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Results for rpp40

Gene Name Gene ID Reads Annotation
rpp40 ENSDARG00000017605 63 ribonuclease P/MRP 40 subunit [Source:ZFIN;Acc:ZDB-GENE-040625-161]










Genes with expression patterns similar to rpp40

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpp40 ENSDARG00000017605 63 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease P/MRP 40 subunit [Source:ZFIN;Acc:ZDB-GENE-040625-161]
2. nek4 ENSDARG00000040152 147 1.831 0.862 - - - - 0.969 - - - NIMA-related kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1392]
3. tmem205 ENSDARG00000100677 101 1.688 - - - - - 0.970 0.718 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
4. trim25l ENSDARG00000020863 292 1.674 - - - - - 0.886 0.788 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
5. C2CD3 ENSDARG00000074137 51 1.66 0.791 - - - - 0.869 - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
6. chtopb ENSDARG00000070430 29 1.65 - - - 0.706 - 0.944 - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
7. SYTL1 ENSDARG00000070094 282 1.645 - - - - - 0.940 0.705 - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
8. ikbkb ENSDARG00000079123 498 1.634 - - - - - 0.830 0.804 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
9. slc6a4a ENSDARG00000061165 206 1.632 - 0.885 - - - - 0.747 - - solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
10. drd4a ENSDARG00000038363 82 1.619 0.724 - - - - 0.895 - - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
11. usp39 ENSDARG00000041908 501 1.591 - 0.759 - - - - 0.832 - - ubiquitin specific peptidase 39 [Source:ZFIN;Acc:ZDB-GENE-030131-966]
12. lss ENSDARG00000061274 68 1.584 - - - - 0.709 0.875 - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
13. ccdc120 ENSDARG00000032856, ENSDARG00000114382 808 1.561 - - - - - 0.778 0.783 - - coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
14. FAM3D ENSDARG00000091625 1392 1.557 - - - - - 0.704 0.853 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
15. SIPA1L3 ENSDARG00000061699 268 1.539 - 0.712 - - - - 0.827 - - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
16. si:ch211-179l5.5 si:ch211-179l5.5 249 1.497 - - - - - 0.752 0.745 - -
17. ndst2a ENSDARG00000086269 754 1.488 - - - - - 0.781 0.707 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
18. lrata ENSDARG00000037278, ENSDARG00000112503 1510 1.439 - - - - - 0.729 0.710 - - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
19. ccny ENSDARG00000063677 66 1 1.000 - - - - - - - - cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]
20. ccdc173 ENSDARG00000077928 260 0.99 - 0.990 - - - - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
21. taf1b ENSDARG00000028937 879 0.978 - - - - - 0.978 - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
22. ZBTB41 ENSDARG00000054984 464 0.972 - - - - - 0.972 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
23. cdc45 ENSDARG00000043720 353 0.968 - - - - - 0.968 - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
24. si:ch211-283e2.7 19 0.965 - - - - - 0.965 - - - si:ch211-283e2.7, transcript variant X2
25. BX323793.2 BX323793.2 61 0.965 - - - - - 0.965 - - -
26. CTIF ENSDARG00000090617 270 0.965 - - - - - 0.965 - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
27. MIER3 MIER3 114 0.963 - - - - - 0.963 - - -
28. KAT7 KAT7 178 0.962 - - - - - 0.962 - - -
29. crygm2d3 ENSDARG00000088823 1560 0.961 - - - - - 0.961 - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
30. ZNF648 ENSDARG00000104823 194 0.957 - - - - - 0.957 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
31. defbl1 ENSDARG00000075161 211 0.954 - - - - - - 0.954 - - defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
32. CR478286.1_1 CR478286.1_1 306 0.953 0.953 - - - - - - - -
33. si:ch211-114l13.11 si:ch211-114l13.11 4727 0.952 - - - - - 0.952 - - -
34. pnrc1 ENSDARG00000043904 74 0.952 - 0.952 - - - - - - - proline-rich nuclear receptor coactivator 1 [Source:ZFIN;Acc:ZDB-GENE-040724-189]
35. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.952 - - - - - 0.952 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
36. pcdh1b ENSDARG00000036175 101 0.952 - - - - - 0.952 - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
37. si:dkey-26g8.10 si:dkey-26g8.10 100 0.952 - - - - - 0.952 - - -
38. si:ch211-59m15.1 87 0.951 - - - - - 0.951 - - - si:ch211-59m15.1
39. APOA4_2 APOA4_2 61 0.951 - - - - - 0.951 - - -
40. rdh5 ENSDARG00000008306 272 0.951 - - - - - 0.951 - - - retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
41. spg21 ENSDARG00000007760 409 0.951 - - - - - 0.951 - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
42. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 0.951 - - - - - 0.951 - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
43. si:ch73-280o22.2 ENSDARG00000077072 67 0.95 - - - - - 0.950 - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
44. gbp2 ENSDARG00000038669 91 0.95 - - - - - 0.950 - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
