Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rprd1b

Gene Name Gene ID Reads Annotation
rprd1b ENSDARG00000038113 1105 regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]










Genes with expression patterns similar to rprd1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rprd1b ENSDARG00000038113 1105 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
2. sf3b5 ENSDARG00000016855 4015 2.207 - 0.706 - - - 0.710 - 0.791 - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
3. fam213aa 1986 1.771 - 0.883 - - 0.888 - - - - family with sequence similarity 213, member Aa
4. ttll4 ENSDARG00000078935 1663 1.706 - 0.767 - - 0.939 - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
5. sugp1 ENSDARG00000075936 826 1.699 - 0.766 - - 0.933 - - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
6. cwf19l2 ENSDARG00000091760 1372 1.685 - - - - 0.904 - 0.781 - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
7. PRC1 PRC1 583 1.656 - 0.726 - - 0.930 - - - -
8. kdm5c ENSDARG00000006124 4389 1.653 - 0.744 - - 0.909 - - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
9. si:ch73-353p21.5 si:ch73-353p21.5 568 1.642 - 0.734 - - 0.908 - - - -
10. C8H5orf51 C8H5orf51 1199 1.641 - - - - 0.877 - 0.764 - -
11. pak2b ENSDARG00000018476 4331 1.64 - 0.725 - - 0.915 - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
12. rspry1 ENSDARG00000062558 1424 1.636 - - - - 0.849 - 0.787 - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
13. myoz2b ENSDARG00000037266 2139 1.632 - - - - 0.880 0.752 - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
14. rabgef1 ENSDARG00000014430 1176 1.607 - - - - 0.891 - 0.716 - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
15. scaf4a ENSDARG00000077093 2408 1.607 - - - - 0.839 - 0.768 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
16. abcf2a ENSDARG00000038785 2065 1.59 - - - - 0.877 - - 0.713 - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
17. zfand3 ENSDARG00000052833 2682 1.586 - - - - 0.834 - - 0.752 - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
18. lpl ENSDARG00000087697 2578 1.581 - - - - 0.810 0.771 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
19. ZNF337_25 ZNF337_25 1713 1.58 - 0.702 - - 0.878 - - - -
20. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.575 - - - - 0.866 - 0.709 - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
21. cd248b ENSDARG00000077938 2561 1.563 - 0.826 - - - 0.737 - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
22. thoc5 ENSDARG00000038290 1489 1.552 - 0.711 - - - - 0.841 - - THO complex 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3789]
23. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.551 - 0.767 - - - - 0.784 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
24. phax ENSDARG00000044298 2302 1.535 - - - - 0.806 - - 0.729 - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
25. med7 ENSDARG00000016318, ENSDARG00000109382, ENSDARG00000112244 796 1.519 - - - - - - 0.735 - 0.784 mediator complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4823]
26. MSL1_1 MSL1_1 2365 1.511 - - - - 0.782 - 0.729 - -
27. prkar1aa ENSDARG00000076128 6565 1.505 - - - - 0.739 - 0.766 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
28. mrps14 ENSDARG00000068305 1648 1.495 - - - - 0.788 - - - 0.707 mitochondrial ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-060825-75]
29. asap1b ENSDARG00000039729 842 1.495 - 0.749 - - - 0.746 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b [Source:ZFIN;Acc:ZDB-GENE-091112-16]
30. papola ENSDARG00000009585 9567 1.493 - 0.704 - - - - 0.789 - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
31. galnt1 ENSDARG00000061335 1648 1.488 - 0.782 - - - - 0.706 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
32. atf4b2 atf4b2 4734 1.486 - - - - 0.780 - 0.706 - -
33. u2af1 ENSDARG00000015325 3217 1.481 - 0.752 - - 0.729 - - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
34. dennd5a ENSDARG00000017006 3426 1.481 - 0.709 - - - - 0.772 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
35. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 1.474 - 0.703 - - - - 0.771 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
36. ppig ENSDARG00000044431 3427 1.454 - - - - 0.752 - 0.702 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
37. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.454 - - - - 0.748 0.706 - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
38. arid2 ENSDARG00000007413 4413 1.452 - 0.743 - - 0.709 - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
39. wwtr1 ENSDARG00000067719 3484 1.449 - - - - 0.716 - 0.733 - - WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
40. clgn ENSDARG00000009315 993 1.448 - 0.706 - - - - - 0.742 - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
41. vbp1 ENSDARG00000030241 10619 1.446 - 0.714 - - - 0.732 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
42. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.445 - 0.715 - - - - 0.730 - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
43. tsfm ENSDARG00000060748, ENSDARG00000110047 1003 1.442 - 0.733 - - - 0.709 - - - Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]
44. pdhx ENSDARG00000051756 924 1.442 - 0.718 - - - 0.724 - - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
45. popdc3 ENSDARG00000058551 538 1.44 - 0.728 - - - - 0.712 - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
46. tfip11 ENSDARG00000056932 479 1.438 - - 0.712 - - - - 0.726 - tuftelin interacting protein 11 [Source:ZFIN;Acc:ZDB-GENE-040718-479]
47. BX088524.2 ENSDARG00000103268 564 1.437 - 0.730 - - - - 0.707 - -
48. lrrc8a lrrc8a 674 1.434 - 0.724 - - - - 0.710 - -
49. pnkd ENSDARG00000071032 447 1.433 - 0.713 - - - - 0.720 - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
50. samd1a ENSDARG00000102810 1037 1.428 - - - - - 0.724 - 0.704 - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
51. bag6 ENSDARG00000075892 3782 1.407 - - - - 0.701 - 0.706 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
52. igsf9b ENSDARG00000010408 786 0.949 - - - - 0.949 - - - - immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
53. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 0.947 - - - - 0.947 - - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
54. wu:fb54a03 wu:fb54a03 1722 0.946 - - - - 0.946 - - - -
55. paf1 ENSDARG00000098432 1806 0.943 - - - - 0.943 - - - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
56. si:ch211-288g17.3 ENSDARG00000070959 2425 0.941 - - - - 0.941 - - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
57. nrn1a ENSDARG00000071860 1311 0.94 - - - - 0.940 - - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
58. dlg2 ENSDARG00000099323 162 0.937 - - - - 0.937 - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
59. cep72 ENSDARG00000105258 344 0.936 - - - - 0.936 - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
60. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 0.935 - - - - 0.935 - - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
61. si:dkey-183n20.2 si:dkey-183n20.2 210 0.933 - - - - 0.933 - - - -
62. utp23 ENSDARG00000105012 1346 0.932 - - - - 0.932 - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
63. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 0.931 - - - - 0.931 - - - - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
64. dct ENSDARG00000006008 2466 0.931 - - - - 0.931 - - - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
65. tpi1a ENSDARG00000025012 562 0.931 - - - - 0.931 - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
66. mycla ENSDARG00000006003 1866 0.93 - - - - 0.930 - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
67. smg5 ENSDARG00000041481 1286 0.93 - - - - 0.930 - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
68. im:7154842 im:7154842 434 0.929 - - - - 0.929 - - - -
69. GRIN2B GRIN2B 140 0.929 - - - - 0.929 - - - -
70. atf7b ENSDARG00000055481, ENSDARG00000114492, ENSDARG00000115171 2249 0.929 - - - - 0.929 - - - - activating transcription factor 7b [Source:ZFIN;Acc:ZDB-GENE-030131-3028]
71. mis18a ENSDARG00000035333 555 0.928 - - - - 0.928 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
72. si:dkeyp-106c3.1 ENSDARG00000090623 225 0.928 - - - - 0.928 - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
73. ect2 ENSDARG00000007278 1193 0.927 - - - - 0.927 - - - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
74. si:dkey-20l4.2 si:dkey-20l4.2 110 0.927 - - - - 0.927 - - - -
75. MTBP ENSDARG00000090447 174 0.927 - - - - 0.927 - - - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
76. si:ch211-69l10.2 169 0.927 - - - - 0.927 - - - - si:ch211-69l10.2
77. ddx27 ENSDARG00000091831 1471 0.927 - - - - 0.927 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
78. PEG3_38 PEG3_38 521 0.926 - - - - 0.926 - - - -
79. rwdd2b ENSDARG00000055426 294 0.926 - - - - 0.926 - - - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
80. zbtb20 ENSDARG00000005586 195 0.926 - - - - 0.926 - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
81. TTF1_5 TTF1_5 705 0.925 - - - - 0.925 - - - -
82. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 0.925 - - - - 0.925 - - - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
83. etv1 ENSDARG00000101959 358 0.925 - - - - 0.925 - - - - ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
84. ebp ENSDARG00000046098 502 0.925 - - - - 0.925 - - - - EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
85. TNRC6B ENSDARG00000074161 2464 0.925 - - - - 0.925 - - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
86. manf ENSDARG00000063177, ENSDARG00000114083 570 0.925 - - - - 0.925 - - - - mesencephalic astrocyte-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-060929-640]
87. pex12 ENSDARG00000035149 175 0.925 - - - - 0.925 - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
88. stub1 ENSDARG00000045228 105 0.925 - - - - 0.925 - - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
89. si:ch211-120j21.1 si:ch211-120j21.1 638 0.925 - - - - 0.925 - - - -
90. pigt ENSDARG00000075842 210 0.924 - - - - 0.924 - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
91. C2H14orf119 C2H14orf119 716 0.924 - - - - 0.924 - - - -
92. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.924 - - - - 0.924 - - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
93. lrp12 ENSDARG00000098845 999 0.924 - - - - 0.924 - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
94. LRRC30 LRRC30 83 0.923 - - - - 0.923 - - - -
95. BX571949.1 BX571949.1 293 0.923 - - - - 0.923 - - - -
96. KEL ENSDARG00000076950 159 0.923 - - - - 0.923 - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
97. fmnl3 ENSDARG00000004372 821 0.923 - - - - 0.923 - - - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
98. TTF1_3 TTF1_3 215 0.923 - - - - 0.923 - - - -
99. si:dkey-37o8.1 ENSDARG00000071727 64 0.923 - - - - 0.923 - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
100. eif3ja ENSDARG00000012603 6324 0.923 - - - - 0.923 - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]

There are 1063 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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