Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rps13

Gene Name Gene ID Reads Annotation
rps13 ENSDARG00000036298, ENSDARG00000112818 58520 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]










Genes with expression patterns similar to rps13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
2. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 2.546 - - 0.731 0.846 - - 0.969 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
3. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 2.382 0.874 - - - 0.758 - 0.750 - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
4. rpsa ENSDARG00000019181 93440 1.856 0.887 - - - - - 0.969 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
5. rps23 ENSDARG00000021838 145026 1.844 0.913 - - - - - 0.931 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
6. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.729 - 0.766 - - - - 0.963 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
7. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.726 - - - - - - 0.959 - 0.767 sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
8. rpl35 ENSDARG00000018334 69583 1.704 0.727 - - - - - 0.977 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
9. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 1.701 0.718 - - - - - 0.983 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
10. cirbp cirbp 88363 1.7 - - - 0.726 - - 0.974 - -
11. smyd2b ENSDARG00000005629 8181 1.699 0.741 - - - - - 0.958 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
12. syncrip ENSDARG00000040184 24690 1.69 - - - - 0.731 - 0.959 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
13. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 1.689 - 0.718 - - - - 0.971 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
14. sdprb sdprb 13647 1.678 - 0.712 - - - - 0.966 - -
15. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 1.676 - 0.761 - - - - 0.915 - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
16. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 1.653 0.843 - - - - - 0.810 - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
17. ube2i ube2i 13024 1.617 - 0.742 - - - - - - 0.875
18. mt-nd3 ENSDARG00000063914 62872 1.609 0.701 - - - - - 0.908 - - NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
19. eif4g2b ENSDARG00000057167 22982 1.599 - 0.748 - 0.851 - - - - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
20. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 1.594 - - 0.795 - 0.799 - - - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
21. rpl26 ENSDARG00000102317 154515 1.584 0.872 - 0.712 - - - - - - ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
22. murca murca 6614 1.58 0.798 0.782 - - - - - - -
23. hspd1 ENSDARG00000056160 13690 1.576 - 0.808 - - - - - - 0.768 heat shock 60 protein 1 [Source:ZFIN;Acc:ZDB-GENE-021206-1]
24. rps19 ENSDARG00000030602 77975 1.566 0.772 - - 0.794 - - - - - ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
25. rps2 ENSDARG00000077291 105394 1.56 - - - 0.836 - 0.724 - - - ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
26. s100v1 ENSDARG00000070427 6633 1.551 - 0.788 - - - - - - 0.763 S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
27. rps29 ENSDARG00000041232 71334 1.547 0.821 - 0.726 - - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
28. eef1b2 ENSDARG00000044521 26570 1.536 0.765 0.771 - - - - - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
29. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.53 0.786 - - - - - - - 0.744 EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
30. rps7 ENSDARG00000042566 57650 1.528 0.812 - - - - - - - 0.716 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
31. hnrnph1l ENSDARG00000005551 8727 1.526 - 0.768 - - - - - - 0.758 heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
32. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.514 - 0.805 - - 0.709 - - - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
33. rps15a ENSDARG00000010160 94499 1.512 0.757 - - - - 0.755 - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
34. serpinb1l4 ENSDARG00000096888 10462 1.506 - 0.712 - - - - - - 0.794 serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7169]
35. rps11 ENSDARG00000053058 16233 1.506 - - - - 0.723 - - - 0.783 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
36. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.505 0.728 0.777 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
37. atp1b3b ENSDARG00000042837 5163 1.504 0.729 0.775 - - - - - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
38. rps27.1 ENSDARG00000023298 86382 1.497 0.794 0.703 - - - - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
39. cct4 ENSDARG00000013475 23959 1.495 0.744 - - - - - - - 0.751 chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
40. nexn ENSDARG00000057317 10972 1.495 0.762 0.733 - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
41. rps21 ENSDARG00000025850 25954 1.486 - 0.758 - - - 0.728 - - - ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-040426-1102]
42. kcnma1a ENSDARG00000079840 2584 1.483 0.709 - - 0.774 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
43. smtnl1 ENSDARG00000041257 7410 1.48 0.726 0.754 - - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
44. ALDH1L2 ENSDARG00000070230 2550 1.477 0.747 - - - - - - - 0.730 aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
45. cox7c ENSDARG00000104537 12169 1.477 0.737 0.740 - - - - - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
46. tnnt3a ENSDARG00000030270 112506 1.471 0.706 0.765 - - - - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
47. acsf2 ENSDARG00000061201 4413 1.465 - 0.762 - - - - - - 0.703 acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