45. oaz2b ENSDARG00000059815 38 0.949 - - - - - 0.949 - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
46. si:ch211-219f7.3 si:ch211-219f7.3 48 0.949 - - - - - 0.949 - - -
47. si:dkey-150k17.3 33 0.949 - - - - - 0.949 - - - si:dkey-150k17.3
48. si:ch73-367f21.6 ENSDARG00000089953 46 0.949 - - - - - 0.949 - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
49. CR384099.1 ENSDARG00000089193 193 0.948 0.948 - - - - - - - -
50. FAM132B FAM132B 39 0.948 - - - - - 0.948 - - -
51. si:ch211-241n15.2 si:ch211-241n15.2 435 0.948 - - - - - 0.948 - - -
52. suv39h1a ENSDARG00000026799 18 0.944 - - - - - 0.944 - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
53. CU633486.1 ENSDARG00000098008 3 0.944 - - - - - 0.944 - - -
54. BX004816.2 ENSDARG00000087012 3 0.944 - - - - - 0.944 - - -
55. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.944 - - - - - 0.944 - - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
56. cfhl1 ENSDARG00000105212, ENSDARG00000111582 35 0.944 - - - - - 0.944 - - - complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342]
57. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.944 - - - - - 0.944 - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
58. CABZ01057940.1 CABZ01057940.1 4 0.944 - - - - - 0.944 - - -
59. si:ch211-264f7.2 si:ch211-264f7.2 2 0.944 - - - - - 0.944 - - -
60. hephl1 hephl1 20 0.944 - - - - - 0.944 - - -
61. si:dkey-153n9.5 si:dkey-153n9.5 20 0.944 - - - - - 0.944 - - -
62. si:ch1073-263o8.2 ENSDARG00000090870 66 0.944 - - - - - 0.944 - - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
63. si:dkey-117i10.1 ENSDARG00000062537 3 0.944 - - - - - 0.944 - - - si:dkey-117i10.1 [Source:ZFIN;Acc:ZDB-GENE-091204-371]
64. si:dkey-201l21.4 ENSDARG00000076398 5 0.944 - - - - - 0.944 - - - si:dkey-201l21.4 [Source:ZFIN;Acc:ZDB-GENE-060531-98]
65. myo10l3 ENSDARG00000074143 49 0.944 - - - - - 0.944 - - - myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237]
66. CU104716.1 ENSDARG00000109332 12 0.944 - - - - - 0.944 - - -
67. CR848784.2 ENSDARG00000111157 16 0.944 - - - - - 0.944 - - -
68. BX664721.1 ENSDARG00000051804 21 0.944 - - - - - 0.944 - - -
69. si:dkey-263l8.2 si:dkey-263l8.2 3 0.944 - - - - - 0.944 - - -
70. si:ch73-103l1.2 ENSDARG00000096505 17 0.944 - - - - - 0.944 - - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
71. CT025771.1 ENSDARG00000117721 13 0.944 - - - - - 0.944 - - -
72. U6_26 U6_26 2 0.944 - - - - - 0.944 - - -
73. nceh1b nceh1b 22 0.944 - - - - - 0.944 - - -
74. GABRR3 GABRR3 3 0.944 - - - - - 0.944 - - -
75. msxa msxa 263 0.944 - - - - - 0.944 - - -
76. si:dkey-234l24.10 si:dkey-234l24.10 2 0.944 - - - - - 0.944 - - -
77. cd4 cd4 4 0.944 - - - - - 0.944 - - -
78. zgc:158580 zgc:158580 2 0.944 - - - - - 0.944 - - -
79. zgc:193682 zgc:193682 15 0.944 - - - - - 0.944 - - -
80. CABZ01073740.1 CABZ01073740.1 27 0.944 - - - - - 0.944 - - -
81. si:rp71-78h1.1 si:rp71-78h1.1 2 0.944 - - - - - 0.944 - - -
82. itk ENSDARG00000017565, ENSDARG00000113497, ENSDARG00000114923 4 0.944 - - - - - 0.944 - - - IL2 inducible T cell kinase [Source:ZFIN;Acc:ZDB-GENE-990415-261]
83. zgc:171452 ENSDARG00000074069 6 0.944 - - - - - 0.944 - - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
84. BX322657.1 ENSDARG00000102448 23 0.944 - - - - - 0.944 - - -
85. slco1f3 ENSDARG00000105691 6 0.944 - - - - - 0.944 - - - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]
86. nobox 5 0.944 - - - - - 0.944 - - - NOBOX oogenesis homeobox
87. BX571811.2 ENSDARG00000105655 11 0.944 - - - - - 0.944 - - -
88. GRAMD2_1 GRAMD2_1 12 0.944 - - - - - 0.944 - - -
89. BX537137.1 ENSDARG00000092436 77 0.943 - - - - - 0.943 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
90. LRRC45 ENSDARG00000014005 140 0.942 0.942 - - - - - - - - leucine rich repeat containing 45 [Source:ZFIN;Acc:ZDB-GENE-121214-317]
91. BX005423.3 BX005423.3 33 0.941 - - - - - 0.941 - - -
92. rp1 ENSDARG00000077687 18 0.941 - - - - - 0.941 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
93. npas3b npas3b 1446 0.94 - 0.940 - - - - - - -
94. spdya ENSDARG00000059131 33 0.94 - - - - - 0.940 - - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
95. actr2b ENSDARG00000070076 49 0.94 - - - - - 0.940 - - - ARP2 actin related protein 2b homolog [Source:ZFIN;Acc:ZDB-GENE-050410-4]
96. relb ENSDARG00000086173 762 0.939 - - - - - 0.939 - - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
97. AKAP12 AKAP12 140 0.938 0.938 - - - - - - - -
98. RPS6KA5 ENSDARG00000060551 109 0.937 - - - - - 0.937 - - - ribosomal protein S6 kinase, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-130530-693]
99. VPS72 11 0.935 - - - - - 0.935 - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
100. TERF2IP ENSDARG00000103977 216 0.932 - - - - - 0.932 - - - telomeric repeat binding factor 2, interacting protein [Source:ZFIN;Acc:ZDB-GENE-131121-641]

There are 873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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