Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rprd2b

Gene Name Gene ID Reads Annotation
rprd2b ENSDARG00000074676 809 regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]










Genes with expression patterns similar to rprd2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rprd2b ENSDARG00000074676 809 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
2. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.773 - - - 0.950 - - - 0.823 - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
3. si:ch73-387e10.3 si:ch73-387e10.3 517 1.769 - - - 0.886 - - - 0.883 -
4. creb1b ENSDARG00000093420 524 1.757 - 0.812 - 0.945 - - - - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
5. RBM26 ENSDARG00000104130 1012 1.742 - - - 0.899 - - - 0.843 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
6. rnf220a ENSDARG00000060929 693 1.712 - - - 0.906 - - - 0.806 - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
7. atp6ap1a ENSDARG00000041417 898 1.688 - - - 0.866 - - - 0.822 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
8. fbxw2 ENSDARG00000009745 618 1.665 - 0.773 - 0.892 - - - - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
9. FBXL3 FBXL3 1769 1.664 - 0.744 - 0.920 - - - - -
10. pik3c3 ENSDARG00000054829 559 1.656 - - - 0.814 - - - 0.842 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
11. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.651 - - - 0.887 - - - - 0.764 immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
12. rims2a ENSDARG00000101606 1088 1.649 - - - 0.931 - - - 0.718 - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
13. nrg2a ENSDARG00000077818 854 1.636 - 0.814 - - - - - 0.822 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
14. fgf12a ENSDARG00000027957 143 1.63 - - - - - 0.769 - 0.861 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
15. fam172a ENSDARG00000052697 422 1.628 - - - 0.857 - - - 0.771 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
16. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.625 - - - 0.811 - 0.814 - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
17. arhgef7b ENSDARG00000073848 1249 1.623 - - - 0.896 - - 0.727 - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
18. zc3hc1 ENSDARG00000062651 1552 1.621 0.811 0.810 - - - - - - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
19. prkcbp1l ENSDARG00000011932 2714 1.62 - - - 0.864 - 0.756 - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
20. eif3d ENSDARG00000021257 1524 1.61 - 0.772 - 0.838 - - - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
21. rprd2a ENSDARG00000058089 743 1.607 - - - 0.765 - - - 0.842 - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
22. pnkd ENSDARG00000071032 447 1.607 - - - 0.843 - - - 0.764 - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
23. ndufaf4 ENSDARG00000077859 552 1.605 - - - 0.802 - - - 0.803 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
24. nck2b ENSDARG00000043361 908 1.604 - 0.707 - 0.897 - - - - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
25. CT573103.1 ENSDARG00000097550 950 1.603 - 0.749 - - - - - 0.854 -
26. dnajc18 ENSDARG00000056005 8084 1.6 - - - 0.844 - - - 0.756 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
27. ctdspla ENSDARG00000071673 1447 1.6 - - - 0.761 - - - 0.839 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
28. ANK1_1 ANK1_1 507 1.599 - - - 0.872 - - - 0.727 -
29. TTF1_4 TTF1_4 504 1.599 - - 0.737 - - - - 0.862 -
30. lppr3a lppr3a 1294 1.594 - - - 0.886 - 0.708 - - -
31. katnbl1 ENSDARG00000042522 1086 1.593 - 0.824 - 0.769 - - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
32. LDLRAD4 LDLRAD4 1237 1.59 - - - 0.887 - 0.703 - - -
33. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.579 - - - 0.843 - - - - 0.736 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
34. zgc:174688 zgc:174688 170 1.579 - - 0.712 - - - - 0.867 -
35. bcl2_1 bcl2_1 1185 1.575 - - - 0.801 - - 0.774 - -
36. mir130b 180 1.575 - - - - - 0.718 - 0.857 - microRNA 130b
37. inip ENSDARG00000028523 1925 1.57 - 0.703 - 0.867 - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
38. slc44a5b ENSDARG00000057419 534 1.566 - 0.745 - - - - - 0.821 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
39. pex16 ENSDARG00000058202 486 1.562 - - - 0.719 - - - 0.843 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
40. fam173b ENSDARG00000033451 513 1.555 - 0.704 - - - - - 0.851 - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
41. mettl17 ENSDARG00000103889, ENSDARG00000109400 239 1.545 - - 0.730 0.815 - - - - - methyltransferase like 17 [Source:ZFIN;Acc:ZDB-GENE-031118-203]
42. ddb1 ENSDARG00000074431 1054 1.541 - - - 0.800 - - - 0.741 - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
43. RNF4 ENSDARG00000090993 688 1.534 - 0.797 - 0.737 - - - - - ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]
44. zgc:110843 ENSDARG00000073845 940 1.53 - 0.755 - - - - - 0.775 - zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
45. plxna3 ENSDARG00000007172 1412 1.529 - 0.718 - 0.811 - - - - - plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]
46. ubtf ENSDARG00000035066 4070 1.528 - - - 0.794 - - - 0.734 - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
47. ttk ENSDARG00000041361 3911 1.504 - - - 0.792 - - 0.712 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
48. med19b ENSDARG00000009472 936 1.498 - - - 0.750 - - - 0.748 - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
49. sgcg ENSDARG00000038107 711 1.497 - - - - - - 0.783 0.714 - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
50. aspscr1 ENSDARG00000105321 595 1.495 - 0.779 - - - 0.716 - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
51. plk3 ENSDARG00000038754 1687 1.483 - - - - - 0.745 - - 0.738 polo-like kinase 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6134]
52. ZFHX3 ENSDARG00000103057 7759 1.473 - - - 0.770 - 0.703 - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
53. tmbim4 ENSDARG00000014361 2549 1.466 0.726 0.740 - - - - - - - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
54. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.461 - - - - - 0.741 - 0.720 - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
55. magi1b ENSDARG00000003169 2056 1.447 - - - 0.723 - 0.724 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
56. efnb2b_1 ENSDARG00000074050 1094 1.447 - 0.704 - 0.743 - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
57. CR388231.3 ENSDARG00000105601 2404 1.447 - - - - - 0.745 0.702 - -
58. mapk12b ENSDARG00000006409 2246 1.446 - - - 0.739 - - - 0.707 - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
59. si:ch211-13c6.2 ENSDARG00000027738 1521 1.438 - - 0.708 - - 0.730 - - - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
60. samd1a ENSDARG00000102810 1037 1.432 - - - 0.712 - - 0.720 - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
61. cpz ENSDARG00000075521 2356 1.426 - 0.708 - - - - - 0.718 - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
62. crebbpb ENSDARG00000104148, ENSDARG00000112452 1926 1.41 - - - 0.704 - 0.706 - - - CREB binding protein b [Source:ZFIN;Acc:ZDB-GENE-050302-102]
63. pmelb ENSDARG00000033760 206 0.95 - - - 0.950 - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
64. usp49 ENSDARG00000000229 706 0.946 - - - 0.946 - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
65. plagx ENSDARG00000036855 3768 0.946 - - - 0.946 - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
66. xpc ENSDARG00000039754 515 0.943 - - - 0.943 - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
67. lmo1 ENSDARG00000034504 260 0.942 - - - 0.942 - - - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
68. rx1 ENSDARG00000071684 247 0.942 - - - 0.942 - - - - - retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
69. PARD3B PARD3B 401 0.942 - - - 0.942 - - - - -
70. hes2.2 ENSDARG00000068168 197 0.941 - - - 0.941 - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
71. lhx9 ENSDARG00000056979 249 0.941 - - - 0.941 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
72. anapc7 ENSDARG00000063005 1139 0.939 - - - 0.939 - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
73. sfi1 ENSDARG00000053992 1075 0.938 - - - 0.938 - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
74. GPN1 ENSDARG00000043928 566 0.938 - - - 0.938 - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
75. ccnh ENSDARG00000007657 745 0.937 - - - 0.937 - - - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
76. gpm6bb ENSDARG00000001676 2005 0.936 - - - 0.936 - - - - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
77. marcksa ENSDARG00000004049 2518 0.936 - - - 0.936 - - - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
78. ppig ENSDARG00000044431 3427 0.935 - - - 0.935 - - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
79. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.934 - - - 0.934 - - - - -
80. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.934 - - - 0.934 - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
81. NHSL1 NHSL1 182 0.934 - - - 0.934 - - - - -
82. fam49a ENSDARG00000006672 939 0.934 - - - 0.934 - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
83. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 0.93 - - - 0.930 - - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
84. smo ENSDARG00000002952 6411 0.929 - - - 0.929 - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
85. SPTBN4_1 ENSDARG00000092624 473 0.928 - - - 0.928 - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
86. si:ch211-10a23.2 ENSDARG00000060656 471 0.928 - - - 0.928 - - - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
87. unc119b ENSDARG00000044362 1528 0.928 - - - 0.928 - - - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
88. nfil3-2 658 0.928 - - - 0.928 - - - - - nuclear factor, interleukin 3 regulated, member 2, transcript variant X1
89. mus81 ENSDARG00000069326, ENSDARG00000111800 400 0.928 - - - 0.928 - - - - - MUS81 structure-specific endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2923]
90. ttc14 ENSDARG00000013845 1192 0.926 - - - 0.926 - - - - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
91. TTF1_5 TTF1_5 705 0.925 - - - 0.925 - - - - -
92. rexo1 ENSDARG00000026986 770 0.925 - - - 0.925 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
93. znf710a ENSDARG00000014680 582 0.924 - - - 0.924 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
94. phf10 ENSDARG00000070084 1210 0.924 - - - 0.924 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
95. supt20 ENSDARG00000078658 713 0.923 - - - 0.923 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
96. DHX36 ENSDARG00000101059 314 0.922 - - - 0.922 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
97. dixdc1b ENSDARG00000056267 307 0.922 - - - 0.922 - - - - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
98. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 0.922 - - - 0.922 - - - - - RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
99. cwc27 ENSDARG00000043727 690 0.922 - - - 0.922 - - - - - CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1118]
100. ube2z ENSDARG00000029215 1059 0.921 - - - 0.921 - - - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]

There are 1301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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