48. zgc:92518 ENSDARG00000016343 3837 1.46 0.758 0.702 - - - - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
49. RPL37A RPL37A 62256 1.432 0.730 - - - 0.702 - - - -
50. rps27.2 ENSDARG00000055475 51081 1.43 - 0.715 - - - - - - 0.715 ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
51. rpl4 ENSDARG00000041182 18655 0.976 - - - - - - 0.976 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
52. tnni1al 8272 0.969 - - - - - - 0.969 - - troponin I, skeletal, slow like, transcript variant X1
53. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.968 - - - - - - 0.968 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
54. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.966 - - - - - - 0.966 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
55. hspe1 ENSDARG00000056167 21636 0.965 - - - - - - 0.965 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
56. selt2 12741 0.963 - - - - - - 0.963 - - selenoprotein T, 2
57. vbp1 ENSDARG00000030241 10619 0.962 - - - - - - 0.962 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
58. tegt ENSDARG00000077934 27182 0.961 - - - - - - 0.961 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
59. mybpc3 ENSDARG00000011615 7271 0.96 - - - - - - 0.960 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
60. kpnb1 ENSDARG00000104889 9282 0.959 - - - - - - 0.959 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
61. atp2a1l ENSDARG00000035458 6222 0.959 - - - - - - 0.959 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
62. psmb1 ENSDARG00000009640 8628 0.957 - - - - - - 0.957 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
63. rhoad rhoad 8007 0.957 - - - - - - 0.957 - -
64. si:ch211-71n6.4 ENSDARG00000102234 2499 0.956 - - - - - - 0.956 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
65. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.956 - - - - - - 0.956 - -
66. CR548630.1 CR548630.1 3301 0.956 - - - - - - 0.956 - -
67. fam133b ENSDARG00000013863 5070 0.956 - - - - - - 0.956 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
68. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.955 - - - - - - 0.955 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
69. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.954 - - - - - - 0.954 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
70. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.954 - - - - - - 0.954 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
71. clasp2 ENSDARG00000020345 3382 0.954 - - - - - - 0.954 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
72. CAPN2 CAPN2 1497 0.954 - - - - - - 0.954 - -
73. f11r f11r 16668 0.953 - - - - - - 0.953 - -
74. foxp1a ENSDARG00000004843 3961 0.953 - - - - - - 0.953 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
75. klf11a ENSDARG00000030844 3972 0.953 - - - - - - 0.953 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
76. map7d3 ENSDARG00000060771 1739 0.953 - - - - - - 0.953 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
77. sfrp5 ENSDARG00000039041 1777 0.953 - - - - - - 0.953 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
78. SGPP1 ENSDARG00000060534 1802 0.952 - - - - - - 0.952 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
79. SEMA5B SEMA5B 1316 0.952 - - - - - - 0.952 - -
80. aaas ENSDARG00000102274 1192 0.952 - - - - - - 0.952 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
81. apg3l apg3l 5153 0.947 - - - - - - 0.947 - -
82. flna ENSDARG00000074201 26242 0.937 - - - - - - 0.937 - - filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
83. tnni2b.1 ENSDARG00000035958 51597 0.92 - - - - - - 0.920 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
84. atp5l ENSDARG00000011841 32098 0.917 - - - - - 0.917 - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g [Source:ZFIN;Acc:ZDB-GENE-030131-5177]
85. rps14 ENSDARG00000036629 125331 0.913 0.913 - - - - - - - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
86. cotl1 ENSDARG00000026829 23295 0.909 - - - - - - 0.909 - - coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
87. ywhabl ENSDARG00000040287 39045 0.908 - - - 0.908 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
88. rps5 ENSDARG00000043453 91085 0.904 0.904 - - - - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
89. arf1l arf1l 9119 0.902 - - - - - - - - 0.902
90. rpl7 ENSDARG00000007320 81359 0.888 0.888 - - - - - - - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
91. rplp1 ENSDARG00000021864 127841 0.883 0.883 - - - - - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
92. myl12.1 ENSDARG00000099766 50993 0.881 - - - - - - 0.881 - - myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
93. rps4x ENSDARG00000014690 88322 0.879 0.879 - - - - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
94. rca2.1 ENSDARG00000056075 3410 0.876 - - - - - - - - 0.876 regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
95. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 0.871 - - - - - - - - 0.871 protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
96. sun1 ENSDARG00000055350 3622 0.86 - - - - - - - - 0.860 Sad1 and UNC84 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-551]
97. dbi ENSDARG00000026369 36552 0.857 - - - - - - 0.857 - - diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
98. ppiaa ENSDARG00000009212 290634 0.85 0.850 - - - - - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
99. arpc4 ENSDARG00000054063 6150 0.85 - 0.850 - - - - - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
100. eif3i ENSDARG00000017445 21149 0.849 - - - 0.849 - - - - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]

There are 545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA