSDARG00000036698 15532 0.94 - - 0.940 - - - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
55. gng5 ENSDARG00000039830 12102 0.938 - - - 0.938 - - - - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
56. vdac3 ENSDARG00000003695 16776 0.938 - - - - - - 0.938 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
57. arf2 arf2 12369 0.916 - - - - - - 0.916 - -
58. ywhabb ENSDARG00000075758 23104 0.913 - - 0.913 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
59. tnnc1b ENSDARG00000037539 13945 0.883 0.883 - - - - - - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
60. ldb3b ENSDARG00000099974 33615 0.88 - - - 0.880 - - - - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
61. rpl23 ENSDARG00000053457 174183 0.873 - - 0.873 - - - - - - ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
62. dldh ENSDARG00000008785 15202 0.872 0.872 - - - - - - - - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
63. phgdh ENSDARG00000001873 8325 0.868 - - - 0.868 - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
64. otx1a 1607 0.867 - - - 0.867 - - - - - orthodenticle homeobox 1a
65. LRP3 ENSDARG00000008485 1401 0.867 - - - 0.867 - - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
66. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 0.867 - - - 0.867 - - - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
67. yipf3 ENSDARG00000020449 3312 0.866 - - - 0.866 - - - - - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
68. ddrgk1_1 ENSDARG00000037172 1563 0.866 - - - 0.866 - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
69. tox3 ENSDARG00000073957 3075 0.866 - - - 0.866 - - - - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
70. pola2 ENSDARG00000015070 2286 0.866 - - - 0.866 - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
71. gorasp1 gorasp1 3075 0.866 - - - 0.866 - - - - -
72. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 0.866 - - - 0.866 - - - - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
73. uckl1b ENSDARG00000078973 2237 0.866 - - - 0.866 - - - - - uridine-cytidine kinase 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-090311-45]
74. ranbp1 ENSDARG00000014817 3371 0.866 - - - 0.866 - - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
75. naa35 ENSDARG00000012378 3442 0.866 - - - 0.866 - - - - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-030131-306]
76. ncoa5 ENSDARG00000016345 5765 0.866 - - - 0.866 - - - - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
77. luc7l3 ENSDARG00000014366 4416 0.865 - - - 0.865 - - - - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
78. CABZ01111990.1 CABZ01111990.1 4374 0.865 - - - 0.865 - - - - -
79. si:dkey-65b12.6 ENSDARG00000076830 2489 0.865 - - - 0.865 - - - - - si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
80. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 0.864 - - - 0.864 - - - - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
81. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 0.864 - - - 0.864 - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
82. FP016176.1 FP016176.1 7030 0.863 - - - 0.863 - - - - -
83. cdc14b ENSDARG00000021483 4958 0.863 - - - 0.863 - - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
84. ncor2 ENSDARG00000000966 3352 0.863 - - - 0.863 - - - - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
85. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 0.863 - - - 0.863 - - - - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
86. zgc:63587 ENSDARG00000017140 8399 0.862 - - - 0.862 - - - - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
87. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 0.862 - - - 0.862 - - - - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
88. ywhah ENSDARG00000005560 11079 0.861 - - - 0.861 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
89. CWC15 ENSDARG00000013382 8969 0.86 - - - 0.860 - - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
90. tpx2 ENSDARG00000078654 8120 0.86 - - - 0.860 - - - - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
91. tbl1xr1a ENSDARG00000058696 5439 0.86 - - - 0.860 - - - - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
92. sirt2 ENSDARG00000011488 5389 0.86 - - - 0.860 - - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
93. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 0.859 - - - 0.859 - - - - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
94. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 0.858 - - - 0.858 - - - - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
95. lama2 ENSDARG00000099390 24734 0.856 - - - 0.856 - - - - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
96. COL2A1 COL2A1 18161 0.856 - - - 0.856 - - - - -
97. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 0.856 - - - 0.856 - - - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
98. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.856 - - - 0.856 - - - - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
99. anxa2a ENSDARG00000003216 10684 0.855 - - - 0.855 - - - - - annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
100. gpd1b ENSDARG00000043180 6002 0.855 - - - 0.855 - - - - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]

There are 122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA